| Id Trinity | FTRINITY_DN59079_c0_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_146967 |
| Sequence | TTTAGAGATTCTTGCCCATCTCCTTTTCCCTAAAATCTCCAACCTTTTCCACCAAAACCCTACTCCTTCATTTCCCGCCCTACACAAATAAACCCTTGAT GAAGCTTCCATCTTCTCCTTGAGCCAGCGCCCCACAACACCACACCACACCACACCAAACCCTTTTTCTCATTTCCCTCTCTCACATTGTTTCATCACTG CCACGTGGCACCATGGTTTCTCCGAAGCAACTCCTCTCCACACTTGAATCAACGCTTCTCGGACCTTCGCCTCCAACCGCCGCGCAGCGCGTCGAACTCT TGCACGCTATTCGCACTTCTTCACGTTCCTTCCAATCTCTTCTATCCTATTCGGACCCTAAGTCCTCTGATCTAAGTCAGGTTCAGTCTAAATCAGTTAG GCTTCCAGATTCTTCGCCTATCTCTCTCGATGACCAGGATGTCCAAATTGCACTCAAATTGAGTGATGATCTCCATGTCAATGAAGTAGATTGTGTTCGC TTGCTTGTATCAGCTAATCAAGAGTGGGGCTTAATGGGAAGGGGACCACTGGAAATTCTACGGCTTGCAGCGGGGCTCTGGTATACAGAGAGAAGAGATC TGATAACATCCCTCCATTTGCTGTTAAGGGCTGTGGTGCTTGATCAGGGTCTTGAAGATGATATATTGGTTGACATTCAGAAATATCTGGAAGATCTTAT CAATTCTGGACTAAGACAGCGGTTGATTTCTCTTATCAAGGAACTCAATAGAGAAGATTCTTCTGGTTTGGGTGGTCCCCAGTGTGAGCCTTACATTCTT GATTCAAGAGGTTCTCTTGTGGAGCGGCGGGCAGTGGTCTCTAGAGAAAGACTTATTATTGGACATTGCCTTGTCCTTTCAGTTTTGGTTGTTCGGACAA GTCCAAAGGATGTGAAGGATATTTTTTCTGTTTTAAAAGATTGTGCTTCCGAAGTCAGTGTGTGCAATACCACGGTAAAACATCAGATTACCTTCAGTCT TCTTTTTGCTCTTGTGGTTGCATTTGTTTCAGATGGTTTGAGTACAGTGCCGGATAAAGCATCTATACTTTCTTCTGATGCTTCCTTCAGACGTGAATTT CATGAACTTGTAATGGCTACCGGAAATGATCCAGTTGTTGAAGGCTTCATTGGTGGCATTAGACTTGCTTGGGTGGTACATTTGATGTTAATACAAGATG GTGTTGCAGCAAGGGAGACTGTTTCAAGTGGTTCATCAAATGAAATGGGTTATCTCAGTCAATGCTTGGATGTCATTTTCTCAACTAACAGTTTTCAATT TTTATTGGACAAAGTTCTTCACACAGCTTCTTACCAGAATGAAGATGAAGATATGATCTACATGTATAATGCTTATCTTCACAAGCTGATCACCTGCTTC TTGTCTAATTCACTTGCGAGAGACAAGATAAAAGAATCCAAGGAGCGGACAATGAGTGTGCTTAGTCCATACCGAGTTGTTGGATCACATGATTTTGCAC AGGACAGGAACTCAAGTTCTCAACATGGCTCTGACATGGGTGCTTTAACATTTAATTCAATATTGGACTTTGTGAGCGAAATTTATCAGAAAGAACCAGA GCTGTTGTCTGGAAATGATGTGTTGTGGACATTTGTAAATTTTGCCGGAGAAGACCATACAACCTTCCAAACACTTGTGGCTTTCTTAAATATGCTGAGC ACCTTGGCTTCTAGTCAAGAAGGTGCTTCTAAGGTTTATGAGTTGCTGCAAGGTAAAGCATTCCGCTCAATTGGGTGGAGCACTTTGTTTGAATGCTTAA CAATTTATGATGATAAATTCAAACAGTCTCTTCAAACTGCTGGAGCGATGTTGCCTGACATTCAGGAGGGGGATGCAAAAGCCCTCGTGGCATACTTAAA TGTTCTGAAGAAGGTTGTAGAAAATGGGAACCCAATAGAAAGGAAAAACTGGTTTCCTGATATTGAACCATTGTTCAAGCTTCTTAGTTACGAAAATGTA CCCCCATATCTTAAGGGTGCTCTACGGAATGCAATAGCCACATTTATTCATGTCTCTCCAGTGTTGAAGGATAGCATTTGGACCTATCTTGAACAATATG ACCTGCCAGTAGTTGTTGGGACAAATGTCCAGAATACTCAACAACCCGTGGGTACTCAGGTTTATGATATGCAATTTGAATTGAACGAAATCGAAGCAAG GAGAGAGCAATATCCTTCAACTATATCTTTTCTTAATTTGATAAATGCTCTTGTTGCAGAAGAAAGAGATTTGAGTGATAGAGGGCGAAGATTTATTGGC ATATTTAGGTTCATATATGATCATGTTTTTGGGCCATTTCCTCAGAGAGCCTATGCAGATCCTTGTGAAAAGTGGCAGTTGGTTGGTGCTTGCCTTCAAC ATTTTCGCATGATATTAACCATGTATGATGTCAAGGATGAGGACTTTGAGGGTATAGTTGACCAGTCACGACTTTCAACAACGAAAGAATCATCACCACT TCAGACACAACTTCCTGTATTAGAATTGCTTAAAGATTTCATGAGTGGTAAGACTGCATTTCGGAACATTATGGGTATTCTTCTACCAGGAGTGAATTCC ATCATTGCTGAACGCAGTAGTCAAATATATGGGCAGCTTTTGGAGAATGCAGTTCAGCTTTCTCTGGAAATTATAATACTAGTGCTTGAAAAAGATTTAC TTCTTTCTGATTATTGGCGTCCTCTATACCAGCCATTGGATATTATACTCTCCCATGATCACAATCAAATAGTGGCTTTGTTGGAGTATGTCAGATATGA TTTTCAGCCAAAAATTCAGCAGTCCTCTATCAAAATCATGAGTATTCTAAGCTCTCGGATGGTTGGGCTCGTTCAGCTATTGCTAAAATCTAATGCTGCA AACAGTTTGATAGAAGATTATGCAGCCTGCCTTGAGTTGCGGTCAGAAGAATCTCAGACAGTTGAAAATAACACTGATGATCCAGGCATTCTTATTATGC AACTTTTAATTGACAACATCAGCAGGCCAGCTCCAAATATCACTCATTTACTACTTAAATTTGATCTAGACATGCCTGTTGAGCGAACAGTTTTACAGCC TAAGTTTTATTACAGTTGCATGAAGGTTATTCTTGATATCCTGGAGAACCTTTTAAAGCCTGATGTGAATGCATTGCTTCATGAATTTGGTTTTCAGCTA CTTTATGAACTATGCATTGATCCACTAACATGTGAACCTACAATGGATTTGTTATCAAATAAAAAGTACCATTTCTTTATTAAGCACCTTGATACAATTT GTATTGCTCCACTTCCTAAACGGAATAGTAACCAGCCTCTTCGTATCAGTTCGCTTCATCAGAGAGCATGGCTTTTAAAACTTTTAGCTGTTGAACTACA TGCTGGTGATGTTAGTAGCTCCGCACATAGAGAAGCATGTCAAACAATCCTCTCTCACCTTTTTGGACAAGATATGCTTGAAATTGGTGGAGGGCAGGCT ATGTCTCCATTTTCGCTTCAAGCTACTTATGAAAATGCTGCTATAAGAACTGTCAGTAAGAGTAAGGTATTAGAATTGCTAGAAATTATCCAGTTTAGAT GTCCAGATGCTTCTAAGCTCTCAAATATTGTGGCTGGTATGAAGTATGACTTGCTGGCTGAAGACATACTTGGAAATCCTGGAAATTCTGGAAAGGGTGG TGTCTACTATTATTCGGAGAGAAATGATCGTCTAATTGACCTTGCTTCCTTCCATGACAAACTTTGGCAGGCAAGTAACCTAGGCAATGAAGTTGAGCTA AACGATGTACGAGAGACAATTCAACAGTTGCTGAGATGGGGGTGGAAATACAATAAAAATCTGGAGGAACAAGCTGCACAACTACATATGGTTACTGCCT GGTCTCAGATTGTTGAGGTGTCTGCGTCAAGAAGATTAGCAATGCTTGAAGATCGATCTGAAATTCTATTCCAGGTTCTTGATGCATCTCTTAGTGCTTG TGCGTCTCCCGATTGTTCATTGAAGATGGCATTCATATTATCACAGGTAGCGTTGACATGCATGGCTAAACTACGAGATGAAAGGTTTTTGTTCCCTGGC AGCCTGAGTTCTGATAATATCACGTGCCTGGATCTCATTGTGGTGAAGCAATTATCCAATGGTGCTTGTCTGACCATATTATTTAAGCTCATTATGGCAA TTCTTAGAAATGAATCATCAGAAGCTCTTCGGAGACGTCAATATGCCTTGCTTCTTAGCTATTTCCAGTATTGTCAAAATGTGGTTGATCCAGATGTTCC AACCACAGTGCTTCAATTCTTGCTGCTCAGTGAACAAGATAATGAATACATTGATCTGCCAAAGATTGACAAAGAGCAGGCAGAATTGGCTCGTGCAAAT TTTTCTACTTTAAGGAAAGAGGCTCAAAGCATCTTAGATTTGGTCATAAAAGATGCAACCCATGGCAGCGAACCGGGAAAGACAATATCACTCTATGTTC TTGATGCATTGATTTGTATAGACCATGAGCGATATTTCCTGAACCAGCTTCAAAGTAGGGGCTTTTTAAGGTCATGCTTTACAGCCATAAGCAGTGTTTC AAATCAGGATGGTGGTCTTTCACTGGACTCATTGCAGAGGGCATGTACCTTTGAGGCTGAACTTGCATTACTACTAAGAATTAGTCACAAATATGAGAAA TCAGGAGCACAGGTACTATTTTCTATGGGTATACTGGAGCATCTTTCTTCTGGAAGGGTAATCAGTTCACAGGGAGGTTTAAGGAGGGTTGAGACAAGAC TTAGAAGAGATATGGCTAACGACATTGATCGACAACGAATGATTGTAACTCCCATTTTGAGATTAGTCTTTTCGTTAACTTCCTTGGTTGACACATCGGA GTTTTTGGAGATGAAGAATAAAATTGTTGGTGAAATAATTGATTTTGTCAAAGGGCATCAACCACTCTTCGATCATATTCTCCGTGTTGACATTGCTGAA GCAGATGACTTGAGAATGGAGCAGATCAATCTAGTTGTTGGTATTCTTAGCAAGATTTGGCCCTATGAAGAAAGCAGCGAGTATGGTTTTGTTCAAGGGC TGTTTGGCATGATGCATGCTCTTTTCTCTCGTGACTTGAAGGTTTCTAGTTTTGCTCAATCAATATCACCTAAGAATCAGAGGAATTCAGAACTACAGAT GTTTAAGTTATGCTTCAGCCTGAGTTCTTACTTATATTTTCTGGTCACAAAGAAATCATTGAGGTTGCAGTCTTCAGATGCCACCTCCAGTTACCCAACT TCCGTTGAACTTCAACAACCCACATTGAGCTTGCTTAATTCCCTTCTCACTTCTGTTACAACTGCACTTGAAAGGGCTGCTGAGGAAAAATCACTACTAC TGAATAAGATACGAGACATAAATGAATTGTCAAGGCAAGAGGTGGATGAAATCATCAATATGTGTGTGCAGCAAGACTATGTTCCATCTTCAGACAACAT ACATAAAAGGAGATACATTGCAATGGTAGAAATGTGTCAAGTTGTTGCTAGTTGGGATCAACAAATCATTTTGTTACTCCCTCTCTCTGAACATGTGCTG AATATCATCCTCATTCATCTTCAAGAGAGCTGTGTTGCATCTGATTCTACTTTGACCACAAAAACAATTGCATACGGTGCGAAGTATGATCCGAAACAGG ACGTCGCGTTTTTATGTGGAAAGTTAGTTCCAGACCTTGAACGACTCGAGTTACTGAGTGAGGACAAAATTGGGCGCAATCTCAAAGTATTCCACAGATT AGTAAGTTCTGCTAAAGATGTAGCAATTCAAAAGTTGGTTTTGTAGGTATATCAAATTATCCGCACACATCCAATTTTTTCCTTTAATTAACTGCTTGTG TTGTAAAATGTATCAATCTGTAAGATGTGCTCTTTAATTAGTTCTCGAGCGAGACTTGTATGATGGGTGATGTTATATCCTGTTTAATCTTGGTATATTT AAGTAGAAGTTTATGCACAATATTATATTTTACATATATCGTTGCAAAGATATGAAAGTGGGGTTGCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_82632; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_146967
| Blastp | Nuclear pore complex protein NUP205 from Arabidopsis with 66% of identity |
|---|---|
| Blastx | Nuclear pore complex protein NUP205 from Arabidopsis with 65.94% of identity |
| Eggnog | nuclear pore complex protein(ENOG410XSBR) |
| Kegg | Link to kegg annotations (AT5G51200) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417065.1) |
| Pfam | Nuclear pore complex scaffold, nucleoporins 186/192/205 (PF11894.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |