| Id Trinity | FTRINITY_DN59086_c4_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_146538 |
| Sequence | AGAAAGTAGTGAGTTTAACCGAACACAAAGCACAGAGCAACAACAACAATGGCATCGTCATTCGTCAAACTCGATGATTCTCCAATGTTCCAGAAGCAGT TATTTTCTCTTGAAGAAACGACTGACGAGTTAAAGGACCGGTGCCAGAAACTATTTAAAGGGTGTAAGAAGTTTATGACAGCTTTGGGGGAACAATATAA TGGGGAAATTTCCTTTGCTGATTCATTAGAAGCATTTGGCGGTGGCCAGGATGACCCTGTTAGTGTATCAATTGGAGGGCCGGTCATATCTAAGTTTATT ACCACACTGCGTGAGCTAGCTAGTTTTAAAGAGCTTCTCCGTTCACAGGTAGAGCACGTGTTGATTGACCGGCTGGCGGAGTTTATGACTGTTGATTTGC AAGATGCAAAGGACTCTCGCCGCCGTTTTGACAAAGCTGTGAATTCTTATGATCAGTCACGAGAGAAGTTTGTGTCCTTGAAGAAAAATACCCCGGGAGA CATTGTCGCTGAATTAGAAGAGGTTTGCTTCATCAATTTGTCAATGATTAGTAATTTCTAAAAATTGACGCATAATTTAATTGATATCTACTCTAGAATT TGTTTCATATTTTATTGCTTTAATAAAAAATCTATTAGTGTCTTTTTATTGGTGCATTAAATTAATTAATATTGTCAATGAATGTTGAAGTAAGTAGTAG CTCATTTCTGGCTGAAGCTTTAGTTCTGTATTTAGGTATGAAAGGTTGATTAAGTTTCACAATTTTTATTCTCTTCATTCTTTGTCCACTTTTTCTTTTT TGTTTGACTCCGCCTTGGATAATTCATTTTGCCTTCTTGATGATTGATTTGAGTTTGAAGTGTATCACTCATATATCCAAATCTTTGACCAATCAGTATC GTAAAAGGATAAAACGTGCTGTGTAATATCTTAGCTATATGTAAATTTAGTGGGCAGTATTATGGACCCATTATGTAGACATGTATTTCCAGCAAGAGCT GTCTTATTGTTTAGAGCCTCCATGCAATAGAGGGTCTACTGTCATGGAGCAAGGCCTTTTAATCTATTTTATTACCTTGTTGATCTTGATTCATGGATGA CTTAAATATTTGTTCACATTGCCATCTAATTCATCATGTTCTCATCTATTATTTATTGTTAAATAGCATATTCTTTCACAGATATTTGTGATTCAAACTT ATTTAATCAATCATCTCACTATTCTGATCCCGGACAGGATCTACAAAATTCAAAGTCAGCATTTGAAAAAAGTCGTCTCAATCTAGTGAACTCTGTCATG AACATTGAAGTTAAAAAGAAGTATGAGTTCTTAGAGTCCTTTAGTGCAATAATGGACGCTCATCTGAGATATTTTAAGTTGGGTTATGACTTAATGAGGC AAATGGAGCCCTATATTCATGAGGTGCTAACATATGCTCATCAATCTAAAGAAATGGCTAATATTGAGCAAGATAAGCTTGAAAAACGAATCCTGGAATA CCGAACTCAGGCCGAGCTGGAAAATATACGAGCTTCTTGCAATACAGAACCCTTGCCAGGTGCTGATGGCACCCATGTTGTAGGCTTGAACTCGTACAGA TGTTTTGAAGCAGGGTTGCAGTCTGCAACCAAAGGGGAGGTTCAAACAGTTAAACAAGGCTATTTGTTGAAACGATCATCAAGCTCGCGCGGAGGTTGGA ATCGGAGGTTCTTTGTACTTGATAATCGAGGGAGTTTATATTATTACAGAGTGAAGGGATGCAGCATGGGCTCTGGTGAGCAAAACATTGGCATGTTTGG TAGATTTCGTTCAAGGAACAACAGGGTAGCATCGCTAAATGAGGATATTTTGGATTGCTGTGGAGTTGATCTCTGCACATCCACTATAAAGATGGATGAA GAGGATGCTGATCTACGACTTTGCTTCCGTATAATTTCTCCCTCAAAATCATATACACTGCAGGCCGAAAATGAAGCTGATAGGATGGACTGGGTAAACA AAATAACTCGAGCCATCACATTGCTTTTCAATTCTCAGTTTATTCAGCCTCATTATGGTAGATTACATTTTGAAAATAAAAGCTCAGAAGGTGGTGCTTC CTTAGCTAGCCAAACAGAGGATAGTAATATATCTCTGATGGAAGTGGTTAGTGTCTCCAAGATTTTAAGGGGAATTCCTGGGAATGGTATATGTGCTGAA TGCAGTGCTCCTGAACCAGAATGGGCATCTCTAAATCATGGCATATTACTGTGTATTGAATGCTCTGGGGTGCATCGAAATATTGGAGTTCATGTCTCCA AGGTGCATGCTTTCATATATATAAATACAAACCATTTATTTTACTTGAGTTTACAATGTGGAAATAAGAAACTTTTTGTAATTTGAGTGAAATTTATTTT GAATCCATCCTTAACATTGAAGTATCCAAAATTTGAGAATGTAAAGACTTGATTCTATTCCTTTGAAGTGCTTACAGATCTTTGCAGACTCTTTCTTTCT TGTGCAAAGGGCTTTCACTTTAAGTTCAAGAGTCTTATTAGTTTTAGAAAATATAATGAGTTGTTGTTTATCTTTATAATTAACCGAGTCAATCTGCATA AATAATGTGTTTTTTATTTGGTATTAACTAACTATATCACTTTCTAGATGTAAACATCTGATCTGCTAACTGCAGGTGAGATCATTAACATTAGACGTTA GAGTTTGGGAACCTACTGTTTTGGAGTTATTTGATAACTTGGGTAATGCTTATTGTAATTCTATCTGGGAGGGCTTGCTTGTAGTTGATGATGAAAGAGT AGCTGAGTCAAATGCGCCTATGAAACCATGCCCCACAGATGCCTTCCAATACAAGGAAAAGTACATTCAAGCAAAGTATGTAGAGAAATCACTAATCATC AGGGAAGAGGATACACCCGGGAATCCTTCACTTCCCACAAGAATCTGGCAAGCAGTTCAAGCTATAAATGTACGAGAAGTGTATCGCCTTATTGTTACAT CAAATTCAAATCTGATAAACACGATATATGATGACGTGGTTAAAGATTTGAACTTAGGACCTATGAACGAAGGGCATCAGCATGATCCTGAAGCCTGTCT GAGAATTGAAGAGACTAATGAGACTAATAGGTGTTTCCGTGGATGGTCATTATTACATCTGGCATGTCATTCTGACAGTGCACTAATGATCGAGTTGTTG CTCCAATTTGGTGCTGATGTAAACATGTGTGACTATCATGGAAGGACCCCATTGCACCATTGCATTTCCAGTGGGAAGAATCCATTGGCAAAGTTTCTAT TGAGAAGGTAATACTTTTATTTTAATTTAGTCTTTTACCCAGTCTTCCATGTTTTGTATAGTAAGCAAATGAAAACTCTATTGAAGTTGTGTTAGAAAGA ATTTAGTGAACATCTGAAAAGAATTTAAGACAACCTTAGTTATACATCAAACTGTAAGATCCTTGCTTATTAAAGGAAGGAAGCCCTTGATATCCCTGAA TGGAACTCCAGAAAGCAGCCAGAAATAGAATTTCGTCTCATCAAAGAAGAGGCAGTAATCGTCCTTGAAGGATTTAGGAAACTAAATGCCATTAAATGAC AGCACAGAACTCAAGCACCCTATCTATCTTACACGAGTTTTACCTCCTTATTTTTTTCCAACAGAAGTGGGATTCTTATGCCATGGTAAGACTTTTACAA AGAGTTGGATATCATGATATCTGAGCATGTCACACACACGCACACAAAAAATAATCAATACAGAAATGCTCTTATGTCCGTGTACGTGTCAATTAGGGAG ACTTGTTACAGATATTATGCGCTGATTCTGAGTACCAGAGCAGCTCATAAAGACAGGAGTTCTGCACTATGCTCTAGTCAAACATAGAAATATGCAGAGT TGCATACATCACACATCAGTATAAAATTTGCACCATATGTGGTACACAGTACACTTGTGTCTGCCTAAAGTTTTGGCTATGAGCTTTTATATTTTCCTCA GTTTATTTAGTACCGCAAGCAACAAGGAATATTTCCTATACTTTCTTGAGATCTTATTATTCATCAATATCCCCAATAATACCACCCCTGCCCTTTAAGG AGCCTCACTGACTGGATTAGTCCATCAGTTTCTTTTTCATGTTTTATTTTGCATCAATACATGTTATACATTTGTGCATGTTAGGGAGACATGTATGGTT TTTTTGAACATCAATCTCTGTATCTCTCACACACTCTTCCGATAAAAGCATAAACTAACATGCCAATTTGTCAGGGGCGCTAAGCCGTCAGTTAAAGATG CTGGTGGACTCACTGTACTTGAAAGAGCAATGGAGATGGGAGCAATATCTGACGAAGAGCTATTTATCAAGCTTGCTGAATGCCAGTAAAATTGAACTGG CATAAGTATTGTGTTGACAATGTTTACGAGTTTTATATAGGATAGAAAGTTCACTGATTTTAGCATGCATGCCTATTTCACTAAAAGGAAGTTTAACTAT TATTTTGGTCTGGATCCATAATTTATCGTCTGTTGTTTATAGAGAATGCTTCTATAGTAAATTACATTACTATATAGTAAAAAAAAAGATCTTGAGTGGT TTGAGAATTCTGTTGTGTTTATTCAATTCTGTTTACTAACAAGGTGTTGGTCTAGTGGTGCAAAGTTCCACTAGATCTCTAAGGTCGAGGATTCAATTCC AATGAGTGATACTTGTTGGGAGGCAGTCACGAACCTCGAATGAGAATGTCCTTACTAAAAAATGTGAGGAAATACCTTGATAGTATAAAAAAAAATGGCA GCCCTTATTACATGATGAATTTTCATTTTTAATCCCTCATTTTGAGTTCTGTATGAAATTATAATTTATTGAAAGTGATTCTATAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_82702; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_146538
| Blastp | ADP-ribosylation factor GTPase-activating protein AGD2 from Arabidopsis with 57.71% of identity |
|---|---|
| Blastx | ADP-ribosylation factor GTPase-activating protein AGD2 from Arabidopsis with 59.03% of identity |
| Eggnog | domain, ankyrin repeat and PH domain(COG5347) |
| Kegg | Link to kegg annotations (AT1G60860) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450952.1) |
| Pfam | BAR domain of APPL family (PF16746.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |