| Id Trinity | FTRINITY_DN59128_c2_g1_i28 |
|---|---|
| Name Transcript | Ll_transcript_255869 |
| Sequence | ATGATCTTGGCATGTATGAAATAATGCAATTAAGCAACGACATCGTTTAGTTCCCCAGATGCATAGATTCGTCTCCTACTTACTACTCCTTTCTCTCTCT TAACACTGGCAAAGGGCTTCTCTCACACTCAAGAGAAGTTTCATAAAAAAGAAATAAATCCAAAACAATCACAGAAAGGGGGCATTCCAGTAATTTCACA CTCTCGATGTTCACCTCCACACACTTGAACAACAACAACAACGACACCCCTTTCCTCTCCGGCGGTGGCGGCCTCCGCGCCACCTTCTCCTCCTTGATGG CCGACGCGGCCATCCGATCCTCTCCGGTCGTCATATTCACGGCAGTCGCTGGACTCGCTCTCGTCGCCGTCATCTTCTACGGTACCAGTAGGTAAAAAAC CAGAACTAACGTTCAAATGCTATACAAAAACCCTAGCTTCTGTTTTCGATTTTGATTTTGTTCAACTAAAAAGGAAAAATAACTGTAAATTATATAGAAG GAAAATTTTCATAGATGAATCCCCTTAGCCTTAGGCGAAGTCATAATCCCTCTTCAATTTCCTCTCATTCGTCATCGTCTTGGATTCATCTGCCTTCGAT TATATTCGTTGTTACTTTTTCCTCACCAGCTTCTTCTTCACCCTCTTCTTCTGATCGATCTTGCTGTCAGTGTCAGCTTGTGTGTTTTGCGTTATTGTGG TTCACAGTATCTGTTTTCGGTCTCTTCAAAGTTTCCGATCGTGTGGTTCGCTGCTAGAATCGTCCATTTTGGTTGGACCACAATGCTCAAAAAGAAAAAA AAAGAAGCAAATTTGGTTTGTCTGTGAAAGGAGAAGAGGGTTGAGGAGAGATAGATCTTTTGGTTTTCCTGAGAGGGAGATACATACACTTCTTCAGTCT GAACTTCCTTTCCTATCATTCCCTTTTCTCATGTCAAATCAATTGCACTGAAGAAATCATCTTTGTTTGGAGAAAATGCAACTTAATTGTTATCTGCATT GAATATATCTACATACCTGCTTTAGCATTATATATATTCTTTGTATTGTGTCTTCTTAAGATGGAAAGGGGGATCTATGCTAGAGTATATTTAGTGAGAA TGTTCATTTGGAGGCTGGATAAATTTTTTTCTCGACCAAAATATACTTTCGCTGTCTAAAAGATTCAAGAGAATATATTCTAGTCATTGGTCTACGAAGG GGATATTGGTGAAACGGTTAAAGTCCTTCTCAAGCCAAGGAAATCATGGGTTTGAGTTGTGGAATCAGCCCTTTCCTGGACCCTGCACATGTTGGGACTT TTGTTGCACCAAATTGCCCTATTTAGTTGCAATCTGTCAATCTACCTGCCGTGTCAAGGATCATAGTTAGGGGCTTTAAATAATCTGGATTTTTCTCCAG ATATGTGTGTGAGAGCTGGTTTATGACAAAACATAATGCTCTTGTTTAATTAATGTAGCTGACCACACATAGTGGAAAAGCCAAAAAGGCTTTGTTGTCG CTGTTGTTGATGATATCTTCAAGCCTTCAAGCTCAAGGACAATCATTTATAATTTATACCTCTTCCATTTTAAAACAAATATAATTAAATCTTGTGTTCT TGTCCCCATAAATTTTATGCTTGTCATTGTTCTAGTCCCTATAAATTTTATACTTGTGATTGTTCTAGTCCTTCCTCGTCCTCATAATAATAATAAATAT ATGAGAGGGGACTCATTTACTCCAAGAGTAAGTTTGAAAAACCTACTCCACATCTTAGCCATCCATTCTAGGGAAACTGAATGGTTCAGATCCACTACTA ATTCAAATCATTGGATTTCCCTAGAATGAATGACTAAGATATGAGTAAGTTCTTTTTAACTTACTCATAGAGTAAGTGGATCCCCTCCCTAAATAAATTA CAGAAGTTAAAAATTCAATTGATCATAGGTGATTCTGTAATACTTTGGTTGGGATTTGTTATCAGCTGTTTTGATTTTCTAAGGCTTTGTTGAATAACTT TACCAGTAAACAGAGACCCCATTGATGAAATAAGTAGTAGAGCGGTGCTTCTCAACTTGATGTAGTTAGTTTTCATATGTAGATAGAATTAGGTTGTACG AAGTGGATTTATGTGTTTTAGCAATTAGCACAAATGAAATAAGATAGTTAAACATAAACCATTTAACTCCAAAATCTATGAACACTAACAAAAAAATGTA TCAAATGTGACAAAACAATAACCTAATAAACATAGATTTGTTATTGTAAGAACTAAAATATTGTATATGCTTGAAAAAGTTGATTGATCTAGTATAATAG AGCGCTGTGATGTGCTTTTAATCTTGAAGAAGATCAATTTCTATGTACTTTTTTACTCCCCTAAATTTCTTAAATGATTCTTTGCTACTTATTCTCTATT CCAAAACTCATATCCAGGTAGTTGTAATGAGTAATTCTTTTGGGCAAAATTCCAGGGGCCGTCTTAAATCACCATGGTCACGTAGGAAAAGAAAACGTGT CCTTTCATGTCCCCAATGGAAAAGCTTGTTTACAGAAGATGGGAGACTCTGTGATGGTGGAATTAAGTTCCTGAAAAGAGTTCGCAGTGGAGTGAGTTTA CCAGTCTTTTTATCTAGATTTTAAATTTGTATTTCTTTGTTGAATTAATGACACTATATTTGATGCAGGGTGTTGATCCTAGTATTAGGGCTGAAGTTTG GCCTTTCCTACTTGGAGTGTAAGCATGCCATATTTCTTGTTTCATTTCTGATTGAACTTTACTATTTAATTTTTTTGCTAGCATACTTAGGATCTAGGAA GTACGGACAATCATGAGATATAATTACACATGGAGCAAAATCTGTTACCATTTATATTCATGAAATGGCATTGATATCTCTTGTTGTAGGATTTAATTTC ACTTGACACCCTCTTATTTCAGAGGTTATACTCACCTCCCTTCAATTATCGTTGCACTTAAATTATTAGCTTTTAAAATATGAGGGTACCAAGTGTAATC AGGGGAGGTTAGTGTAATTTACCCTTAATATTAATATTTGAAGTGTCAAGCATTGTAATGCTGTCTTGCTCTTTTGAAATTCAAAGTGTCTGTGCTTCAT AGCTTGGTTGGAATGAATACTGATTATCTTTCAGCTTGTAATAGCTGAAACTTGGTTATTTGCTTTAGGGCAAATATTGATTATGGGAATGGATCCTCTC GGTTGTTTTTTCTAGTCAAGTGGTCAGGTAGAGGAGAGAGATAAACACAGGTTATAAAAGAAATTTCACATATCATGCCTGAGCCCACTAAATAAATCTT TTTGTGCCAAGAAAAAAACAATTGGCTGGGTCCATTTTAATGGGTCACCTTCTCTTTTATTTTGTGTGTGATTTGTTACTTTCGGTTCATTTCTGCATGT ATCCTTTTGTATAGGTTAACTTTTGTATGGTTATTGATTACACATTCACTTACGCAGCTATGACTTGGACAGTACCAAAGCAGAACGAGATGTTATAAAA ACTCAAAATAGAAAGGAATATGAGAAACTCCGCAGACAGTGTCGAAAGCAGCTAAAGCAGAGCAATGGAAGCTTCAAGTTAAATGAAAGTGGTGAAGTTA GCTATGAAAGAGATGGTGCAAGTCTTGTTCAAGATTCAGGTTCTGAAGATGCAATGAGTGCCAGGGAATCCCTTTCTAGTGAGGAAAGGAGCCCAGATAC TGAGTATTCGGATGATCCATCTAGTGCCCTGCTGGAAGTTAGCAATTCTGATACCTTCGCAGTGGATACTGATTCCTCTGATTCAGACTCCTCAGAAGGT CTGGAGGTGATTCAGGCATTTCCTTCTGATGTTGTCCAGGAAGAGAACAATTCCAAGGGAGATTCTTCTCCCTCCCAAAGGGAAGTCCCATCAAAACTAC GAACTAATGAAGATTTTCCCACATGGCAACGAATTATCCGACTTGATGCGGTTCGTGCCAATGCAGAATGGATGCCATACTCCCCCTCCCAAGCTATTGT AACGGACAGTAGGGCACATCGTTCTGCTGAGGCTGTTGGATTGAAGGATTATGGTCACCTAGAGGCTGGCAGAATCTTTCATGCTTCTCGACTAGTTGCT ATTCTTGAAGCATATGCACTATACGACCCTGAAATTGGCTACTGCCAGGGTATGAGTGATCTGTTATCTCCCATAATTAGTGTTATACCAGAAGATCATG AGGCTTTCTGGTGTTTTGTTGGATTCATGAAGAAGGCAAGGCAGAATTTCAGGCTTGATGAGGTGGGTATTAGGAGGCAACTCGATATAGTTGCAAAGAT AATCAAGTTTAAGGATGGCCACTTGTTTAAACATTTGGAGATGCTCCAGGCCGATGATTGCTTTTTCGTGTATAGAATGGTGGTGGTGTTGTTTAGAAGG GAGTTGACATTTGAACAGACTCTCTGCCTTTGGGAAGTAATGTGGGCAGATCAAGCAGCAATCAGGGCAGGTATCGGGAAATCTGCATGGAGCAGAATTA GGCTGCGTGCGCCACCAACTGAGGATTTATTGCTTTATGCCATAGCAGCTTCAGTGTTACAGCGGAGGAAGTTAATCATCGAGAAGTATAGCAGCATGGA TGAGATCATCAAGGAATGCAATGGCATGGCAGGACATCTTGATGTTTGGAAGTTGCTAGATGATGCACATAACTTGGTGGTCAGCCTTAATGACAAAATA AAATTGAGACAATGAATGAAGCTGTTACTTAAAAGAACTACTTTATCTTTACGTCCATGGTGCCAGATTTCTCCTCTGCATCTGAAAATAAGCACTGCAA TGCCAAATTTATTACTTTGAGATCTGCTGCTTCCTTAAAACTCCTCACTGCTAATTTACAAGTCTTTATTTAGTTCTGACAATGTTGGCTTATGTGGAAG GAAGCTGGGGGAGTGGATATATGTGGCATCCTTTTCTTTTCATTTTGCCTTTTTCATTCTTTTTTATGTTCCCATACTTTTCTGTGTTTGTTTAAAAACC CTGATTTGAGACACATCTTGGAGCACCTTTGCTAAAAGCAGGTGGTGGGTAGCATGTAACCTTTGTCTGTTAAAAGAGGTTGAGATATTATGAACAACTA TGATGTTGTCTCTTTTGACTTGAATTCATAAGTTATTTGACTCTTTCAGCTGTTGGCCAAGTGAAGGAGCCCGTTTCATAGAAGCATAAATAATGTAGCA GGATTTTTATATTATTAATAAACCCTTGAAGATTGTCCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_83061; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_255869
| Blastp | GTPase-activating protein gyp7 from Schizosaccharomyces with 30.8% of identity |
|---|---|
| Blastx | GTPase-activating protein gyp7 from Schizosaccharomyces with 32.09% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (SPAC630.05) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415267.1) |
| Pfam | Rab-GTPase-TBC domain (PF00566.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |