| Id Trinity | FTRINITY_DN59079_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_146962 |
| Sequence | CTACTACTTCCTCTGATCTGCAATATTTTTACCACCTAAACCCTACTAATTAATTTCCCGCCTAGGACCTATAACCACTTGAACCTTCCATCTTTCTAAA AGACTCATCATTCCACAACACACGAACTCACTCAACCATTTTCTCATTTCCTCTCTCTCTCTCTCGCTTTCTCTAGGGTTTCGTAACCGCCATGGTTTCT CCGAAGCAGCTTCTATCCACACTCGAATCAGCGCTTCTCGGACCTTCGCCTCCGACTGCGGCGCAACGCGTCGAACTCTTGCACGCTATTCGCACTTCCT CCCGTTCATTCCAATCCCTTCTATCCTATCTGCCTCCAAAGTCCTCCGATCGAAGTCAAGTTCAGTCAAAATCAGTTAGGCTTCCAGATTCTTCGCCTAT CTCTCTTGATGATCAAGATGTCCAAATTGCACTCAAATTGAGTGATGACCTCCATCTCAATGAAGTAGATTGCGTTCGCTTGCTTGTATCAGCTAATCAA GAGAGGGGCTTAATGGGAAGGGAACCTCTGGAAATTCTACGGCTTGCAGCGGGGCTCTGGTATACAGAGAGAAGAGATCTGATAACATCCCTCCATTTGC TGTTAAGGGCTGTGGTGCTTGATCAGGGTCTTGAAGATGATATATTGGTTGACATTCAGAAATATCTGGAAGATCTTATCAATTCTGGACTAAGACAGCG GTTGATTTCTCTTATCAAGGAACTCAATAGAGAAGATTCTTCTGGTTTGGGTGGTCCCCAGTGTGAGCCTTACATTCTTGATTCAAGAGGTTCTCTTGTG GAGCGGCGGGCAGTGGTCTCTAGAGAAAGACTTATTATTGGACATTGCCTTGTCCTTTCAGTTTTGGTTGTTCGGACAAGTCCAAAGGATGTGAAGGATA TTTTTTCTGTTTTAAAAGATTGTGCTTCCGAAGTCAGTGTGTGCAATACCACGGTAAAACATCAGATTACCTTCAGTCTTCTTTTTGCTCTTGTGGTTGC ATTTGTTTCAGATGGTTTGAGTACAGTGCCGGATAAAGCATCTATACTTTCTTCTGATGCTTCCTTCAGACGTGAATTTCATGAACTTGTAATGGCTACC GGAAATGATCCAGTTGTTGAAGGCTTCATTGGTGGCATTAGACTTGCTTGGGTGGTACATTTGATGTTAATACAAGATGGTGTTGCAGCAAGGGAGACTG TTTCAAGTGGTTCATCAAATGAAATGGGTTATCTCAGTCAATGCTTGGATGTCATTTTCTCAACTAACAGTTTTCAATTTTTATTGGACAAAGTTCTTCA CACAGCTTCTTACCAGAATGAAGATGAAGATATGATCTACATGTATAATGCTTATCTTCACAAGCTGATCACCTGCTTCTTGTCTAATTCACTTGCGAGA GACAAGATAAAAGAATCCAAGGAGCGGACAATGAGTGTGCTTAGTCCATACCGAGTTGTTGGATCACATGATTTTGCACAGGACAGGAACTCAAGTTCTC AACATGGCTCTGACATGGGTGCTTTAACATTTAATTCAATATTGGACTTTGTGAGCGAAATTTATCAGAAAGAACCAGAGCTGTTGTCTGGAAATGATGT GTTGTGGACATTTGTAAATTTTGCCGGAGAAGACCATACAACCTTCCAAACACTTGTGGCTTTCTTAAATATGCTGAGCACCTTGGCTTCTAGTCAAGAA GGTGCTTCTAAGGTTTATGAGTTGCTGCAAGGTAAAGCATTCCGCTCAATTGGGTGGAGCACTTTGTTTGAATGCTTAACAATTTATGATGATAAATTCA AACAGTCTCTTCAAACTGCTGGAGCGATGTTGCCTGACATTCAGGAGGGGGATGCAAAAGCCCTCGTGGCATACTTAAATGTTCTGAAGAAGGTTGTAGA AAATGGGAACCCAATAGAAAGGAAAAACTGGTTTCCTGATATTGAACCATTGTTCAAGCTTCTTAGTTACGAAAATGTACCCCCATATCTTAAGGGTGCT CTACGGAATGCAATAGCCACATTTATTCATGTCTCTCCAGTGTTGAAGGATAGCATTTGGACCTATCTTGAACAATATGACCTGCCAGTAGTTGTTGGGA CAAATGTCCAGAATACTCAACAACCCGTGGGTACTCAGGTTTATGATATGCAATTTGAATTGAACGAAATCGAAGCAAGGAGAGAGCAATATCCTTCAAC TATATCTTTTCTTAATTTGATAAATGCTCTTGTTGCAGAAGAAAGAGATTTGAGTGATAGAGGGCGAAGATTTATTGGCATATTTAGGTTCATATATGAT CATGTTTTTGGGCCATTTCCTCAGAGAGCCTATGCAGATCCTTGTGAAAAGTGGCAGTTGGTTGGTGCTTGCCTTCAACATTTTCGCATGATATTAACCA TGTATGATGTCAAGGATGAGGACTTTGAGGGTATAGTTGACCAGTCACGACTTTCAACAACGAAAGAATCATCACCACTTCAGACACAACTTCCTGTATT AGAATTGCTTAAAGATTTCATGAGTGGTAAGACTGCATTTCGGAACATTATGGGTATTCTTCTACCAGGAGTGAATTCCATCATTGCTGAACGCAGTAGT CAAATATATGGGCAGCTTTTGGAGAATGCAGTTCAGCTTTCTCTGGAAATTATAATACTAGTGCTTGAAAAAGATTTACTTCTTTCTGATTATTGGCGTC CTCTATACCAGCCATTGGATATTATACTCTCCCATGATCACAATCAAATAGTGGCTTTGTTGGAGTATGTCAGATATGATTTTCAGCCTAAAGTTCAGCA GTCCTCTATCAAAATCATGAGTATTTTAAGCTCTCGCATGGTTGGGCTCGTTCAGCTATTGCTAAAATCTGGTGCTGCAAATAGCTTGATAGAAGATTAT GCAGCATGCCTTGAGTTGCGGTCAGGAGAGTGTCAGACTGTTGAAAATAATACTGATGATCCAGGCATTCTTATCATTCAACTTTTAATCGACAACATCA GCAGGCCAGCTCCAAATATCACCCATTTACTACTTAAATTTGATCTTGACATGCCTGTTGAACGGACAGTTTTACAGCCTAAGTTTTATTACAGTTGCAT GAAGGTTATTCTTGATATCCTGGAGAACCTTTTAAAGCCTGATGTAAATGCATTACTTCATGAATTTGGTTTTCAGCTCCTTTATGAGTTATGCGTAGAT CCACTAACATGTGAGCCAACAATGGATCTGTTGTCAAATAAAAAGTACCATTTCTTTATTAAGCACCTTGATGCAATTGGTATTGCTCCGCTTCCCAAAC GGAATAGTAACCAGCCACTCCGTATCAGTTCCCTCCATCAGAGAGCTTGGCTCCTAAAACTTTTAGCCGTTGAACTACATGCTGGTGATGTTAGTAGCTC CGCACATAGAGAAGCATGTCAAACAATCCTTTCTCATCTTTTTGGGCAAGATGTCCTTAAAATTGATGGTGGTCAGGCCATGTCTCCATTTTCGCTTCAA GCTACATATGAAAATGCTGGTATAAGAACTGTCAGTAAGAGTAAGGTATTAGAATTGCTTGAAATCATTCAGTTTAGATGTCCAAATACCTCTACTAAGC TCTCAAATATTGTGGCTGGTATGAAGTATGACTTGCTGGCTGAAGACATACTTGGAAATCCTGGAAATTCTGGAAAGGGCGGTGTCTACTATTTTTCTGA GAGAAATGACCGTCTAATTGACCTTGCTTCCTTCCATGACAAACTTTGGCAGAAATATAATTCTGCATATATCCAGGTGAGTAACCTGGGCAGTGAAGTT GAGCTAAATGACGTACGGGAGACAATTCAACAGTTGCTGAGATGGGCTTGGAAATACAATAAAAATCTGGAGGAACAAGCAGCACAGCTACATATGGTTA CTGCCTGGTCTCAGATTGTTGAGGTTTCTGCTTCTAGAAGATTAACCATGCTTGAAGGTCGATCTGAAATTCTATTTCAGGTCCTTGATGCATCTCTTAG TTCTTGTGCATCTCCAGACTGTTCATTGAGGATGGCGTTCATACTATCACAGGTCGCATTGACATGCATGGCTAAACTACGAGATGAAAGGTTTTTATTC CCGGGCAGTCTGAATTCTGATAATATCACGTGCCTTGATCTCATTGTGGTGAAGCAATTACCGAATGGTGCTTGTCTAACCATATTGTTTAAGCTTATTA TGGCAATACTAAGAAACGAGTCATCAGAAGCTCTTCGGAGACGTCAATATGCCTTGCTTCTTAGCTATTTCCAGTATTGTCAAAATGTGGTAGATCCAGA TGTTCCAACCACAGTTCTTCAATTCTTGCTGCACATTGAACAAGATAATGAGTATATTGATCTACCAAAGATTGACAAAGATCAAGCAGAACTGGCTCGT GCAAATTTTTATACTTTAAGGAAAGAGGCTCAGAGCGTCTTGGATTTGGTCATAAAAGATGCAACCCATGGCAGCGAACCGGGAAAGACAATATCACTCT ATGTTCTTGATGCATTGATTTGTATAGATCATGAGCGGTATTTCTTGAACCAGCTTCAAAGCAGGGGCTTTTTAAGGTCTTGCTTTACAGCCATAAGCAG TGTTTTGAATCAGGATGGTGGTCTTTCACTGGACTCATTGCAGAGGGCTTGTACCTTTGAGGCTGAACTTGGTTTACTACTAAGAATAAGTCACAAATAT GGGAAATCAGGAGCACAAGTACTACTTTCTATGGGTATACTGGAGCATCTTTCTTCTGGAAGGGTAATCAATTTACAGGGTGGTTTAAGGAGGGTTGAGA CGAGACTTAGAAGAGATATGGCTGTCGATGTTGATAGACAGCGAATGATTGTAACTCCTATTTTGAGATTGGTCTATTCATTAACTTCCTTGGTTGATAC CTCAGAGTTTCTTGAGGTTGGCTTTTGTTTTTCCTTTACAAGTTTTTAGCATTAATACTTTTCTTGCTCCCTATTAGAATGTAATAGAGAATTAGGTCTA TGTAATTTCAGTTTGTTTGATATTAGTCTAGCTAAGGTGTGCCAGCTGTAATAACTTTCCCCTTATCTCTATATATAGAGATCATTTCATTCATAAAGAC AATTATTCAATAATAAGAAAGGCAGATACGGTTCAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_82632; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_146962
| Blastp | Nuclear pore complex protein NUP205 from Arabidopsis with 66.41% of identity |
|---|---|
| Blastx | Nuclear pore complex protein NUP205 from Arabidopsis with 66.35% of identity |
| Eggnog | nuclear pore complex protein(ENOG410XSBR) |
| Kegg | Link to kegg annotations (AT5G51200) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417064.1) |
| Pfam | Nuclear pore complex scaffold, nucleoporins 186/192/205 (PF11894.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |