| Id Trinity | FTRINITY_DN59099_c1_g7_i3 |
|---|---|
| Name Transcript | Ll_transcript_146236 |
| Sequence | CTGAACTATTCTTGAAACCATTTAAATCTGGCGTTGGAATTTATTTCAACAAAGCCGAGATGGCGAATAAAGAATAAAACCGAGTTCAAAAACTTAACTA AAACCAAAGTAAAGAGATTCAAAGCACTTGTAAAAATACTTTTCAAATAAAGTGCGTGTACAGAATAAAAACACACAACTAATCACGATCTCAACACTTT CAACACTTATCTTGGGGGAAGAGGAGGAATATGAAGGAGAGAATGAGGAGGAACCAAGACCAGAAGAGGCAGATGCTTTACAATTGTCTCTATATTCTAT GAAGGGATTGACTTCTAACAGATCATGGAAGCTAAGAGGTGTGTTGAATGACAAACCGATGGTGGTGTTGATAGATTGTGGAGCATCCCACAATTTCATT GCTAAAGATTTAGTGCAGAAGCTTCAACTGACAGTGGAGGGAACTAAATCCTATGTTTTTGAGGTGGGTGATGGACACCAAGTCAAATGCAGTGGGAAAT GTTCTAATCTGAGAATCCTCCTACAAGATTCAGAAGTCATTCAAGACTTTTATGTCTTTGGTCTAAGGGGAATGGACCTAGTGTTGGGTATTGGATGGTT GGCTGGGTTAGGTGAAGTCAGAGCTGACTTTGGTAGACTGGTTCTGAACATGAAGAAGGAGGACTCAATAATCACACCTAAAGGAGATCCATCATTGACT AGGACAAAATTATCTGTTGGGGCTCTCATGCAAGTGTTAAGGGAAGAAGGGGAGGGATTACTGATTCAATATGATAAACCTAATCCACAAGCTGCTGGAC TCTCCATCCCTATTGAAATACAAGACCTGCTTTCACAGTATGAAGGAGTTTTTCAGAACCCTCAAGGCTTACCACCACCTAGAAGTCATGATCATGCAAT CCATTTGAAAGAGGGAGCAAATATACCTAACATCAAACCCTACAGGTGTCCATATTATCAGAAAGCTGAGATTGAAAGGCTGGTTGCAGAAATGCTAGGG GCAGGGGTGATAAGGCATAACGTAAGTCCTTATTCTAGCCCTATAATATTGGTCAAGATGAAGGATGGTGGGTGGAGGTTCTGTGTAGACTACAGAATCC TTAACAAAATCACCATAACAAATAAATTTCCTATTCCCCTAGTGGATGAGTTGCTAGATGAAATTGGAACTGCTAAGGTCTTCTCCAAACTAGACCTAAA ATCAGGGTACCATCAAATAAGGATGAGGGATGAGGATGTTGAGAAGACAACTTTCAGAACTCATGAGGGTCACTATGAGTTCCTAGTGATGCTATTTGGG CTCACTAATGCTCCTTCAACATTTCAAGCATTGATGAATGAGATTCTTAGGCCCTACTTAAGGAGATTTGCACTAGTATTCTTTGATGATATACTAGTCT TCAGTCCTGATTTGGTCGCTCATGTCCAACACCTAGATTCAGTTCTGCAGCTACTTGAAAAACACTCACTGAAGGCCAACAAAAAGAAGTGCAGCTTTGG CCAATCCAGCATTGAATATCTTGATCATATAATCTCTGAGAAAGGTGTTTCTGTAGATCTGTCCAAGGTTGAAGATATGGAGAATTGGCCTCAACCAATT AACTTGAAGAGACTCAGAGGATTCCTAGGGTTGACTGGGTATTATAGGAAGTTTGTTAGAGACTATGGCAAGATTGCAAAGCCACTCACTAACTTGCTCA AGAAGGATTCTTTCATATGGTCAGAGGAGTCTACATTGGCTTTTGAGAAATTGAAGAGTGCAATGGTAGATCTGCCCTTATTAGCAGTCCCTGATTTCAC CAAGGATTTTATAGTTGAAACCGATGCATCAAGTAAGGGTTTAGGGGCAGTTTTGATGCAAGAAGGGAGGCCACTAGCATATTGGAGTCAAGGGTTATCT CCTAGAGCCCAACAGAGGTCAGTTTATGAAAGAGAACTCATGGCTCTAGTGCAAGCCATTCAAAGGTGGACGCATTACTTGATGGGAAGGCACTTCATCA TCAGAACAAACTAGAAAAGTCTCAGATTTTTGACTGATCAAAGATTGTTCTCTGATGAGCAGTTCAAATGGGCAGTAAAGCTTGTTGGGTTGGATTTTGA AATTCAATACAAATCAGGGAGGGAGAACACAGTGGCTGATGCTCTATCCAGAAAGATGACATATTCTGCCCTTTCTGTCCTATCTAGTGATGAAGTAGAT ACTTGGATGGAAGAACTACAACATAACCCAATATGGAGAACAATTATCCAGGATTTGGTGGTTTCTCCCCATGCCCACCCTAACAATGAGTTGAGGAAGG GTCTACTATACTACAAGGGAAGACTAGTGCTAGCTAAAGACTCTAACAGAATATACCAATTCTCATAACATAATGCCATGAGACTGCCATGGGAGGACAT TCAGGTCACTTCAGGACTTACAAGAAGATCTCTAGTTTTCTATACTGGGAAGGAATGAAGGTAGATATCAAGGGGTATGTGGAAGCTTGTGAAGTTTGCC AAAGAAGCAAGTATTCTACCTTGGCTCCAGCAGGGTTATTGCAACCTCTGCCCATACCACAACAGGTTTGGACGGATGTATCTATGGATTTCATTGGGGG GTTACCTAAGATAAGGGGTAAGGATACCATTTTGGTGGTGGTAGACAGATTGACTAAAAGTGTGCACTTATCTGCTTTGGGCCACCCCTACTCAGCTAAG GATGTGGCCTCTGTTTTCATCAAAAATGTGGTTAGACTCCATGGTTTCCCCTCTGTTTTCATTTCTGATAGAGATCCATTATTCCTTAGTCAGTTTTGGA AGGAGGTGTTTAAGATGGCTGGAACTCAGTTGAAATTCAGTACTTCATACCATCCACAAACTGATGGACAAACTGAAATGGCAAACAGGTGTTTAGAGAC CTATTTGAGATGCTTTGTGGGACCTAGGCCTAAACAGTGGCTGGATTGGCTTCTTTGGGCAGAGTTTTTGTTTAACACCAACTATAGTACCCTCATCAGG GATGACACCCTTCAGGGCATTGTATGGGAGAGAGGCCCCTACTCTTCTGAAAGCAGGGGCTATTCCCTTCTAGAGTGGAAGAGGTGAAAGCATTATATAC GCAGAGAGATGCAGTCTTGGAAGAGTTAAAGCACAATTTGCTAAAAGCTCAAAACTTAATGAAGCAGAATGCTAATAAACACAGAAGACAAGTGGAATTT TCAGAAGGGGATTGGGTTTATTTGAAGTTGCAGCCATATAAGCTCAGAACCATTGCTAACAGACCCTTTGCCAAGTTAGCTCCTAAAAACTATGGACCTT ATCAAGTGGTGGAAAGGGTGGGAACAGTGGCATACAGGTTAGCTTTACCTTCTCAAGCAAAGGTCCACCCAGTATTTCCATGTTTCCCTTCTTAAAAAAG CCCTCAAACCTCATCAAGTGTCTCAACCACTACCTCCAATGCTTAATGAAGAGTTGGAATTAGAAGTCATTGCAGAAGATATCATGGAGAGCAGAGAAGA TGGTCAAGGAAATTTAGAAGTGTTAGTCAAATGGAAGGATCTCCCTAACCATGATTCTAATTGGGAAACAACAGCAACACTAACTGACAAATTTCCTTCC TTTCCACTTGAGGACAAGTTGGTACTTGTAGAGGAGGGTATTGATAAGATAGGATATAAGAAACCTATCATTAAAAATGTGTATAAGAGAGGGAAAAGAG GTGTTTGGATAAAAGGGTAACAGAATCACTGTTGTGATTCTGTTATATCCCTGGAATTCTGTTAGCATTTAGTTGTTAGGCCTTTAAATAGACCTTTTGG GGGGGGGGGAATATTAGTTTGTTAGTTAATTCTTGGGTTAATACTGATTGTGGAGTAAGTGGCGAGGATCGTGGGATCCATTGTACTTTCTTCTTCATTG TAATTCTTTCCTCTATCTTAATAAAACAATTAGAACCCTAGCAGAATTATACCCATTCTGGTTTAGGGGCATTTCTTTTCTACTTTCTTGAGTTTTATCT TCTTACCATTGATACCAGTGTTATCAGAAATATTGATAAGAATTTCTATCTATTCGCTACAATGTCCGTCATGGAGTTATTCTTTTATCTTGCCCATTAC ACTTCTTTTATCCCGCATTTGAGAGAATCGACTAAAATTAGCCATGGGTATATGCATTTGCCATAGATTTTCTTGTTCATTGCATGATTTTATTGTTATC AATACTGAGGCTATATTAACTCTCATTCAAGGCTATATTAACCATGGTATATATGTTCATATATTAACTCTCATTTAAGACTTTCATCTTAATTATTTCA ACTAAGGATTTTCAAGGAGTTGAAGCAAAGTGTTGCTAATGATTGGAGTGGGACTATGCCGTTGGTTATGGAGGAAGATAAGGAGTTTATGGAGAGGAAG GAGAAATTGGTGGAGTTTGAGCAACAACTTAGCACTGTTTCTCAGCAGGCTGAATCTCTTGTGAAGTCTCAGCAAGACATGGGTGAGCTTGGGCTGGCCT TTGTAAAACTGACTAAATTTGAGACATAAGAAGCCATATTTGAAGCTCAGAGAATAAGAGCAACTGACACAAGGAATGTGGCAACGGCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_82794; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_146236
| Blastp | Retrovirus-related Pol polyprotein from transposon 17.6 from Sophophora with 43.95% of identity |
|---|---|
| Blastx | Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 35.63% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416449.1) |
| Pfam | Aspartyl protease (PF13650.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |