Id Trinity | FTRINITY_DN59107_c1_g4_i1 |
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Name Transcript | Ll_transcript_257140 |
Sequence | ATATGAACTCCATGGTTTATTGGCTGGAAATGTGAGTATTGTTACTGGTGAAAATATCAAGCCTTCTTATGGAGGTGACGATGAAGCATTTCTGCGCAAG GTTATAACACCCCTGTACCGAGTAATTGAAAAGGAAGCCAAGAAGAGCAGAAATGGAATGGCTCCTCACTCATCATGGTGCAACTATGATGATCTAAATG AGTATTTCTGGTCACCTGATTGCTTTTCTCTTGGATGGCCCATGCGCGATGATGGCGAATTTTTTAAATCAACAAGTGATATGACTCAGGGAAGAAAGGG TGCTCCAAGAAAATCAGGAAAAACTGGAAAATCAAATTTTGTTGAGACACGAACGTTCTGGCACATCTTCCGCAGTTTTGATCGTCTTTGGACCTTTTTT ATACTAGGTTTGCAGGTTCTATTAATTATAGCATGGGATGGGATTTCACTGATGGATATTTTTCAGACGGATGTCTTATATAACCTCTCAAGTATATTCA TCACAGCATCCATTCTGCGCTTACTTCAAAGTATCTTGGACCTGATCCTGAACTTTCCAGGCTATCGTCGATGGAGATTCACTGATGTGTTAAGAAATAT TCTTAAAGTCATTGTCAGTCTTTTATGGGTCGTCATTCTTCCACTGTTCTATGTGCATTCCTTCAAGGGTGCACCTAAGGAGATCAAACAGTTTTTTTCG TTTTTTAATGAAATAAAGGGCATCCCAGCATTGTATAGTTTGGCTGTTGCATTGTATATGCTTCCAAATATACTAGCTGCTCTTCTATTTCTTTTCCCAA TGCTCAGACGTTGGATTGAAAACTCAGACTGGCACATTGTTAGATTCTTCTTATGGTGGTCTCAGCCAAGAATCTATGTTGGACGAGGAATGCATGAGAG TCAATTTGCTCTATTAAAGTACACTCTTTTCTGGGTGTTGCTTTTGGCTTGCAAATTTTTGTTCAGCTATTTTTTCCAGATAAAACCTCTTGTTAAGCCA ACAAAGAACATAATGGACATTCGGCATATTGATTATAGTTGGCATGAGTTTTTCCCCAATGCTAAACATAACTATGGTGCAGTTGTTGCACTCTGGGCTC CTGTACTAATGGTTTATTTCATGGACTCTCAAATCTGGTATGCGATCTTCTCAACTTTGTGTGGTGGTGTTATTGGAGCCTTCGATCGTCTAGGAGAGAT ACGCACTCTGGGCATGCTAAGATCACGTTTTCAGTCGTTACCTTGTGCATTCAATACATACTTGGTTCCTTCTGATAAGAGGCAGAAAAGGGGCTTCTCT TTCTCAAAGCAATTCGCTGAGATTTCTGCCAACAGAAGGAATGAAGCTGCCAAATTCGCTCAATTATGGAATGAAATTATTTGCAGTTTTCGTGAGGAAG ATCTCATAAGTGATAGGGAGATGGATCTTTTGCTGGTTCCTTACTCATTGGATCCCAGCCTGAAAATAATTCAGTGGCCACCATTTCTTCTTGCAAGCAA GATTCCTGTTGCACTGGATATGGCAACTCAATTTCGAGGCAGGGACTCTGATCTTTGGAAGCGCATATGTGCAGATGAATATATGAAATGTGCTGTGATT GAATGCTATGAATCTTTTAAACATATCCTACACGATTTGGTGATTGGAGAAACTGAAAAAAGGATAATTTCCATCATCATTAAAGAAGTTGAGAGCAGCA TCTCAAAGAATACACTTATTACAAATTTCAGAATGGGCTTTTTACCCTCCTTGTGCAAGAAGTTTTTGGAGCTTGTGGAAATCTTGGTGAGTCATTCAGA ATAAAACTAAATATATCTATAGTTTGTATTCTTGAATTGTGTCTTGTCTCAAATCATTCTATTTGGAAAACATGTGTCTTCCATTTTTTTCACAGAAAGA TGCAGATCCGTCCATGCGAGGTACAGTAGTGGTCTTGCTGCAAGACATGTTAGAAGTGGTTACTGATATGCTGGTGACCGAAATCAGTGAATTGGCAGAA CTTAATCAGAGTAGTAAGGATACTGGACGACAAGTTTTTGCTGGTACTGAGGCAAAACCTTCCATAGCATTCCCTCCTGTGATTACAGCACAGTGGGAGG AACAGATAAGGCGTCTTTATCTACTCTTGACAGTGAAGGAATCTGCCAGTGAGATTCCAACGAATGGTGAAGTACGCAGAAGGATTGCATTCTTTACCAA TTCATTGTTCATGGATATGCCACGTGCTCCACGAGTTCGTAAAATGCTCTCATTCAGTGTCCTAACTCCATACTACAGCGAGGAGACTGTATACTCTAAG AATGACCTTGAGGTTGAGAACGAAGATGGTGTGTCAATCATATATTACCTTCAAAAGATCTATCCTGATGAGTGGAATAATTTCATGGAGCGACTTGATT GTAAGAAAGACAGTGAGATATGGGAGAAAGACAAGAATGTATTGCAGCTACGTCACTGGGCTTCATTAAGGGGGCAAACTCTTTGCAGGACAGTTCGAGG TATGATGTACTACCGTCGGGCTCTAATGCTCCAGGCGTTTCTTGAGATGGCCAGTGAACAAGAGATACTTGATGGCTACAAAGCTATTATAGTTCCATCT GAAGAAGATAAAAAAGATAAAAATAGTCAGAAATCCCTATATGCCAATTTAGAGGCTATGGCTGACATGAAATTCACATATGTTGCTACCTGTCAGAACT ATGGAAATCAGAAGCGTAGCGGAGATCGTCGTGCAACAGATATCCTGAATTTGATGGTTAACAATCCCTCACTCCGTGTTGCATATATTGATGAAGTTGA AGAAAGAGAAGCTGGAAAAATACAGAAAGTTTATTATTCTGTACTGATCAAAGCAATGGACAATCTTGACCAAGAAATATTTCGAATAAAACTTCCGGGT TCAGCAAAGTTAGGAGAGGGAAAGCCTGAAAACCAAAATCATGCCCTCATTTTTACTAGAGGGGAAGCTCTTCAGACTATTGACATGAACCAGGATAATT ACTTGGAAGAAGCATTAAAAATGCGCAACCTTCTGG BLAST |
Tissue | flowers |
Gene name | LI_gene_82865; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_257140
Blastp | Callose synthase 5 from Arabidopsis with 76.81% of identity |
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Blastx | Callose synthase 5 from Arabidopsis with 76.81% of identity |
Eggnog | synthase(ENOG410XQ8V) |
Kegg | Link to kegg annotations (AT2G13680) |
CantataDB | Link to cantataDB annotations (CNT0001755) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464130.1) |
Pfam | 1,3-beta-glucan synthase subunit FKS1, domain-1 (PF14288.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |