Id Trinity | FTRINITY_DN59099_c1_g5_i3 |
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Name Transcript | Ll_transcript_146235 |
Sequence | TCTAGAACTTAGCTTGGTTACCACAAAGGGTGTGGTTCACATTGATGTGATCATGTTAGCTCATAACCCCGGTGGGAAAGAGAGAACAAAGAAATATTGA TAAGAATTTTAATCTATTCGCTACAATGACCGTTGTGGAGCTAAGGATTTTCAAGGAGTTGAAGCAAAGTGTTGCTAATGATTGGAGTGGGACTAAGCCG TTGGTTATGGAGGAAGATAAGGAGTTTATGGAGAGGAAGGAGAAATTGCTGGAGTTTGAGCAACGACTTAGCACTGTTTCTCAGCAGGCTTCTGCAGATT TTGGCTTTTGTGCTTCTGGAAATAACAAGAAGCTTAATATCTATCATTTGAAGAGTGATGATGAGTCTAAGGAATTGGAACACACTGGTCATGGGAGTGG ACTTGAAAACGTGAAGGGAATGGGTGCGGAACAATTGCTACAATACGGTGTTGTGGCTCAGTGTCTCATCCATTCCAGATCTGTCACGTGGTGCACTGTT CCCTTGGCTGCCGGCACGTGAATCCCATTTCATAGTGCGTAGACTTATATTTCTATACAGGTATATTTCATGGTTTATCAACTATATATTTAAGCGTATT GTTAATTGGTTTTAACTAATAAATAAACAATTTAGTAGCTACTATTTGGCAGTATTGAATAGTAATTAGTAAGAAAGTCACATAATGCTATTTAGGTGAA TAACTTTTAGGATTATTTTGATAATATTAAAAACTATTTTTATTAACTAACATCTAAACTTTTTTATATAAAACAGAACTGGTC BLAST |
Tissue | flowers |
Gene name | LI_gene_82792; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_146235
Blastp | Sorting nexin 2B from Arabidopsis with 61.54% of identity |
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Blastx | Sorting nexin 2B from Arabidopsis with 64% of identity |
Eggnog | sorting nexin(COG5391) |
Kegg | Link to kegg annotations (AT5G07120) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456646.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |