Id Trinity | FTRINITY_DN59126_c0_g3_i19 |
---|---|
Name Transcript | Ll_transcript_255391 |
Sequence | ATGATATGATTCCTTGGTATTGTAGAATATTTCCAAATATTTGTAAAACTAAATAGGAAGATTGTTTTGAGGAAGTATGTATTTGTTTTTAATGATATTG TAGTATAAAATAAGATTATTGACTTGCACAAGAGAAATTCACGGGAGGGTACTCATTACTCAAGATACTTAAAGGGATGAGTTGAAGGTAATTAAGAAGT GTTGTTTTGCCCTGAAGAGCCTAGAATATCTCGAGCACATCATCATATGTCAAGGCTCGAGATAAAAAAATGTCTCCAGGTATCCTGTCGGGTTTCCATC CCCCGTTGTCTCTCACAAAGATAAAAAAATTAGTGGCCTTTGGGAAGCTTCAAGCAAGTTGACACATGCTCAAAATGAAGTCACAAATTGATGCCTAGAG GCAAACCGCTGGCGCATGATTGGCACCAATGCGAAACCATGGCCACAATGGTTGAGATTTCCAAGTGTGGTGAGATTTCCAAGTGAGATTTGCTTTTTTT CAAAGTTGCATACAAATGCAAAGTTTTGTTTAGGTTTTATGGTCCATCCGGAGGAAGAATTATGGAGATAACTTACAAGCTTTAACTACCTTTAGGAACT CATATCCACTTCGTTTTCCATGATCAATATTATTCAATGATCCCTATCGTTGGTCCATTGTTTTTCAATGATCAATATTATTCCTTACTTTCTAATAGAC TAAATATGAATGATGATGATCGAACTTATACCTTTTATCATAGAATTCAAGAGTTGGAGGTGAAAGAAGTTGATGGGTACTAGAAATATCAAAATAGTAG AACAAGAAAAATAGAAGTAGATAGGTTTATATATGCTGGAATTCTGTAACTCAGAATCAGCTTGAAGGAAAGAAAATTACAGAGATAATATATATATATA CATATATATATATATATATATGTATTAATGGCAAACTGTGAGGTTGCCAAATCCTCCTAATTCCCAGTCCCACGAGTTCCTCCCTTATACCATGTCCCCA TTCTCAGGGATATAATCCCCTTCATAACTGCTTAGTTTGTTATTTCCATAATGGGAAGTTATGCTATTCCCTACCATACCCCTCATTCCATAAACTCTAG TGAACTTGGGTCTCTCACAATACTTTTGTCTATTGGGCCTAATTAAGGGGTTTGCATCCTCAACAACATCTTTCTCCTCGAGGATGAAAGCTGGAAATTG CGTTTTCAGCATTTCCACTTGTTCCCAAGAATTTTCGAACTCAGGCAAGCCCTTCCATTTGATTAAGACTTCACGCTCACCATGTAGACCTTGTCATTAA CCTTGCACATGTTCAGGTTCTGGCCTCAACTCCCATTCATTCTTCATTCAAACAAGATGGTAATGGTTGACTCTGGATGGTAGGCTTCAATAACTTTTTA AGGAAATGGGGAATATTAATGAACTCTGCTAGATTCTAGAAGCTGCAGTTTGTATGCCACTAGGTTGATTTTTGCAATCATCTCATAATGACCATAATCC CTACTGAGTTTCTGATTCATTCTCTTGGCCAAGTTTTTGAGTTTGTATGGTTGGGTCTTCAGATAGACCATGTCTCCCACTTCAAATTCAAAGTCCAATG TCCCTCCTTTTCTTATTTGCTTGTTGCCTCATCAAATTATGAGCTTTAACCAGTTGAGTATTGAGTTCTTCTAGCCATAGATTTCTATCAGCTGTGAGGC CAGCCATCTCATCAAGTGTGATCATCCCCACGTCTCCCCTTATCACAATGGGGGGTTTCCTCCCATACAAGACTTCGAAAGGCGTAGGTCTCGTGGCACC TATTAACAACCTCAGTTTGACCATCCGTTTGGGATGGTAAGCTAGACTAAACTTCAGCTTTGTACCTACTAACTTGAACAATTCAGACCAAAAATTGCTC AAGAAAAATTTGTCTCTATCTGACACTATAGTGGAGGGAAATCCATGGAGCTTGACCACCTCTTGGACATAGATTTCAGCCTCATCATTGGCTTTATAGG GATGTGCTAAGTCATCCTATCAACTATCAACTACAATCAGGATGGTGTCTTTCCCCATTACCTTCGGAAGCCCCCTACAAAATCCATGGAGATATTGGAC CAAACTAGGGCTTAGAACTTGGTACTTATTTCTCTGGTGTACTTCACATTGTTGGACATATTGTTTTATGGAGGATTCCATTCCCTCCCAATTAAGGGTT GTCGAAATCCATTTCTAAATTCTGAAATACCCAGAATGACCTCCTACGGTTGAATCATGAAACTCATGCAAAATTAAGGGAATCTTAGAGGAGTGGTTGG GATTACCATTATGTTTTTGTAGTATAGTCGGCCCTTGATGAGATGAAATCCAACATGTGTCTTTTGGTCCTTCATCAAGTCTTGCATGATTTTCTTTAAT TTAGGATCCTGCAAAACTTCCCACATGATGCACTGGACTGAGGAAATTGCTGCAAATTGCATCTTCCTAAAGAGAGCATCAACAACTTTATTCTTGGTTC CTGGTTTGTATTTGATCTCAAAATCATATCCAAGTAACTTTGCCATCTATTTATGTTGACCCTCATTGATAATGTTCTGTTCAATCAAATATCTAAGGCT TTTTTTATCAGAATGTACCTTAAAATGCCTCCCTAGAAGGTAGTGGTGCCATTTTTTTACTGCAAAGACAATGACCATCAATTCCTTCTGATATAGAGAT TTCCGCTATGCAATTTCTGATAGTGCTTCGCTCATGTATGCTAGGGGCTTTCCACCTTGCATGAGAACACCTCCTATGCCACTTCCTGATGTCTCAGTTT CGATCACAAACTCTTTTTCAAAATCCGGAATAGCCAAAATAGAAATCTTAGTCATGGCTTCCTTCAAATTGTCAAAAAATATGTGCCTAATAAAAATGAC ACTGAACTGATTTTCATACTTCATCTTTTTTGCATATGTTTTAGGTGGATGATTTTCAGTCCCTATTAGAGAATGACAGTGTGGAGGTCGAAGAGACAGT GAAGAGTTATACTGATGAACTATCTGGAAAGCTACTGTATATGGAGCAGCAACTGGAATCACTTCTTGATGCTGTAGTGTCCAATTGTAGGCCCATGACC CTTGTTGAGAAGCAGCAGCTTCAGAGATTAATTCAGAAGCTACCAGCAGAAAATCTTGACCGTGTCGTGCAGATAATTTGTCGAAGTAGGCCGGTGAAAG AACAAAAAACAGATAAAATATTTGTTGATCTGGAAAAAGAGGATAATGCTACACTCTGGAGACTGTATTACTATATTGAAGCTTTTGAGAAAGCCAAAAT ACTCTCTAGTTAGTGTTCAAGAAAGCCTAGTTTTTATGATTTTGAAATCAGCAATTCTAGTTCATTACAGCTATTTTGTAGAGAGCAGAAATATTTAGTT GGTTCTTTGTTCTCTTCTTTTGCTTGTATATTTTTAGAAATTAATCACCAAAAATATTTTTTGCTGATTCTTATGGAATATATCTATCTCCTTTTGATAG CAAAAATATTTTTTTCATTCTTATTTGGTTTTTAATATAATGCTTAGTTTAAACATGTGTCTGTTGTGATGAACTTCATGAACCCTTGAAGTTCTTTTGA TTACTGTTATTTTAGCCCCACATCATGAAAGTAACCCCATTCTTTATGAACCTAGGATGTGGCTGTGGCTGTGGCCTCCATAGTGTTCTCCATCTTCCAC ACCTTATTCGCCATTAACTCCGAAAATAGCAGAACATCATCGGTCATGTTCCCTGGAGCCGTCACCGGAATTTGTAAGATATGGCTTTCTATGGCCAACC CAGATATGCTTTATTTTCTGTTAAGATTTGTTGGTGTCTTGAATTTCTATCATTGCATACATGATTTATCTTGCAAGCACATGAAGAAAGTAATAACTCA CTCAACACTACTTACTATAAACAGTCTCTTCATGCTTCTGGATTCAATGTTGGCATTGACACACTTTAATTCCCAAAATATTCAATTCTATAAGAAATTT GGCTACCAAAATAATAGAAGGAAATCTGCACATTAATTTCAACTTCAAGAGTGAAAAATTACATCAGCATATATTTACTAATATTCTTTCATATATCTGC TGGGAATGGGTTTGTCACATTACGTTGTTTGAACATTGATTATGTTAAGGTAGTTTTGAATTTGATTCACTGTTGATAGAATTAGCTCCACATACCTGTG GATATTCCCGATTTTGATATAATTACTAGTATGAGGATACATGTGAAAAACAAAAAAATAGCAACTACCAAAGAGTTTGAAGATTTCAAATCACTTTCTA CGCTATTATTACTATCAATTATTAATTTCATGGTTATATGTATTGAATGATGTCATAAGGTTCTCTCTTAAATTATATTCAGAAGACATTTATCTCTATT TTTTAGTATTTTTGAAAGTGTAATTCTATCATTTTCACTAATACATTCATTTTTAATTTTACTTCATCTAGTTGTTTACTTAACCAACACAACATTCTCA TATCTACTACATAGAGTCTATTATCTTGTTGACATTTTATCATCCAACATTCAGTATTATATAACACTGCAAGTCTTATAGACGTATAGTAAAACTTCC BLAST |
Tissue | flowers |
Gene name | LI_gene_83044; |
Additional information | - |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_255391
Blastp | - |
---|---|
Blastx | Retrovirus-related Pol polyprotein from transposon 17.6 from Sophophora with 42.34% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_017438495.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |