Id Trinity | FTRINITY_DN59126_c0_g3_i18 |
---|---|
Name Transcript | Ll_transcript_255389 |
Sequence | ATGATATGATTCCTTGGTATTGTAGAATATTTCCAAATATTTGTAAAACTAAATAGGAAGATTGTTTTGAGGAAGTATGTATTTGTTTTTAATGATATTG TAGTATAAAATAAGATTATTGACTTGCACAAGAGAAATTCACGGGAGGGTACTCATTACTCAAGATACTTAAAGGGATGAGTTGAAGGTAATTAAGAAGT GTTGTTTTGCCCTGAAGAGCCTAGAATATCTCGAGCACATCATCATATGTCAAGGCTCGAGATAAAAAAATGTCTCCAGGTATCCTGTCGGGTTTCCATC CCCCGTTGTCTCTCACAAAGATAAAAAAATTAGTGGCCTTTGGGAAGCTTCAAGCAAGTTGACACATGCTCAAAATTCAGTTTTGCCTATCATCTTCAAA CAAATTGATGGGCAAAATGAAGTCACAAATTGATGCCTAGAGGCAAACCGCTGGCGCATGATTGGCACCAATGCGAAACCATGGCCACAATGGTTGAGAT TTCCAAGTGTGGTGAGATTTCCAAGTGAGATTTGCTTTTTTTCAAAGTTGCATACAAATGCAAAGTTTTGTTTAGGTTTTATGGTCCATCCGGAGGAAGA ATTATGGAGATAACTTACAAGCTTTAACTACCTTTAGGAACTCATATCCACTTCGTTTTCCATGATCAATATTATTCAATGATCCCTATCGTTGGTCCAT TGTTTTTCAATGATCAATATTATTCCTTACTTTCTAATAGACTAAATATGAATGATGATGATCGAACTTATACCTTTTATCATAGAATTCAAGAGTTGGA GGTGAAAGAAGTTGATGGGTACTAGAAATATCAAAATAGTAGAACAAGAAAAATAGAAGTAGATAGGTTTATATATGCTGGAATTCTGTAACTCAGAATC AGCTTGAAGGAAAGAAAATTACAGAGATAATATATATATATACATATATATATATATATATATGTATTAATGGCAAACTGTGAGGTTGCCAAATCCTCCT AATTCCCAGTCCCACGAGTTCCTCCCTTATACCATGTCCCCATTCTCAGGGATATAATCCCCTTCATAACTGCTTAGTTTGTTATTTCCATAATGGGAAG TTATGCTATTCCCTACCATACCCCTCATTCCATAAACTCTAGTGAACTTGGGTCTCTCACAATACTTTTGTCTATTGGGCCTAATTAAGGGGTTTGCATC CTCAACAACATCTTTCTCCTCGAGGATGAAAGCTGGAAATTGCGTTTTCAGCATTTCCACTTGTTCCCAAGAATTTTCGAACTCAGGCAAGCCCTTCCAT TTGATTAAGACTTCACGCTCACCATGTAGACCTTGTCATTAACCTTGCACATGTTCAGGTTCTGGCCTCAACTCCCATTCATTCTTCATTCAAACAAGAT GGTAATGGTTGACTCTGGATGGTAGGCTTCAATAACTTTTTAAGGAAATGGGGAATATTAATGAACTCTGCTAGATTCTAGAAGCTGCAGTTTGTATGCC ACTAGGTTGATTTTTGCAATCATCTCATAATGACCATAATCCCTACTGAGTTTCTGATTCATTCTCTTGGCCAAGTTTTTGAGTTTGTATGGTTGGGTCT TCAGATAGACCATGTCTCCCACTTCAAATTCAAAGTCCAATGTCCCTCCTTTTCTTATTTGCTTGTTGCCTCATCAAATTATGAGCTTTAACCAGTTGAG TATTGAGTTCTTCTAGCCATAGATTTCTATCAGCTGTGAGGCCAGCCATCTCATCAAGTGTGATCATCCCCACGTCTCCCCTTATCACAATGGGGGGTTT CCTCCCATACAAGACTTCGAAAGGCGTAGGTCTCGTGGCACCTATTAACAACCTCAGTTTGACCATCCGTTTGGGATGGTAAGCTAGACTAAACTTCAGC TTTGTACCTACTAACTTGAACAATTCAGACCAAAAATTGCTCAAGAAAAATTTGTCTCTATCTGACACTATAGTGGAGGGAAATCCATGGAGCTTGACCA CCTCTTGGACATAGATTTCAGCCTCATCATTGGCTTTATAGGGATGTGCTAAGTCATCCTATCAACTATCAACTACAATCAGGATGGTGTCTTTCCCCAT TACCTTCGGAAGCCCCCTACAAAATCCATGGAGATATTGGACCAAACTAGGGCTTAGAACTTGGTACTTATTTCTCTGGTGTACTTCACATTGTTGGACA TATTGTTTTATGGAGGATTCCATTCCCTCCCAATTAAGGGTTGTCGAAATCCATTTCTAAATTCTGAAATACCCAGAATGACCTCCTACGGTTGAATCAT GAAACTCATGCAAAATTAAGGGAATCTTAGAGGAGTGGTTGGGATTACCATTATGTTTTTGTAGTATAGTCGGCCCTTGATGAGATGAAATCCAACATGT GTCTTTTGGTCCTTCATCAAGTCTTGCATGATTTTCTTTAATTTAGGATCCTGCAAAACTTCCCACATGATGCACTGGACTGAGGAAATTGCTGCAAATT GCATCTTCCTAAAGAGAGCATCAACAACTTTATTCTTGGTTCCTGGTTTGTATTTGATCTCAAAATCATATCCAAGTAACTTTGCCATCTATTTATGTTG ACCCTCATTGATAATGTTCTGTTCAATCAAATATCTAAGGCTTTTTTTATCAGAATGTACCTTAAAATGCCTCCCTAGAAGGTAGTGGTGCCATTTTTTT ACTGCAAAGACAATGACCATCAATTCCTTCTGATATAGAGATTTCCGCTATGCAATTTCTGATAGTGCTTCGCTCATGTATGCTAGGGGCTTTCCACCTT GCATGAGAACACCTCCTATGCCACTTCCTGATGTCTCAGTTTCGATCACAAACTCTTTTTCAAAATCCGGAATAGCCAAAATAGAAATCTTAGTCATGGC TTCCTTCAAATTGTCAAAAAATATGTGCCTAATAAAAATGACACTGAACTGATTTTCATACTTCATCTTTTTTGCATATGTTTTAGGTGGATGATTTTCA GTCCCTATTAGAGAATGACAGTGTGGAGGTCGAAGAGACAGTGAAGAGTTATACTGATGAACTATCTGGAAAGCTACTGTATATGGAGCAGCAACTGGAA TCACTTCTTGATGCTGTAGTGTCCAATTGTAGGCCCATGACCCTTGTTGAGAAGCAGCAGCTTCAGAGATTAATTCAGAAGCTACCAGCAGAAAATCTTG ACCGTGTCGTGCAGATAATTTGTCGAAGTAGGCCGGTGAAAGAACAAAAAACAGATAAAATATTTGTTGATCTGGAAAAAGAGGTATTATTACTGTAATT GGGGATATAGGATATATGATGTAGGTTGGTATTATTATATGGCCACTATAATTATGGGTATGATGTGTGAAGTTCTTTAAGATGATTATGTTGTTGATGT TCTGCAGGATAATGCTACACTCTGGAGACTGTATTACTATATTGAAGCTTTTGAGAAAGCCAAAATACTCTCTAGTTAGTGTTCAAGAAAGCCTAGTTTT TATGATTTTGAAATCAGCAATTCTAGTTCATTACAGCTATTTTGTAGAGAGCAGAAATATTTAGTTGGTTCTTTGTTCTCTTCTTTTGCTTGTATATTTT TAGAAATTAATCACCAAAAATATTTTTTGCTGATTCTTATGGAATATATCTATCTCCTTTTGATAGCAAAAATATTTTTTTCATTCTTATTTGGTTTTTA ATATAATGCTTAGTTTAAACATGTGTCTGTTGTGATGAACTTCATGAACCCTTGAAGTTCTTTTGATTACTGTTATTTTAGCCCCACATCATGAAAGTAA CCCCATTCTTTATGAACCTAGGATGTGGCTGTGGCTGTGGCCTCCATAGTGTTCTCCATCTTCCACACCTTATTCGCCATTAACTCCGAAAATAGCAGAA CATCATCGGTCATGTTCCCTGGAGCCGTCACCGGAATTTGTAAGATATGGCTTTCTATGGCCAACCCAGATATGCTTTATTTTCTGTTAAGATTTGTTGG TGTCTTGAATTTCTATCATTGCATACATGATTTATCTTGCAAGCACATGAAGAAAGTAATAACTCACTCAACACTACTTACTATAAACAGTCTCTTCATG CTTCTGGATTCAATGTTGGCATTGACACACTTTAATTCCCAAAATATTCAATTCTATAAGAAATTTGGCTACCAAAATAATAGAAGGAAATCTGCACATT AATTTCAACTTCAAGAGTGAAAAATTACATCAGCATATATTTACTAATATTCTTTCATATATCTGCTGGGAATGGGTTTGTCACATTACGTTGTTTGAAC ATTGATTATGTTAAGGTAGTTTTGAATTTGATTCACTGTTGATAGAATTAGCTCCACATACCTGTGGATATTCCCGATTTTGATATAATTACTAGTATGA GGATACATGTGAAAAACAAAAAAATAGCAACTACCAAAGAGTTTGAAGATTTCAAATCACTTTCTACGCTATTATTACTATCAATTATTAATTTCATGGT TATATGTATTGAATGATGTCATAAGGTTCTCTCTTAAATTATATTCAGAAGACATTTATCTCTATTTTTTAGTATTTTTGAAAGTGTAATTCTATCATTT TCACTAATACATTCATTTTTAATTTTACTTCATCTAGTTGTTTACTTAACCAACACAACATTCTCATATCTACTACATAGAGTCTATTATCTTGTTGACA TTTTATCATCCAACATTCAGTATTATATAACACTGCAAGTCTTATAGACGTATAGTAAAACTTCC BLAST |
Tissue | flowers |
Gene name | LI_gene_83044; |
Additional information | - |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_255389
Blastp | - |
---|---|
Blastx | Retrovirus-related Pol polyprotein from transposon 17.6 from Sophophora with 42.34% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_017438495.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |