Ll_transcript_146562

• Id Trinity: FTRINITY_DN59086_c4_g1_i25
• Name Transcript: Ll_transcript_146562
• Sequence: CAGGAAAGGAGATAGTACCAAGACAGTTTGAGGAGCATCTGCTATTCGGCTAACATGCTTTGGACAACATACAAAAGTGTTGGGCATGACCGTATGAGAT ATATTTAAAGTCAAAAGAGTAGAATGGTGAGTTTGATCGAAGCAACTACAGAGTCAGCGAAGCAGAGCAACAACACAAGAACACAAGAACACAACAATGG CATCTTCCTTCATCAAACTCGACGACTCCCCAATGTTCCAGAAGCAGTTATTTTCGCTCGAAGAAGCAGCTGATGAGTTAAAGGACCGGTGCCAGCAACT ATTCAAAGGGTGCAAGAAGTTTATGGAAGCTTTGGGGGAAGCATATAATGGAGAAGTTTCATTTGCTGACTCGTTAGAAGTATTTGGCAGTGGCCAAGAC GACCCTGTTAGTTTATCAGTTGGAGGACCAGTGATATCTAAGTTTATTACCACACTGCGTGAGCTAGCTAGTTTTAAAGAGCTTCTTCGTTCACAGGTAG AGCACATGTTGATTGACCGGCTGACAGAGTTTATGACTGTTGATTTGCAAGATGTGAAGGATTCTCGTCGACGTTTTGACAAAGCTGTGCATTCTTATGA TCAGTCACGAGAAAAGTTTGCGTCTTTGAAGAAAACTACACCAGGAGACGTTGTCATTGAATTAGAAGAGGTTTGCTTAATCAATTTGTCAATGATTAGT AGTTTCTTGAATTTGATGCAAAGTTTACATTGATGAGATCAACATTCTTTTTTAATGTGAAAGTTTTAATCTGAAAGGAGCTCCAAAGCCCATGATGAGT TTTGAAGTGTATGGCACATATATCATTCCCACATTGATTCTGAATCCAAATTTGTGACAATCACTATCCTAAAGGGATAAAATGCATCGTGTAATATTGA AAACGGAAAATGTAACTTTGTGGACAGTGTTATGGGCCCATTACGCATACCTGTATTTCCAGCAAGAGATGTCTTATCTTTTTGAGCCTCTATGCAATGT ATTTTATTACCTTGTTGATCTCCATTCATGGATGGCTCTACATATTTGTTCACAGGGCCATTTAATTCATCTTGTTCTCTTCTATTATTACTGTTAAAAA ACATTATTTTATGACTATTTGTGAATCAAAATTATTTAATCAATTATCTCACTATTATGATCCCTGACAGGATCTACAAAATTCAAAGTCAGCATTTGAA AAAAGTCGCTTCAATCTAGTGAACTCGCTCATGAATATTGAAGTGAAAAAGAAGTATGAGTTCTTGGAGTCCGTTAGTGCAATAATGGATGCTCATCTGA GATACTTTAAGTTGGGTTATGAGTTACTGAGCCAAATGGAGCCTTATATTCACCAGGTGCTAACATATGCTCAACAATCTAAAGAAATGGCTAATATCGA GCAAGATAAGCTTGCAAAACGAATCCAGGAATACCGAACCCAGGCCGAGCTGGAAAATACACGAGCTTCTTGCAATACAGAACCCTTGCCAAATGCTGAT GGCACCCATGTTGTAGGCTTGAACTCTTATAGAAGTTTTGAATCAGGGATGCAGCCTGAAACCAAGGGCGAGGTTCAAACAGTTAAACAGGGCTATCTGT TGAAACGATCATCAAGCTCGCGTGGAGATTGGAAACGGAGGTTCTTTGTACTTGATAACCGAGGGAGTTTGTATTATTACAGAGTGAAAGGAGGCAAACC CATGGGCTCTCAGTCATATCATTATACTCGTTCTGGTGAACAAAACAGTGGCATGTTTGGTAGATTTCGTTCAAGGCACAACAGGGCAGCATCGCTAAAT GAGGATATTTTGGGTTGCTGTACAGTTGATCTGTGCACATCCACTATAAAGATGGATGCAGAGAATACAGATCTACGACTTTGCTTCCGTATTATTTCTC CCTCGAAGTCATATACACTGCAGGCTGAAAATGAAGCTGATAGGATGGACTGGGTAAACAAAATAACTGGAGCCATCACATCGCTTTTTAATTCTCAGTT TCTTCAGCCTCATTATGGTAGATTACATTTTGAAAATAAAAACTCAGCAGGTAGTGCTTCCTTGACTAGCCAATCAGAGGATAGTAATAGATCTTTGATG GATGACATATATTCCAAGGAAGTGGTTAGTGTCTCTAAGATTTTAAGGGGAATTCCTGGGAATGATAAATGTGCTGAATGCGGTGCTACTGAACCAGAAT G
• Tissue: flowers
• Gene name: LI_gene_82702;
• Additional information: details;

Expression of Ll_transcript_146562

FPKM

• FPAB: 0.4
• FPNAB: 0
• LF1: 0
• LF2: 0
• LF3: 0
• LF4: 0
• UF1: 0
• UF2: 0
• UF3: 0.4
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_146562

• Blastp: ADP-ribosylation factor GTPase-activating protein AGD4 from Arabidopsis with 58.54% of identity
• Blastx: ADP-ribosylation factor GTPase-activating protein AGD4 from Arabidopsis with 60.17% of identity
• Eggnog: domain, ankyrin repeat and PH domain(COG5347)
• Kegg: Link to kegg annotations (AT1G10870)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413717.1)
• Pfam: BAR domain of APPL family (PF16746.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;