| Id Trinity | FTRINITY_DN59099_c1_g5_i6 |
|---|---|
| Name Transcript | Ll_transcript_146242 |
| Sequence | CTCAAGATGTTACTACAACATCAATTGATAATGTCTCCATCTCTTGAGCATTTGTAAGTTTTCCCTTTACGTCTACCTCTGGTTTTGAATATATTACAAC AAAAGATTCTTGTGATTCTGCTTCTTCGTCAGTGATAACTAGATAACCAGAAAATGGTGCATCGGGTGGAGGATTCTTCATCTACAGTCACCTCATATCT CTTAAACCTTTTTATTTTTGTATAACCCATCTCTCCTATTTATTTAGGCAAATAACAACTGTTTACGGCCCTTGTGAAAACAATAGAGATTATCTTTTCC TGCTTGAAAAGACCTTGCATGACATTGGCTGAATCTCTTGTGAAGTCTCAGCAAGACATGGGTGAGCTTGGGCTGGCCTTTGTAAAACTGACTAAATTTG AGACAGAAGAAGCCTTATTTGAAGCTCAGAGAATCAGAGCAACTTACACAAGGAATGTGGCAACGGCAGCTGTTAAAGCAAGCAGGTTATATAGAGAGCT GAATACACAAACAATCAAACATTTGGATAAACTACATGACTACCTTGGGACAATGCTAGCCGTCAACAATGCATTTGCTGACCGATCAAGTGCATTATTG ACGGTTCAAACACTCTCATCAGAGCTAGTTTCTTTAAATTCACGGATTGAGAAACTTGAAGTTGCCTCATCCAAAGTATTTGGCGGGGACAAGTCTAGGA TGCGGAAAATTGAAGAGTTGAAAGAAGCCCATAGAGTTACCGAGAATGCTAAAACATGTGCAGACAGAGAGTATGAACGAATCAAGGAAAATAATAGGAG CGAACTTGAAAGAATCGACAAAGAGAGGCATGATGACTTCTTTAGCATGTTGCGAGGATTTGTTGTCAATCAAGCAGGCTATGCAGAGAAGATGGCAGCT GTGTGGGAGAAGCTTGCAGAAGAAACGACTACATACTCAATAGACAGTAGCTAAAGTTTATGTTATTGTAAATTTTTGTTTTTGCCCTCTTTATGCTACC TTCTAGATTTTTGTTTCTTGATTTATAAACACTTAATTTGCAAAGACAGTAGCTTATGTAGTTTAGAAATACTTTTACATTTAGCTAACTTAATTTTAAC TAAACATATTTGGATCTAAGCACTGGATCCCAGCACTGGATCCTGGGATCCCATTGCTGAGATGGGATTCACTATCCCATCCCAGATTGGAATCTCAGCT ATACTAGTTGCAAATCCCATGATTCTGTCCCAGTTTCCCAGCGAGATCTCACCGTGAAAGGGATGACGGGTTAAAACCCCATTTTGCCCACATTTTTAAG TCACCATGTCCTGATCTTTTGGTCATTTGGACAAGCTTGTTGCTTGTTATGTATTTAATTGTGTAATTTTCTATTTTTAGCATTTATGTGTAGGTTATAA ATTGCTCATTTTGCTTGCTTAGATATTCCTATGCCAGTCATCCCACTATTCACTCCCGTTTTTTTTTGGGATTGACTTCATAGAATTGGATACGCATATC CTTTATTTTGCTGTTTTGTTTTGGTCTTCCATTCGAGCTATACTTGAGTCATCTGTCTGTTTTGGTCTTCCATTCGAGCTTTATTTCGAGTCATTTGTCT ACTCTGGTTCCAAATTAGTTCTGAAAGTCTACAATGGCTCTCTCTTCGGCTTTCCTATAGATGTATTTGGTGATAATGTGAATTGTCAAGAGACTAAAAT TTATACTACGTAGACTTTTATGAAGGGGTATTTGTTGATCGTTTTATTTAGATGATTAACTTGACGGCCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_82792; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_146242
| Blastp | Sorting nexin 2A from Arabidopsis with 71.98% of identity |
|---|---|
| Blastx | Sorting nexin 2A from Arabidopsis with 71.98% of identity |
| Eggnog | sorting nexin(COG5391) |
| Kegg | Link to kegg annotations (AT5G58440) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456646.1) |
| Pfam | Vps5 C terminal like (PF09325.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |