Id Trinity | FTRINITY_DN59128_c2_g1_i27 |
---|---|
Name Transcript | Ll_transcript_255868 |
Sequence | ATGATCTTGGCATGTATGAAATAATGCAATTAAGCAACGACATCGTTTAGTTCCCCAGATGCATAGATTCGTCTCCTACTTACTACTCCTTTCTCTCTCT TAACACTGGCAAAGGGCTTCTCTCACACTCAAGAGAAGTTTCATAAAAAAGAAATAAATCCAAAACAATCACAGAAAGGGGGCATTCCAGTAATTTCACA CTCTCGATGTTCACCTCCACACACTTGAACAACAACAACAACGACACCCCTTTCCTCTCCGGCGGTGGCGGCCTCCGCGCCACCTTCTCCTCCTTGATGG CCGACGCGGCCATCCGATCCTCTCCGGTCGTCATATTCACGGCAGTCGCTGGACTCGCTCTCGTCGCCGTCATCTTCTACGGTACCAGTAGGTAAAAAAC CAGAACTAACGTTCAAATGCTATACAAAAACCCTAGCTTCTGTTTTCGATTTTGATTTTGTTCAACTAAAAAGGAAAAATAACTGTAAATTATATAGAAG GAAAATTTTCATAGATGAATCCCCTTAGCCTTAGGCGAAGTCATAATCCCTCTTCAATTTCCTCTCATTCGTCATCGTCTTGGATTCATCTGCCTTCGAT TATATTCGTTGTTACTTTTTCCTCACCAGCTTCTTCTTCACCCTCTTCTTCTGATCGATCTTGCTGTCAGTGTCAGCTTGTGTGTTTTGCGTTATTGTGG TTCACAGTATCTGTTTTCGGTCTCTTCAAAGTTTCCGATCGTGTGGTTCGCTGCTAGAATCGTCCATTTTGGTTGGACCACAATGCTCAAAAAGAAAAAA AAAGAAGCAAATTTGGTTTGTCTGTGAAAGGAGAAGAGGGTTGAGGAGAGATAGATCTTTTGGTTTTCCTGAGAGGGAGATACATACACTTCTTCAGTCT GAACTTCCTTTCCTATCATTCCCTTTTCTCATGTCAAATCAATTGCACTGAAGAAATCATCTTTGTTTGGAGAAAATGCAACTTAATTGTTATCTGCATT GAATATATCTACATACCTGCTTTAGCATTATATATATTCTTTGTATTGTGTCTTCTTAAGATGGAAAGGGGGATCTATGCTAGAGTATATTTAGTGAGAA TGTTCATTTGGAGGCTGGATAAATTTTTTTCTCGACCAAAATATACTTTCGCTGTCTAAAAGATTCAAGAGAATATATTCTAGTCATTGGTCTACGAAGG GGATATTGGTGAAACGGTTAAAGTCCTTCTCAAGCCAAGGAAATCATGGGTTTGAGTTGTGGAATCAGCCCTTTCCTGGACCCTGCACATGTTGGGACTT TTGTTGCACCAAATTGCCCTATTTAGTTGCAATCTGTCAATCTACCTGCCGTGTCAAGGATCATAGTTAGGGGCTTTAAATAATCTGGATTTTTCTCCAG ATATGTGTGTGAGAGCTGGTTTATGACAAAACATAATGCTCTTGTTTAATTAATGTAGCTGACCACACATAGTGGAAAAGCCAAAAAGGCTTTGTTGTCG CTGTTGTTGATGATATCTTCAAGCCTTCAAGCTCAAGGACAATCATTTATAATTTATACCTCTTCCATTTTAAAACAAATATAATTAAATCTTGTGTTCT TGTCCCCATAAATTTTATGCTTGTCATTGTTCTAGTCCCTATAAATTTTATACTTGTGATTGTTCTAGTCCTTCCTCGTCCTCATAATAATAATAAATAT ATGAGAGGGGACTCATTTACTCCAAGAGTAAGTTTGAAAAACCTACTCCACATCTTAGCCATCCATTCTAGGGAAACTGAATGGTTCAGATCCACTACTA ATTCAAATCATTGGATTTCCCTAGAATGAATGACTAAGATATGAGTAAGTTCTTTTTAACTTACTCATAGAGTAAGTGGATCCCCTCCCTAAATAAATTA CAGAAGTTAAAAATTCAATTGATCATAGGTGATTCTGTAATACTTTGGTTGGGATTTGTTATCAGCTGTTTTGATTTTCTAAGGCTTTGTTGAATAACTT TACCAGTAAACAGAGACCCCATTGATGAAATAAGTAGTAGAGCGGTGCTTCTCAACTTGATGTAGTTAGTTTTCATATGTAGATAGAATTAGGTTGTACG AAGTGGATTTATGTGTTTTAGCAATTAGCACAAATGAAATAAGATAGTTAAACATAAACCATTTAACTCCAAAATCTATGAACACTAACAAAAAAATGTA TCAAATGTGACAAAACAATAACCTAATAAACATAGATTTGTTATTGTAAGAACTAAAATATTGTATATGCTTGAAAAAGTTGATTGATCTAGTATAATAG AGCGCTGTGATGTGCTTTTAATCTTGAAGAAGATCAATTTCTATGTACTTTTTTACTCCCCTAAATTTCTTAAATGATTCTTTGCTACTTATTCTCTATT CCAAAACTCATATCCAGGTAGTTGTAATGAGTAATTCTTTTGGGCAAAATTCCAGGGGCCGTCTTAAATCACCATGGTCACGTAGGAAAAGAAAACGTGT CCTTTCATGTCCCCAATGGAAAAGCTTGTTTACAGAAGATGGGAGACTCTGTGATGGTGGAATTAAGTTCCTGAAAAGAGTTCGCAGTGGAGTGAGTTTA CCAGTCTTTTTATCTAGATTTTAAATTTGTATTTCTTTGTTGAATTAATGACACTATATTTGATGCAGGGTGTTGATCCTAGTATTAGGGCTGAAGTTTG GCCTTTCCTACTTGGAGTGTAAGCATGCCATATTTCTTGTTTCATTTCTGATTGAACTTTACTATTTAATTTTTTTGCTAGCATACTTAGGATCTAGGAA GTACGGACAATCATGAGATATAATTACACATGGAGCAAAATCTGTTACCATTTATATTCATGAAATGGCATTGATATCTCTTGTTGTAGGATTTAATTTC ACTTGACACCCTCTTATTTCAGAGGTTATACTCACCTCCCTTCAATTATCGTTGCACTTAAATTATTAGCTTTTAAAATATGAGGGTACCAAGTGTAATC AGGGGAGGTTAGTGTAATTTACCCTTAATATTAATATTTGAAGTGTCAAGCATTGTAATGCTGTCTTGCTCTTTTGAAATTCAAAGTGTCTGTGCTTCAT AGCTTGGTTGGAATGAATACTGATTATCTTTCAGCTTGTAATAGCTGAAACTTGGTTATTTGCTTTAGGGCAAATATTGATTATGGGAATGGATCCTCTC GGTTGTTTTTTCTAGTCAAGTGGTCAGGTAGAGGAGAGAGATAAACACAGGTTATAAAAGAAATTTCACATATCATGCCTGAGCCCACTAAATAAATCTT TTTGTGCCAAGAAAAAAACAATTGGCTGGGTCCATTTTAATGGGTCACCTTCTCTTTTATTTTGTGTGTGATTTGTTACTTTCGGTTCATTTCTGCATGT ATCCTTTTGTATAGGTTAACTTTTGTATGGTTATTGATTACACATTCACTTACGCAGCTATGACTTGGACAGTACCAAAGCAGAACGAGATGCAATAAAA AATCAAAATAGAAAGGAATATGAGAAACTCCGCAGACAGTGCCGACAACTTCTAAAGCAGAGCAATGGAAGCTTCAAGTTAAATGAAAGTGGTGAAATCA GCTATGAAGGAGATGGTGCAAGTCTTGGTCAAGATTCTGGTTCTCCTAACTCTGAAGATGCAACAAGTGCCAGGGAATCCCTTTCTAGTGAGGAAAGGAG CCCAGATACTGAGTATTCGGATGATCCATCTAGTGCCCTGTTGGAAGGATATGATGTTCTGAATATTAGCAATGCTGATATATCTGCACTGGATACTGAT TCCTCCGATTCAGACTCCTCAGAAGGTCTTGAAGTGATTCAGGCATTACCTTCTGATGATGTTCGAGGAGAGAACAATTCCAAGAGAATTTCCAAGGTAA ATTCTTCTCTCTCACCAAGGAAAGCCACATCGAAACTACGAACTAGTGAAGATTTTCCCACATGGCAACGAATCATCAGACTTGATGCATTACGTGCCAA TGCAGAATGGTTGCCATACTCCCCCTCCCAAGCTACCGTAACGGGAAGTAGGGCACATCGTTCTGCGGAGGCTGTTGGTTTGAAGGATTATGGTCACCTA GAGGCCAGCAGAATCTTTCATGCTGCTCGACTAGTTGCTATTCTTGAAGCATATGCACTGTATGACCCTGAAATTGGCTACTGCCAGGGTATGAGTGATC TGCTATCTCCCATAGTTAGTGTTATACCAGAAGATCATGAGGCTTTCTGGTGTTTTGTTGGATTCATGAAGAAGGCAAGGCAGAATTTCAGGCTTGATGA GGTGGGTATTAGGAGGCAACTCGATATAGTTGCAAAGATAATCAAGTTTAAGGATGGCCACTTGTTTAAACATTTGGAGATGCTCCAGGCCGATGATTGC TTTTTCGTGTATAGAATGGTGGTGGTGTTGTTTAGAAGGGAGTTGACATTTGAACAGACTCTCTGCCTTTGGGAAGTAATGTGGGCAGATCAAGCAGCAA TCAGGGCAGGTATCGGGAAATCTGCATGGAGCAGAATTAGGCTGCGTGCGCCACCAACTGAGGATTTATTGCTTTATGCCATAGCAGCTTCAGTGTTACA GCGGAGGAAGTTAATCATCGAGAAGTATAGCAGCATGGATGAGATCATCAAGGAATGCAATGGCATGGCAGGACATCTTGATGTTTGGAAGTTGCTAGAT GATGCACATAACTTGGTGGTCAGCCTTAATGACAAAATAAAATTGAGACAATGAATGAAGCTGTTACTTAAAAGAACTACTTTATCTTTACGTCCATGGT GCCAGATTTCTCCTCTGCATCTGAAAATAAGCACTGCAATGCCAAATTTATTACTTTGAGATCTGCTGCTTCCTTAAAACTCCTCACTGCTAATTTACAA GTCTTTATTTAGTTCTGACAATGTTGGCTTATGTGGAAGGAAGCTGGGGGAGTGGATATATGTGGCATCCTTTTCTTTTCATTTTGCCTTTTTCATTCTT TTTTATGTTCCCATACTTTTCTGTGTTTGTTTAAAAACCCTGATTTGAGACACATCTTGGAGCACCTTTGCTAAAAGCAGGTGGTGGGTAGCATGTAACC TTTGTCTGTTAAAAGAGGTTGAGATATTATGAACAACTATGATGTTGTCTCTTTTGACTTGAATTCATAAGTTATTTGACTCTTTCAGCTGTTGGCCAAG TGAAGGAGCCCGTTTCATAGAAGCATAAATAATGTAGCAGGATTTTTATATTATTAATAAACCCTTGAAGATTGTCCC BLAST |
Tissue | flowers |
Gene name | LI_gene_83061; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_255868
Blastp | GTPase-activating protein GYP7 from Yarrowia with 31.95% of identity |
---|---|
Blastx | GTPase-activating protein gyp7 from Schizosaccharomyces with 32.09% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (YALI0F31911g) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417095.1) |
Pfam | Rab-GTPase-TBC domain (PF00566.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |