| Id Trinity | FTRINITY_DN59086_c4_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_146537 |
| Sequence | AGAAAGTAGTGAGTTTAACCGAACACAAAGCACAGAGCAACAACAACAATGGCATCGTCATTCGTCAAACTCGATGATTCTCCAATGTTCCAGAAGCAGT TATTTTCTCTTGAAGAAACGACTGACGAGTTAAAGGACCGGTGCCAGAAACTATTTAAAGGGTGTAAGAAGTTTATGACAGCTTTGGGGGAACAATATAA TGGGGAAATTTCCTTTGCTGATTCATTAGAAGCATTTGGCGGTGGCCAGGATGACCCTGTTAGTGTATCAATTGGAGGGCCGGTCATATCTAAGTTTATT ACCACACTGCGTGAGCTAGCTAGTTTTAAAGAGCTTCTCCGTTCACAGGTAGAGCACGTGTTGATTGACCGGCTGGCGGAGTTTATGACTGTTGATTTGC AAGATGCAAAGGACTCTCGCCGCCGTTTTGACAAAGCTGTGAATTCTTATGATCAGTCACGAGAGAAGTTTGTGTCCTTGAAGAAAAATACCCCGGGAGA CATTGTCGCTGAATTAGAAGAGGTTTGCTTCATCAATTTGTCAATGATTAGTAATTTCTAAAAATTGACGCATAATTTAATTGATATCTACTCTAGAATT TGTTTCATATTTTATTGCTTTAATAAAAAATCTATTAGTGTCTTTTTATTGGTGCATTAAATTAATTAATATTGTCAATGAATGTTGAAGTAAGTAGTAG CTCATTTCTGGCTGAAGCTTTAGTTCTGTATTTAGGTATGAAAGGTTGATTAAGTTTCACAATTTTTATTCTCTTCATTCTTTGTCCACTTTTTCTTTTT TGTTTGACTCCGCCTTGGATAATTCATTTTGCCTTCTTGATGATTGATTTGAGTTTGAAGTGTATCACTCATATATCCAAATCTTTGACCAATCAGTATC GTAAAAGGATAAAACGTGCTGTGTAATATCTTAGCTATATGTAAATTTAGTGGGCAGTATTATGGACCCATTATGTAGACATGTATTTCCAGCAAGAGCT GTCTTATTGTTTAGAGCCTCCATGCAATAGAGGGTCTACTGTCATGGAGCAAGGCCTTTTAATCTATTTTATTACCTTGTTGATCTTGATTCATGGATGA CTTAAATATTTGTTCACATTGCCATCTAATTCATCATGTTCTCATCTATTATTTATTGTTAAATAGCATATTCTTTCACAGATATTTGTGATTCAAACTT ATTTAATCAATCATCTCACTATTCTGATCCCGGACAGGATCTACAAAATTCAAAGTCAGCATTTGAAAAAAGTCGCTTCAATCTAGTATGTCTTCTACAA TTATGGACCTTTTCTCTGTGTCGTTTGCTGACATCTCCACCATTGTTTTTATTTATGAACCTGGTTATTGGGTTTTAAGGAGTGCAGGTGAACTCGCTCA TGAATATTGAAGTGAAAAAGAAGTATGAGTTCTTGGAGTCCGTTAGTGCAATAATGGATGCTCATCTGAGATACTTTAAGTTGGGTTATGAGTTACTGAG CCAAATGGAGCCTTATATTCACCAGGTGCTAACATATGCTCAACAATCTAAAGAAATGGCTAATATCGAGCAAGATAAGCTTGCAAAACGAATCCAGGAA TACCGAACCCAGGCCGAGCTGGAAAATACACGAGCTTCTTGCAATACAGAACCCTTGCCAAATGCTGATGGCACCCATGTTGTAGGCTTGAACTCTTATA GAAGTTTTGAATCAGGGATGCAGCCTGAAACCAAGGGCGAGGTTCAAACAGTTAAACAGGGCTATCTGTTGAAACGATCATCAAGCTCGCGTGGAGATTG GAAACGGAGGTTCTTTGTACTTGATAACCGAGGGAGTTTGTATTATTACAGAGTGAAAGGAGGCAAACCCATGGGCTCTCAGTCATATCATTATACTCGT TCTGGTGAACAAAACAGTGGCATGTTTGGTAGATTTCGTTCAAGGCACAACAGGGCAGCATCGCTAAATGAGGATATTTTGGGTTGCTGTACAGTTGATC TGTGCACATCCACTATAAAGATGGATGCAGAGAATACAGATCTACGACTTTGCTTCCGTATTATTTCTCCCTCGAAGTCATATACACTGCAGGCTGAAAA TGAAGCTGATAGGATGGACTGGGTAAACAAAATAACTGGAGCCATCACATCGCTTTTTAATTCTCAGTTTCTTCAGCCTCATTATGGTAGATTACATTTT GAAAATAAAAGCTCAGAAGGTGGTGCTTCCTTAGCTAGCCAAACAGAGGATAGTAATATATCTCTGATGGAAGTGGTTAGTGTCTCCAAGATTTTAAGGG GAATTCCTGGGAATGGTATATGTGCTGAATGCAGTGCTCCTGAACCAGAATGGGCATCTCTAAATCATGGCATATTACTGTGTATTGAATGCTCTGGGGT GCATCGAAATATTGGAGTTCATGTCTCCAAGGTGAGATCATTAACATTAGACGTTAGAGTTTGGGAACCTACTGTTTTGGAGTTATTTGATAACTTGGGT AATGCTTATTGTAATTCTATCTGGGAGGGCTTGCTTGTAGTTGATGATGAAAGAGTAGCTGAGTCAAATGCGCCTATGAAACCATGCCCCACAGATGCCT TCCAATACAAGGAAAAGTACATTCAAGCAAAGTATGTAGAGAAATCACTAATCATCAGGGAAGAGGATACACCCGGGAATCCTTCACTTCCCACAAGAAT CTGGCAAGCAGTTCAAGCTATAAATGTACGAGAAGTGTATCGCCTTATTGTTACATCAAATTCAAATCTGATAAACACGATATATGATGACGTGGTTAAA GATTTGAACTTAGGACCTATGAACGAAGGGCATCAGCATGATCCTGAAGCCTGTCTGAGAATTGAAGAGACTAATGAGACTAATAGGTGTTTCCGTGGAT GGTCATTATTACATCTGGCATGTCATTCTGACAGTGCACTAATGATCGAGTTGTTGCTCCAATTTGGTGCTGATGTAAACATGTGTGACTATCATGGAAG GACTCCCTTGCACCATTGCATTTCTAGTGGGAAGAACCCATTGGCAAAGTTTCTATTGAGAAGGGGTGCTAAACCATCAGTGAAAGATGCTGGTGGACTC AGTGTACTTGAAAGAGCAATGGAGATAGGAGCAATAAATGATGAAGAGCTATTTATCAAGCTTGCTGAATGCCAGTAAAAATTGAACTGGTATATGTATT TTGTTAAGAGTGCTGATGATAAGTTGTTGTTTGTGATTTTTATCTAGGATAGGAAGTTCATTGATTTTAGCATGCATGCCCATTCCACCAAAAAGGAACT TCATTGTGATTTTAGCATACATTGTTGCAATTGGTTAATATGCCAATGGCCATGCTGCAAAACGTTATGGGTTTGCTATTATTGCTTCATTTTCATTGGA TTTTAATTTTCTTGCATACTATTACTCCTTCTCCCCAACAATATTTTCAATAAGGTGTGTGGCTGCTTCCGAAACAAGTGTTGCTCTTAGGATTTAGTAA GGTTTTATACCATTAGACCAACACTTTGTTTATACATGTAATATGTTTATTTTTGTTTTTTGTACAACCAAGACCCTTCATCTTATGGGTAAAGAATTAA TCTCACATCGAGATGCATAGTATTAGTTGCTCATCCCAATACTTGTGTTACTTGATACAGATCATTAGACTTAAACTCCATATATAATTGGAATAGGGAA TTTATTGATGGTACTTTCATGATTCAAGGACCCTGGTTCACAAACATCAATGTGCAACACATTACAAGTAAGAGTTTTAGTAACTATGGTAAAGGGTCTG TTCCATGAAATGTTTGAAATTCTAGGAGATGGCATTTTCAATTCTGATTTCACAAAATGGAAGTTCCACAGGGACATCCTTCATTCATTGTTTAAAAACA ACAACTTTGAGAGATTCTATCAACAAATCATTCAGAAGAAGTTGGAGATTAGCATCCAAACGTGAAGACCAAACCAAAAACAATAGTAACCAAGCTGATG AGTCAGCAAATCAGAGATACTTTTGTAACCAAACAAGAAAGAGTAAACTGTATCATGGAAACCATGATAAATGGATCTTAAAAATTTATAACTTTCACCT ATAGATTACTAACTTTTAACCATGGCGACACGATCCTCCATTGTTGTTGTGTGATGTTCTTCGTTTGTAGAGCAACTCTTCTATCCATTTCCCCTTCCTT TTCTATGCTCTTCCTTTATTGATGGTAGATAGAGCAACCTTTCTGGGCAGAGATAGAGACTATATTTTTCAAGTCTTTTTCTGATGAGTATAGTGCTTCC ATCAAGCACTATATATAGACTAATGGTCTTATCATTTCATTCATAACTCTTCATTCAAGAGTTATTGTCACAAGAGGCAATCTTACGGAAAGTTGGCTTA ACTTGGGAGCAGATGAGCTTAAAAAGTTGGTTTACTTGCATGATGCTATATATGAAACCTTGAGGCTTTTCCCTCCTCTGCCAATAGACCACAAGTGTGC CATCAAATCTGATATACTTCCAAGTGGTTACATTATTTACCCAAACACAATGTTATTGTACTCTCTATATGCTATGGGAAGGAATGAAGAAACATGAGGA AAATATTGCTTGGAATTTAAACCTGAAAGATGGGTTTCAGAGAAAGGAAGCAATGTATACATACCATCTTACAAGTTCATAGCTTTTAATGCAGGGCCAT GAAGTTGTTTGGGTAGAAACATCAGCTTCATCCAAATGAAACATGGCTTCAAGGTCAAGATTACAAAGATATGTGTATCTGAGTGAAACAGTGTGTTCTG AATTATTTATTGGTTGTGTGTTCTCATTTTTTTTATATCTGATTACTACTTCAATATGTCTGTGCGTTATTTTTATTCATGGGTCGATCCAATTAGAAGC GTGACCATTGATAAAAACAAAGTAAATAAGGTCTTAGTAGTAGCATAATGTTGGCTCAAGTTAAATTTATTTATTTGAGAAGCTGAATTTTTAATACAAG ATTAATTTGTTCCCTTCTTTACTCAAGATTAAAGGAACGTTTGTTTAAGTGGTACATGTTTGATTCCCATTAAGCAAGAACTTGAGTTCGATCCTCGTAT A BLAST |
| Tissue | flowers |
| Gene name | LI_gene_82702; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_146537
| Blastp | ADP-ribosylation factor GTPase-activating protein AGD4 from Arabidopsis with 60.07% of identity |
|---|---|
| Blastx | ADP-ribosylation factor GTPase-activating protein AGD4 from Arabidopsis with 57.79% of identity |
| Eggnog | domain, ankyrin repeat and PH domain(COG5347) |
| Kegg | Link to kegg annotations (AT1G10870) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413717.1) |
| Pfam | BAR domain of APPL family (PF16746.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |