| Id Trinity | FTRINITY_DN59128_c2_g1_i30 |
|---|---|
| Name Transcript | Ll_transcript_255871 |
| Sequence | ATGATCTTGGCATGTATGAAATAATGCAATTAAGCAACGACATCGTTTAGTTCCCCAGATGCATAGATTCGTCTCCTACTTACTACTCCTTTCTCTCTCT TAACACTGGCAAAGGGCTTCTCTCACACTCAAGAGAAGTTTCATAAAAAAGAAATAAATCCAAAACAATCACAGAAAGGGGGCATTCCAGTAATTTCACA CTCTCGATGTTCACCTCCACACACTTGAACAACAACAACAACGACACCCCTTTCCTCTCCGGCGGTGGCGGCCTCCGCGCCACCTTCTCCTCCTTGATGG CCGACGCGGCCATCCGATCCTCTCCGGTCGTCATATTCACGGCAGTCGCTGGACTCGCTCTCGTCGCCGTCATCTTCTACGGTACCAGTAGGTAAAAAAC CAGAACTAACGTTCAAATGCTATACAAAAACCCTAGCTTCTGTTTTCGATTTTGATTTTGTTCAACTAAAAAGGAAAAATAACTGTAAATTATATAGAAG GAAAATTTTCATAGATGAATCCCCTTAGCCTTAGGCGAAGTCATAATCCCTCTTCAATTTCCTCTCATTCGTCATCGTCTTGGATTCATCTGCCTTCGAT TATATTCGTTGTTACTTTTTCCTCACCAGCTTCTTCTTCACCCTCTTCTTCTGATCGGTGAGTTTTTCTTATTCTTCTACTCTTCCATTTTGATTTTTTT AATGATTCAACATTAAGATTTATTTGAACTCAGATTTCTATACTTTCTGTTTTTATTTTCGTGCCAGATCTTGCTGTCAGTGTCAGCTTGTGTGTTTTGC GTTATTGTGGTTCACAGTATCTGTTTTCGGTCTCTTCAAAGTTTCCGATCGTGTGGTTCGCTGCTAGAATCGTCCATTTTGGTTGGACCACAATGCTCAA AAAGAAAAAAAAAGAAGCAAATTTGGTTTGTCTGTGAAAGGAGAAGAGGGTTGAGGAGAGATAGATCTTTTGGTTTTCCTGAGAGGGAGATACATACACT TCTTCAGTCTGAACTTCCTTTCCTATCATTCCCTTTTCTCATGTCAAATCAATTGCACTGAAGAAATCATCTTTGTTTGGAGAAAATGCAACTTAATTGT TATCTGCATTGAATATATCTACATACCTGCTTTAGCATTATATATATTCTTTGTATTGTGTCTTCTTAAGATGGAAAGGGGGATCTATGCTAGAGTATAT TTAGTGAGAATGTTCATTTGGAGGCTGGATAAATTTTTTTCTCGACCAAAATATACTTTCGCTGTCTAAAAGATTCAAGAGAATATATTCTAGTCATTGG TCTACGAAGGGGATATTGGTGAAACGGTTAAAGTCCTTCTCAAGCCAAGGAAATCATGGGTTTGAGTTGTGGAATCAGCCCTTTCCTGGACCCTGCACAT GTTGGGACTTTTGTTGCACCAAATTGCCCTATTTAGTTGCAATCTGTCAATCTACCTGCCGTGTCAAGGATCATAGTTAGGGGCTTTAAATAATCTGGAT TTTTCTCCAGATATGTGTGTGAGAGCTGGTTTATGACAAAACATAATGCTCTTGTTTAATTAATGTAGCTGACCACACATAGTGGAAAAGCCAAAAAGGC TTTGTTGTCGCTGTTGTTGATGATATCTTCAAGCCTTCAAGCTCAAGGACAATCATTTATAATTTATACCTCTTCCATTTTAAAACAAATATAATTAAAT CTTGTGTTCTTGTCCCCATAAATTTTATGCTTGTCATTGTTCTAGTCCCTATAAATTTTATACTTGTGATTGTTCTAGTCCTTCCTCGTCCTCATAATAA TAATAAATATATGAGAGGGGACTCATTTACTCCAAGAGTAAGTTTGAAAAACCTACTCCACATCTTAGCCATCCATTCTAGGGAAACTGAATGGTTCAGA TCCACTACTAATTCAAATCATTGGATTTCCCTAGAATGAATGACTAAGATATGAGTAAGTTCTTTTTAACTTACTCATAGAGTAAGTGGATCCCCTCCCT AAATAAATTACAGAAGTTAAAAATTCAATTGATCATAGGTGATTCTGTAATACTTTGGTTGGGATTTGTTATCAGCTGTTTTGATTTTCTAAGGCTTTGT TGAATAACTTTACCAGTAAACAGAGACCCCATTGATGAAATAAGTAGTAGAGCGGTGCTTCTCAACTTGATGTAGTTAGTTTTCATATGTAGATAGAATT AGGTTGTACGAAGTGGATTTATGTGTTTTAGCAATTAGCACAAATGAAATAAGATAGTTAAACATAAACCATTTAACTCCAAAATCTATGAACACTAACA AAAAAATGTATCAAATGTGACAAAACAATAACCTAATAAACATAGATTTGTTATTGTAAGAACTAAAATATTGTATATGCTTGAAAAAGTTGATTGATCT AGTATAATAGAGCGCTGTGATGTGCTTTTAATCTTGAAGAAGATCAATTTCTATGTACTTTTTTACTCCCCTAAATTTCTTAAATGATTCTTTGCTACTT ATTCTCTATTCCAAAACTCATATCCAGGTAGTTGTAATGAGTAATTCTTTTGGGCAAAATTCCAGGGGCCGTCTTAAATCACCATGGTCACGTAGGAAAA GAAAACGTGTCCTTTCATGTCCCCAATGGAAAAGCTTGTTTACAGAAGATGGGAGACTCTGTGATGGTGGAATTAAGTTCCTGAAAAGAGTTCGCAGTGG AGTGAGTTTACCAGTCTTTTTATCTAGATTTTAAATTTGTATTTCTTTGTTGAATTAATGACACTATATTTGATGCAGGGTGTTGATCCTAGTATTAGGG CTGAAGTTTGGCCTTTCCTACTTGGAGTGTAAGCATGCCATATTTCTTGTTTCATTTCTGATTGAACTTTACTATTTAATTTTTTTGCTAGCATACTTAG GATCTAGGAAGTACGGACAATCATGAGATATAATTACACATGGAGCAAAATCTGTTACCATTTATATTCATGAAATGGCATTGATATCTCTTGTTGTAGG ATTTAATTTCACTTGACACCCTCTTATTTCAGAGGTTATACTCACCTCCCTTCAATTATCGTTGCACTTAAATTATTAGCTTTTAAAATATGAGGGTACC AAGTGTAATCAGGGGAGGTTAGTGTAATTTACCCTTAATATTAATATTTGAAGTGTCAAGCATTGTAATGCTGTCTTGCTCTTTTGAAATTCAAAGTGTC TGTGCTTCATAGCTTGGTTGGAATGAATACTGATTATCTTTCAGCTTGTAATAGCTGAAACTTGGTTATTTGCTTTAGGGCAAATATTGATTATGGGAAT GGATCCTCTCGGTTGTTTTTTCTAGTCAAGTGGTCAGGTAGAGGAGAGAGATAAACACAGGTTATAAAAGAAATTTCACATATCATGCCTGAGCCCACTA AATAAATCTTTTTGTGCCAAGAAAAAAACAATTGGCTGGGTCCATTTTAATGGGTCACCTTCTCTTTTATTTTGTGTGTGATTTGTTACTTTCGGTTCAT TTCTGCATGTATCCTTTTGTATAGGTTAACTTTTGTATGGTTATTGATTACACATTCACTTACGCAGCTATGACTTGGACAGTACCAAAGCAGAACGAGA TGCAATAAAAAATCAAAATAGAAAGGAATATGAGAAACTCCGCAGACAGTGCCGACAACTTCTAAAGCAGAGCAATGGAAGCTTCAAGTTAAATGAAAGT GGTGAAATCAGCTATGAAGGAGATGGTGCAAGTCTTGGTCAAGATTCTGGTTCTCCTAACTCTGAAGATGCAACAAGTGCCAGGGAATCCCTTTCTAGTG AGGAAAGGAGCCCAGATACTGAGTATTCGGATGATCCATCTAGTGCCCTGTTGGAAGGATATGATGTTCTGAATATTAGCAATGCTGATATATCTGCACT GGATACTGATTCCTCCGATTCAGACTCCTCAGAAGGTCTTGAAGTGATTCAGGCATTACCTTCTGATGATGTTCGAGGAGAGAACAATTCCAAGAGAATT TCCAAGGTAAATTCTTCTCTCTCACCAAGGAAAGCCACATCGAAACTACGAACTAGTGAAGATTTTCCCACATGGCAACGAATCATCAGACTTGATGCAT TACGTGCCAATGCAGAATGGTTGCCATACTCCCCCTCCCAAGCTACCGTAACGGGAAGTAGGGCACATCGTTCTGCGGAGGCTGTTGGTTTGAAGGATTA TGGTCACCTAGAGGCCAGCAGAATCTTTCATGCTGCTCGACTAGTTGCTATTCTTGAAGCATATGCACTGTATGACCCTGAAATTGGCTACTGCCAGGGT ATGAGTGATCTGCTATCTCCCATAGTTAGTGTTATACCAGAAGATCATGAGGCTTTCTGGTGTTTTGTTGGATTCATGAAGAAGGCAAGGCAGAATTTCA GGCTTGATGAGGTGGGTATTAGGAGGCAACTTGATATAGTTGCAAAAATAATCAAGTTTAAGGATGCACACTTGTTTAGACATTTGGAGAAGCTTCAGGC CGATGATTGCTTTTTCGTGTATAGAATGGTAGTGGTATTGTTTAGAAGGGAGTTGACATTTGAACAGACTCTTTGCCTTTGGGAAGTAATGTGGGCGGAT CAAGCAGCAATCAGGGCAGGTATTGGGAAATCTGCATGGAGCAGAATTAGGCAGCGTCCTCCGCCAACAGATGATTTATTGCTTTATGCCGTAGCAGCCT CGGTGCTACAGCGGAGGAAATTAATTATCGAGAAGTATAGCAGTATGGATGAGATCATCAAGGAATGCAATGGCATGGCAGGACATCTTGATGTTTGGAA GTTGCTAGATGATGCACATAACTTGGTGGTCACCCTTAATGACAAAATGAAATTGAGAAGTCACTCTAATGATTGAAGCATGGTCTGTTTGTGAGTTGGG TTTTGGAGGGGAATAAATGAAAATGGAAGAATTCAAACCCATTTCGAAAGTGTATTTCATGAACTTGAAGTCTTTCCTTTCCTTCCAAACCCAACTTGCA AACCAACCTTTTAAAAGCAAAACTAGTTTATCTTTACTTCCACATATGAAATAAGCATTGCAATGCTGAATCTATTACTTTGAGGTCTGCTGATTCCTTA AACTGCCATGCTAATTTACAAGGCTTTAAGTTCCAACATTGTTGGCTTATGTGGATGGAAGTTGGCTAGATTTGCATGGCATCTTTTCTTTTCTTCCTTT TTTGGTTCCCGTCCTTGTGTTTCTTTAAAAATTCTGATATCAAAAGCACCTTTGCGAAAAGCAGGTGGTGGGTAACATTTGAATGAACTCATAATTATTT GACTCTTTCAGCTGCCTATTTGCACAAGGTTTGATGATGATATGAGAATGGGATCTGGCTGCTGACTATGAAATCTTATTTTAGTCTATACATAGCTCTT TTTGTGGCGGATCTTAGTGAAAAACATCAATTATTAGGATATTTGCTAGAAGAGATTGACTCAAAAAATTAGTCTTTTATGTGAGAGAATCTAATATTTT AAGTATCACAGGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_83061; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_255871
| Blastp | GTPase-activating protein GYP7 from Yarrowia with 31.95% of identity |
|---|---|
| Blastx | GTPase-activating protein gyp7 from Schizosaccharomyces with 30.8% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (YALI0F31911g) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417095.1) |
| Pfam | Rab-GTPase-TBC domain (PF00566.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |