| Id Trinity | FTRINITY_DN59103_c2_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_256002 |
| Sequence | ACTGCTTTTGCATTGAATGCACCACACTGCTTTTGCATTGAATGCACCACACTGCTTTTGCATTGAATGCACCTCACCCACAGCTTTCCTTATTAATACT TATTAGTTATTTCGCCCTCTCTCTTTATCTCCCTCCCTCCCTCTCTCACCTCCAACCTTAATTTCCCCACTCTCTGAATCTTGTACTTCTCCCGTTTTCT CCACCTTTTCAATTCCTCTCTTTCCTTTCCAGGATCTGCATGTTCACTTTCTTTCCTTCCTCGTATTTTTGTTTTCTTGCTTTTTTAGTTATGCTCAACT AACAAATCTCGTTAATTAACTATTTTTCCAAACCAAGTACCGTGTAAGTTACCCTTTAATACTTAGGTAGGGTTTTTGTTCTGAGTGTTTCTACTTGTAT AAATAAATACCTTCAGTTTCTTGGAATTTCAGTTTTGTTGTTGTCATTAATTATTGAAGGTTTGTTTGACCCCCATTTTCATAGGTACACAAGGTCTAAT TACTGTTTTTGTTATTATTATTATTTATTTGGCTTTTCATAAATGCTTGATCTACTTCTACAATATTCTTTTTTGTTATTTCAGTGATTCATTGTTGACA ACTTCATAGTCTTGTTCGTCTTTTCTGCTTTGGCCTTTTCACTTTATCTCTTCCCCTCGTTCTTTTCCTGTAGTGGGAAACCATTTTTTTTTGTATTCTT GTAATGATTTTCGTGCCTTATACCCTTTTTCTCTCTTCAAGAGTGAGAATTGCCTATTTACCAAACTTTTGATCCACTCCTTGCTGAGGTAAATGAGGAA AAGTGGAAGGAAAATAAGAGTTTGTAAATATATGCTTTTGTTCATGTGTATCCCCATTCAGATTCTATCTCATTCAGGTCAGTGAGTTCAAGTTTGTTAG TTCTACCTTTTCATCTTCTCTGTCTCGCAATTAGATTCCCCTTTTCCATTTTATGATGGATTTGATGTTTCTTGCCAGAAATATCTGTGTTTCTTCTTGA ATCATGATCCTTTGTTCTCATTCTTCTTCTTATCCCCTTTTTGTAAAGAAAGAAGAAAGAAATTGGGGTTCTTTTAAATTTAAGAGACAAATTCTTCAAT GCTCTTACAAGGATCTTGAATTCAAAATATACATGGTGTGTTGCAGCGTGAGTATTTATTTGAACTATAAATCTATATAGAGATCCATGTTTACTGAAAA AGGAAAGGCATAAATTTTGGGTCTGAAGTTGTTTGAAACATTAATATCGGACAAGGTCAAAACATAAGTTTTGTTTTTTGTTCTTGTTTGGTTCGGTTTT TAATGCTTACCTTCCGGGGGTTAAATCATCATATTATTTATAATTCTTTGTGGTTAAAGATTGAACAAAATTTATGTTAGGATTTATTTTATTGTAATAG CTTGTTTTGGTAAAGTTTTTTTACTCTTTTTTTAACCTTTTATTTTTACATGTTGCCCCTGCTAGATTCTTCTGATTTCACATATTAACTATCAAACTCA CCTATCTTTATGTGTTCAGCTGGTCTTTGCATTTGACTAAGGAGGAAATACCCCATTTTTCTACTGTGAGGCTTTAAGGTTGCTTATAGTTTGACCTCAG AATATTTGGAGTCAGAATTGTTGCTCAGTTGACCAGACTTGCAGCCTCGGATGTGATATCTACAGTAAAATTTAAGGAACTTTACCATATATTTGCATCG GATATCTGCATTCTGGAGTTGAGGAAATGGGGTGTTGTGTCTCAACAAGCAGCAGGAGTACTTGTAGCAGCAGGAGCAATGGAGAAAAGGTCTCTCCATC TTGCTTAGAAGTTGGTTGCTGTGGGCAAAAGAGAGCAGCAAGGAGAGCCTTCTCTGATCATGTTATTTCTCTGCACCATTTACCATCCATACCCGGCAGA ATGTTCTCCAATGGAAAGAACCAGTCTTCCTGCATGTTTACACAGCAGGGCCGCAAGGGTATTAATCAGGATGCTATGGTTGTATGGGAAGATTTCATGT CTGAAGATATGATCTTTTGTGGTATCTTTGATGGCCACGGTCCACACGGTCATCTTGTTGCACACAAAGTGAGGGATGCCTTGCCATTAAAATTGCTATC GTTTTTGCATTCATCTGAGTTGAAATCAAATGGAATTGGATTAGGTAAAGCATGCTTCAAAGGGAACATAGAACCTGATACCAGAGGATCTGATAAGGAT TGCTCTGCGGAGGATAAACTGAATTCGACATGGAGAGAAGCTTTCATGAAGGCATACAAGGATATGGACAAAGAGCTCAGGTCTCATACTAATTTGGACT GCTTCTGTAGTGGGAGCACAGCTGTAACTTTAGTGAAGCAGGTAGTAGAAAGAGCAGCATCTACTCTCTTGTTTCTCATTCCTTTTCCCTTTTCTTAATT TCTTATCTTACCAGGGTTCAAATCTGTTCCTGGGCAATATTGGGGATTCACGAGCAATCATGGGATCCAAGGATAGCAATGACTCCATGTTGGCAATTCA GTTGACTATTGATTTGAAGCCTGATTTGCCGAGGGAAGCAGAAAGAATTAAACGGTGCAAGGGAAGGGTGTTTGCTTTGCAAGATGAGCCAGAAGTTCAC AGGGTATGGTTGCCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCGTTTGGAGACTTTTGCTTGAAGGAATATGGAGTGATTTCTATACCGGAAT TCTATCACCGTGTGCTTACAGATGGAGATCAGTTCATTGTCATTGCCTCAGATGGGGTAATAATTTTCAATCTCAACTATTTTATTTATTTATAATTTAC TTGCTTTTTGTATTCTTCCCAATCTTGGTCGAGGAAGAATTACAAGGTGTAAAAAGATTACGTTCTTGTTTTTTGGTAACATGAAAGTCATTTCATTATT TTTCCCCCGCCTGAAGTTAGTTTCTTATTAGACCATGTTATGCTATGAAAGAGTGGAATAAGAACATGCAATGAGCAGAGGCAAATTTTTAGAATGATGA CATTGCACGCATTAGTTATTTTCTGGCAGTAATGATACTGAGAAAGGGCTTCTGGAAACCAACCGTGGAGTTGAATAGAATTGTTAAATGCTTTTCACAA AACTCGGAACATGTCTTCTGTTTTTGTGATAGTTGAAAAACAGCTTAGCTAGCTAGCCCTTTGAAAGCCCGAAGGATAAGATTGGCTCTTTTCAGTATGA AGAAACAAATCAGTAGCAAAAGTTGTCTAATGCTAACTGATTGCTTCTCATTTTCTGTTTTCATTCTCGGTTTGCCTTGCTGGACATCGTTAGAACACCT TATCATTTATTACTTCAGCTTTTTCGTGCAAGTTTTCTACAAAAATTATACGAGCATGACATATGATGAGTTTGAATTTAGATTTTGTAAAATAGACTAG AAATTCCGGTTTACCTTTATGTTATTTTATCTTGATTCTACTATCTTGGTTTCTGCTTACCTTTGTTTCATGTTCTCAAACTTCAGTGAAGGAAAAGGTG AAAACAATGAAGAGTTACTTTCACAATTTCTACATTTGGCTTTTTTTAAAAGTGAAAACTGTATCACTTTTGTAATTATCAGTGAGAAGGCATATCATTT GAAAATGAAAACTCAACAAAACCAATACCTCTTTAATGTTCTGAAACTACCATCTTCTCGTAATGTGTAGCATAACCAATTCTCTTGATGAATAGTGCAG GTCTGGGATGTTTTAAGCAATGAAGAGGTAGTTGAGATAGTATCTTCAGCACCAACTCGGTCATCAGCTGCAAGGAGTGTGGTGGCATCCGCTGCTCGAG AATGGAAGCTTAAATATCCTACTTCAAAGATGGATGACTGTGCTGTTGTCTGCCTATTTTTGGATGGAAAAATGGACTCAGAATCTGAATGTGATGAGCA ATGTTTTTCTTCTGCAACCATCCAGAGCAACCACTCTGGTAATCCAGTTGAATCAGATGATGTTCAAAAGTCGGAGCCATCTTTGAAAAGGAACTATACT GTGAGATCCTCAGAAGAAACCTATGGAGGACTATCTGTTGATGCCGGAGATGGAATATCATCAGCTGAAGAGCAAAACTGGTCCGGTCTGGAGGGCGTAA CCCGAGTAAACTCCTTGGTCCAACTCCCTAGATTTTCTGATGAAAGACCAAATGCTTTATTATAATACCTGTTGTAACTTGTAACATAGTGAATTCAAGA AAGAAAATCTTTCTGTGGATTTGTTGCTTTTCATTCAGTCAATTCCTTGTACCAAACTAGGCTCAATTAAGTTATTGAATTCTATTGGTTTCAGCATAAT GCATGGTGTTAATATCATCAACTCTCAAGAGGTCCTTCTATTTGTGCTCTGAGATTGTTACATATCAAACAAGAAATGCTATCAACTTCTGTTGGTCTAA GTGGTAAGAGTTTAGTTTCTTTTCAGCAATGTCTACACAGTCATTCCTCTAAGCTCTTTTCAGCAATATCTCAACAAGAAATTATGTAAATAAAACAGGA AGTTATTATGTCCTTTTTGACAAAAATTGATTTATATCTCTAGGATAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_82832; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_256002
| Blastp | Probable protein phosphatase 2C 1 from Arabidopsis with 57.01% of identity |
|---|---|
| Blastx | Probable protein phosphatase 2C 1 from Arabidopsis with 58.88% of identity |
| Eggnog | Phosphatase(COG0631) |
| Kegg | Link to kegg annotations (AT1G03590) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448994.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |