| Id Trinity | FTRINITY_DN59104_c2_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_254624 |
| Sequence | TTGCTCGGACCTAACTACCACACACCCCACGTGATTCTCCCTCTCACTATATAAACTCCCTTCTCTCCACCTTCCTTCACTTCCCTCTCTCTCTCTAACA CGTAACCACCAACACCTAACTCTCTCTCTCTCTGTTTCTTCACGTCGTTCATAACTAATTACGCGCTCAAGGGAACCACTTATTTTGTACTAGATCTATC GGTTTCTTCTTCATGGCGACTGGACAACTGTTCTCCCGTACTACACAAGCTCTGTTTTACAATTACAAGCAACTTCCCATCCAGCGGATGCTTGATTTTG ACTTCCTTTGCGGTAGAGAAACACCATCAGTTGCTGGAATAATCAATCCTGGTTCTGAGGGATTTCAGAAGCTCTTTTTTGGTCAGGAGGAAATTGCCAT TCCAGTTCATGCTACCATTGAAGCTGCTTCTGCTGCACATCCTACTGCTGATGTCTTCATCAATTTTGCATCATTTAGGAGTGCTGCTGCATCTTCCCTG GCTGCTTTGAAGCAACCAACAATCAGAGTTGTTGCTATTATAGCTGAAGGAGTACCCGAGTCAGACACTAAAGAATTGATTGCATATGCCCGGTCAAACA ATAAGGTTGTTATTGGCCCAGCCACTGTTGGTGGAATTCAAGCTGGTGCTTTTAAGATTGGTGACACAGCTGGAACAATCGACAATATAATTCAATGCAA GCTCTACAGGCCTGGATCTGTTGGATTTGTTTCTAAATCTGTATGTTGTTAATTATGTTCATGTATATGTTGCTGTCATCTTTCTCGCATTGAGAATAGA ACCCTTTTTGTTTAGTACGTAACTACATACCACCATGAAATTTCTGTTAATGTTTATGTGCTTGTGTTAAGGAGGTGAGGAATGTGTTCAAAACGTTTGC AAATGTATACATTCTACTAAGGATAATTGGGTATTGAGCATTTGATTAATAAGAACGGATTTTTTTAATGGATAGTTGTTATACTGGAAAGGAGATTCGG GTCCATTTTTTTGCCCATAATCCTCATCCTGTATTACGAGGAACCTTGCAGACTATCCCCATGGGGGTTATGAAAGGAGCGCCCCAATTGGTAGGGAAAA AACCAGTAACTCCTTGAGAATCGTAGGAGAGATGACTATGAATTGTGTCCTTTTCTTGTATATACTAGTCCATTATGGCTTAGTTCATCTAAAATCTTGA AAAGTAGTATGGTCTACGGGAAATCTCCCGAATCCTTAATCTTCTTATAAGCTTATTGCATAGGTTCAATATATGAAGATATTGTTCACAGTAATTTGTC ATTTGAGCTTTATTTCTATTGGTATGATATAATGTATACATTGATTGTTCTAATAAGAGAAGACAACCTTTTGAGTTGCAGGGTGGGATGTCCAATGAAT TATACAACACCATTGCCCGTGTAACTGATGGGATTTATGAAGGCATTGCCATTGGAGGAGATGTTTTCCCAGGTTCCACACTTTCTGACCATGTCTTACG GTATAACAACATACCACAGGTGAATTTTTCATTTCATCTAAAATGTCTGCAACCCATAACTAGCTGACTATAATATGGAGCATATCAGTTTTTGGTCAAT GATCAGTCTGGATTTACATTAAACCTCAGGTCAAAATGATCGTTGTACTTGGGGAACTTGGTGGGCGTGATGAGTATTCATTAGTGGAAGCTCTAAAACA AGGGAAAGTGACAAAACCAGTTGTTGCCTGGGTTAGTGGAACATGTGCACGACTCTTCAAAGCTGAAGTACAATTTGGTCATGCTGGAGCTAAGAGTGGT GGTGAGCTGGAGTCTGCTCAAGCAAAGAACCAGGCACTAAAGGAAGCTGGGGCTGCTGTTCCCACTTCATACGAAGCTTTTGAAGTTTCAATTAAAGAAA CATTTGACAAATTGGTTGAAGAAGGGAATATCACATCAGTGAAGGAATTTATTCCTCCACCAATCCCAGAGGACCTTAGCACCGCAATTAAGAGTGGAAA AGTTCGTGCTCCAACTCATATTATATCCACCATTTCTGATGACAGAGGTGAGGAGCCATGTTATGCTGGTGTGCCCATGTCTTCCATTATTGAAAAAGGT TTTGGTGTGGGTGATGTTATCTCTCTTTTGTGGTTTAAACGCAGCCTACCTCGTTACTGTACTCAATTTATTGAGGTTAGCATTTCTGTCATCTCTCTTG CTTCAGTATGTGAAGCTGGCCTACGTTTAAACTGTTTCGATAGTTTCCTTCAAAAAATAGGGTGGTTGGAGAGTTCTTTTGTTGCCAGTTTTCCATTTAT ATATTTCTTTTCAAAGCAAACTGTTATTGTTATATTCTTGCTTATATCTTGCTGATACATTACATTGGTTAGATATGCATCATGCTATGTGCCGACCATG GTCCTTGTGTCTCCGGTGCACACAATACTATTGTCACAGCAAGGGCTGGAAAGGACTTAGTTTCCAGTCTCGTATCAGGTAAACATATGCCTTTAGTCTG TCTACTTCTGAATAGACTTAGTATTTGACAGCATAACCAAAACTTGTATGCTTATAATGCCATAAAGTGGTTAGCAATTAATGAGCTCCTGTAACAGGTT TGCTTACAATTGGCCCTCGATTTGGAGGTGCCATTGATGATGCTGCTCGCTACTTCAAGGATGCTCGTGACAGGGTATGGTTAATAGGCTTTTCCAGTGG AGCTGGTTGGAACTACAATTTTAGGGATTGAACTGTTAAAGTGGCCATTTTTTTATAGAAATTAAATTAAATAAGGGAAAATTTTAAAGTTTTGATCTCC ATCCCCATCACCATGCACTGCATCTTTTATCCTCCAACTACCTCACTTCAACTCCCCTACAACTCTTTAACATATGGTACTATACTTTGTCTTGTCACAG AGTCTTACACCTTATGAGTTTGTTGAAAGTATGAAGAAGAAGGGCATTCGTGTGCCAGGAATAGGACACAGGTAACTAACTGTTCATTTACTAAGTAATA ATTGTGCTGTTTCTGCAGCTTTTACTATTGCTACGAAAGTCTATGTTTTTGCCAATGAGAGTTGGTTCTGTTAGTAGGATAACGTTGTCAACCATAAGGT CTTGGGTTCATTCTTGTCAGTGATATTTTATTGTTGATCACTTGATCATCTATAAGTACTATAGGGCTTTCATTGAAGCTTGTACATTACACTTGCCTCG GAAAGAGGCAACCTCCCCTCCCTAGAAACTTTGTTAAAATAGTTCTAAATATTTGAAGCTTGGTTTTGCTTTGTGTAAAAGGATCAAGAATAGGGACAAC AAAGATAAGAGAGTTGAACTGCTTCAGAAGTTTGCAAGCACGCATTTTCCTTCAGTGAAGTACATGGAATATGCTGTTGAAGTTGAAACCTACACTTTGA CAAAGGCAAATAATCTAGTTCTTAATGTTGATGGTGCAATTGGGTCTCTATTCTTGGATCTTCTTGCTGGTAGTGGAATGTTCACCAAGCAAGAGATTGA TGAAATTGTGGAGATTGGCTATCTAAATGGGCTCTTTGTGCTGGCACGTTCCATTGGTTTGATTGGGTAAGTTTAATATTTTTTATACATCTTTAGCATG AAGAACACTTCTTTGAATGAAGATCTCCTATCCCTGTCTCCCGCACCAATTAAAATGTGTCATTCAATTAAAAAAAAAATCATAAAAACAAAAACATATT ATTTTGTGTAACTTTGTTGGATATAGAGAGTTTTGGGGACATGGCATCTCTCTTTCACTTTTTTTACATTATTGTACTTTTGGACCTTAGTGGCCCCTTC TTATCCACAATTCTTTTGTGGTTCAAAGGGTTCCTAGTGGGTCTCACTTTTACTGATGGTGCTTGTTGGTTGGTGACCAAGTGTTCTCTTTTTTTGTGTT AATCAATTGAGCTCAGGAATCTGAATCCATCTCTAAAATGACAAATAAAAACACACCATATGGCTTAGTTTCATTCATTCATTCATTGTTCCTTATTTAA AATTTCAGGCACACCTTTGACCAAAAGAGATTGAAGCAACCACTCTATCGCCACCCATGGGAAGATGTTCTCTATACAAAGTGAGAGGGTCTTTTTTATG GCTTCAAGAACATCATCATCATGCTTCAAATTAGCAATCTTGAGTCTGAAATATGCAGAAATGTTTTTTTATAGCTGTTAGATTAGTGTTGTATGTTCTG GTGACAATCCATTTTTCCATTCTTAAGTTGTATTAAAATTCATGAAGAATTAACTCTGTCAATTTAAAATTTTACCTACTGATTCCTATCTCTGTTGTGT GGTGCCTTCAAAGGGAGAGGTCACTGAGAAAGTTGGTCCAGTTGAGGCTCACAGTTACTAATATCCAAAAAATATGATAACTTTGTGGTTAAGCAGATCA TTATATTATAATATTTATTATCAGTCTAAAAATTTATACTATACTATTACATCGGATGAATGATAATTAAATTATACAGTGTCAATATATACTTTTTTTT TCCTCTTACATTAAATCCCAATTCGAATATATAATGTCCTGACCAATTTTGCATGCATAGCCCTAGTATAAAGTTTCTGTTCCTTTAAATAGAAATCTAA TTTAGGAGTTACCTTCGATâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_82839; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_254624
| Blastp | ATP-citrate synthase beta chain protein 1 from Oryza sativa with 93.18% of identity |
|---|---|
| Blastx | ATP-citrate synthase beta chain protein 1 from Arabidopsis with 82.41% of identity |
| Eggnog | Succinyl-CoA ligase ADP-forming subunit alpha(COG0074) |
| Kegg | Link to kegg annotations (4325777) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440155.1) |
| Pfam | CoA binding domain (PF02629.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |