| Id Trinity | FTRINITY_DN59133_c1_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_255029 |
| Sequence | ATTGTTCTGAACTTCTGATATTGCAAAATTTCATTGGTATCATTCTCCCTCCCTTCTCCTCCCCAAATTGCACTCCCTCGTTAGTCTTCACGGCGCAGTT ACAGAACACACGTTTTCCGTTGACGTGAGAAGCCGTTACTCGTTTTTGTTACCTTTGCGGGACTTCACTCTCTTAAAACGATTTCAGGAGAAGAAACTAC AGCATCTGAGAAAAACACAAACACAGAAGTTACGGAAAAATAAATTGGTGCTGGTTTGGAGTGAAATTGGGGTTAAATAATTATTTGAACATTCTGTTGG AAACCTACGGTTACACAGAGAAAAAATGGATGGAAAAGATAAGAGGATTAGGGCGAAGAAGAAGAGATCGAAGCCGGTGGAAATTGGTATTGATTTGGAT GATAATGAAACCATTGGCTCTATGTTTAAGCTAAAGAGGATGAAGAAGAAGGTTAATTTGGCGGCAGAGGGGTCTTGTGGTGATGGCGGTAAGAATGGTG AGGTTGTTGGGAAAGATTCAGTTGCTGCAGAAAAGGATTTCGGAGATATGGATGATACCTTGGCGAGTTTCAGGAAGAGGTTGAAGGAACTAAAGAGAGA TCGGAGATCTGAAGCCAGTGGAGGACGGAGTTCTGCTTTGAATGTAGGGCTGGAGTCTTCTGATAGATCTTTGAATGTTTCTGTTGAGGGAATTGAGGGT CACGGTTTGTCTGGTGATGATTTCGTTGCTCAGGAATCAAGGGGCACCTTAAATAATGAGAAAGGGGTATGTTTGTTGCTTGGTGATGGCGTGGAGCACT CTTATAATGAAAATATGGAAGACTCCTTGTCAGTGATTGTCCGAAAGGCACAATCTAATTTGATTAAGAAATCACGGGCCTCTTCAAGTTCAAAGAAAAA AAGAGGGATTGAGAATGTGGATAATGACCTGAGACCTGGCTCTGAAAGTGTTCCTGAAACTATAGATTCTATGGCTGAATTTATATCTAGACCTGCTTCT GCCTTGGTATCGGTGAGGAAAGATCTGACGTGTCCCGGTTCTGTGTCACAATCATCTACTCTGGGTCAATTTTCTTCCATGTCTGTAATTGATAGAGAAA AGCATGACTGTTTTCAAGAGGGTATTGCTGAGGGCATTTGCAATTCAAACATTCCAGGTGAACCATTAGTTGATCACTGTCTCTCAACTAATGTCTGCAA AGGGGATAGACAACTTTTAAATCGGTGTTCTTCCAGGTTAGATGGTGTTGAAATGATTGATTCCACACTTCTTTCAAAATTTGGGGAGGTGGTACATGAA CATACTGAGAGTGAGTTCAAGGATAGATCGACCGATGAGCTATCACAAATGTGTAATGATGCTTCAAAACATGGTGTTTCTATTTCTATTGAGAAAGAAA ATTCCCCACCTTATCATGACACTGAGCCCTTGATTAAATCGACTGAAAGTATATTGAGTGAGAATAATTTTACGGTTTCTGGAATCTTTTTTCAGGAATC ATCAGGCAATGAAGCTCTAAAGCTTTCTGAATCCCATGTGGAAGAGGATGGAGGTGTAAAATCTGAAACTGAGTTTATTTCTGGTAGAAATTTATGTGAT TATAGTAGTTTAGATACAAAGGCTGAAGTGAAAGATTATTTTTTAGGTTCTTCAATTGAAAAAAATGATGTAATGGCTGGTGGTAGTTTATCTCCTATGA TGTCTAATGAAGCCAATGAATTGGCTAATGAATCAAATCACCAAGAGAAACCTTCAGAAATATGTAATAATCCAAAAGACTCTACTGCTTCAGTTTTGGA ATGCTTAGATTCAGTTCAATCCGATGGATCCCCCCTTCCATCTGCAATTCCAGATGAAAATGAGAATTATATAGAGTGCCATTCCTCTCTGTCTGATTTT GTCAACAATGATGGTAAGATATCAGCTGTTCCACGCGCGGTGCGAAAGGCCAGAATGCTCAAGCATGGAGACATGACTTATGAGGGGGATGCTGATTGGG AGATTTTAATAAATGATCAATCTCTTCACGAAAGCCAAGTTGTTATAGATGATGACCACACTCTTAGAGCAAGGGCAAAGCTTGATTCCTCTTTTAATGT TGCCGATGACTCTGAAAGTGTTGCAGTAGTAGCTGTCTCAGCTGGACTCAAAGCCCATGCAGCTAGTCCAATTGAGAAAATAAAATTTAAGGAGATCTTG AAGCGTAAAGGTGGTCTCAGGGAATACTTGGATTGCAGAAATAAGATCTTAAGTATTTGGAGCAGAGATATTACACGCATTTTGCCTCTTGCTGAATGTG GAGTTAGTGATATCCATTCTGACAATGAAGGTCCTCGTTCTTTTCTTATCAGGGAAGTTTATGCATTTCTGGATCAATGTGGTTACATAAATGTTGGAAT CGCCTCTCAGAAGGAGACTCTTGGAAATAGTGCAAGTAATTGCTGTAAACTTGTGAAAGAAAAGGGTTTTGAGGAAAGTTCGACAGCTTCGGTGGCTGAC TCTGAAGATGGAGTTTCCTTTATTGTTGGTCAGACTAAAATGTCAGATACTTCCATGGAGATTAACAATGGTCTAACAGTGGATTACAAAGACCTGAGAA CAGAAGCTGCAGAAGACAGAAGGCCTTTCAATGCAGCAATGATGAGTATATCAAACGTGAGACAACATGAAGAAGGAAAATGTTATGACTACCAGGAAAA TGCTACAGGGCAAAGCAATGAATCCACCTGTGTTAAATCCACATTAGGTGATCAGATAGATGATCTTCTGCAGTCTGATTCAGAGGATAGAAAGAAAGTG ATTGTGATTGGAGCTGGTCCTGCTGGGCTAACTGCTGCTCGTCATTTGAAACGTCAGGGATTTCCTGTAACTGTACTTGAGGCTAGGAGTAGGATAGGAG GTCGTGTATTTACAGATCACTCATCCCTTTCTGTCCCTGTGGATCTCGGTGCTAGCATTATCACTGGTGTTGAGGCTGATGTGGCCACTGAGAGAAGACC AGATCCTTCCTCATTGGTTTGTGCTCAATTGGGCCTTGAGTTGACAGTGCTAAATAGTGATTGCCCTCTTTACGACACAGTGTCAGGACAAAAGGTTCCA CCAGATATGGATGAAGCACTGGAAGCTGAATACAATATTCTTCTTGATGACATGGAATTGCTCGTTGCTCAGAAAGGTGAACAAGCAATGAGGATGTCTC TTGAAGATGGTTTAGAATATGCCCTTAAGATTCGCCGTATGGCACGCTCTAGAAGTAGTGAAGAAACTGAAAAAGATAATTATGGTTATAGTCCGTTTGA TTCTAAAAGAGACTGTACTGTGAAGAAAAAAATTGACAAGGAGATTTTGAGTCCTCTGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTAT GGTTGTGCTGCTTTGCTTACAGAAGTTTCTCTTCCCTATTGGAATCAAGATGATGTGTATGGAGGATTTGGGGGAGCTCATTGTATGATTAAAGGGGGTT ACAGCACTGTTGTTGAGTCTTTAGGAGAAGGGCTTGCTGTCCACTTGAACCATGTCGTAACAAATGTGTCTTATGGCATCACAGAATCTGGCCAGAATAA TAAAGTCAAAGTTTCTACGTCAAATGGGAACGACTTCTTTGGAGATGCTGTCCTCATCACTGTTCCACTAGGCTGTTTGAAGGCTGAAACTATACAATTC TCCCCTCCCTTGCCGCCATGGAAATATTCTTCTGTTCAGCGTCTTGGCTTTGGAGTTCTCAATAAAGTGATCTTGGAATTTCCTTGCGTGTTTTGGGATG ATGCTGTGGATTACTTTGGAGCGACAGCTGAGGAAAGAGGCAAAAGAGGTCACTGCTTTATGTTCTGGAATGTCAGGAAAACAGTTGGGGCTCCTGTCCT TATAGCATTAGTGGTTGGTAAGGCAGCCATAGATGGTCAGAGTTTGAGCTCTACTGATCATGTCAACCATGCATTGAAAGTTCTACGTAAACTTTTTGGG GAGGCTTCAGTACCTGATCCTGTTGGACATGTTGTGACTGATTGGGGTAGGGATCCTTTTAGCTATGGTGCTTATTCGTATGTTGCTATTGGAGCATCAG GAGAAGACTATGATATATTAGGGAGACCAGTTGATAATCGCTTGTTTTTTGCTGGTGAAGCGACCTGCAAAGAGCATCCTGATACAGTCGGTGGTGCAAT GATGAGTGGACTACGGGAGGCCGTTCGCATAATTGACATATTGAGCACGGGAAATGATTACACTGCAGAAGTGGAGGCAATGGAAGCTGCCTTGAGACAG TCAGATACCGAAAATGAAGTTAGGGATATAACAAAGAGACTCAACACAATAGAGCTTTCTAACCTGTTCTACAAGAACTCTTTGGATGATGCTCAAATAT TAACCCGGGAAGCTTTACTAAGAGAAATGTTCCTTAATGCGAAAACCAATGCTGGGCGCTTGCATGTGGCCAAAGAATTGCTATGCCTTCCTGTTGGAAA CTTGAAGTCGTTTGCTGGGAGTAAAGAAGGGCTAGCTGTTCTCAACTCATGGATACTGATTTTGTGCTTCATAGTTCATATCTCGTCACAGGACTCAATG GGGAAGGATGGTACCCAACTCTTGCGGCACTGTGTGCGTCTTCTTGTGCGTGTTTCAACTGATCTACTTGCTGTACGCTTGTCAGGGATAGGGAAAACAG TGAAGGAAAAAGTTTGTGTGCATGCTAGCCGTGATATTCGAGCTATAGCAAGCCAGTTGGTTAATGTATGGCTTGAAGTTTTCCGCAAGGAAAAAAAAGC TTTTAATGGGGGATTGAAGTTGTCAAGACAAGCAATTGCCTTAGATCTATCAAAGAGAAAACATTTAAAAGATTCAGCCTCAGGAAAACCTCCTCTGAGT ACACATCCTGGTAGCCTTGATAATAGAGGAAAACAACAAGCAGCAATTGACTCAAGGCATGAGGTCAGCTCTTCCAGGTCCCAAGGTTCAATTAGCAAAG TACTCATCGAGAAGGAGGATAACTGCTATGTTATTTCTGAAGAAGAACGGGCTGCTATAGCTGCTGCAGAAGCTGCCCGTGCTCAAGCACATGCTGCTGC CGAGGCATATGCTGCTGCAGAAGCCAGGCGCAATAAGTTGTTACAGCTTCCAAAGATACCCTCATTCCAAAAATTCGCTTCAAAAAATGATGAGTGTGAT AATAGAAAAAAGTGGTCTGGTGCTTTGGGAAGGCAAGATTGTATTTCAGAGATTGATTCGAGGAATTGCAGAGTTCGGGATTGGTCTGTTGATTTTTCTG CTGCTTGTGTTAACCTTGATAATTCGAGAATGCCAGTTGATAACCTTTCACAGAGGAGTCACTCAAATGAGATTGCCAGCCATTTCAATTTCAGAGAGAA CTCAGGAGAAAGTGTTGCTGTGGACAGCAGTATATATACAAAAGCTTGGATTGACACAGCTGGTGGTGTGGGAATAAAAGATTCTGATGCCATAGACAGA TGGCAATCTCAAGCAGCTGCAGCCGATTCTTATTTTTCTAATCCAAGCATAAGTTTGAAGGATGAGGAGGATTCAAATGGGTGTTCAAGGTTACCCAGCT GGAAGCATGATGGTATGGCAAATGAGAGCTCAATTTCACAGGTTACTGTAAATAAGGAAGCCTTGAAAAGTCATCACTCCCGTGGAGCAGATCATATTAA ACAGGCTGTAGTGGATTATGTTGGATCACTACTTATGCCCCTTTATAAAGCAAGGAAACTAGACAAGGATGGCTACAAGGCTATAATGAAGAAAAGTGCA ACAAAGGTCATTGAGAAAGCCACAGATAAAGAAAAGGCCATGACTGTTGATGAGTTTCTAGATTTTAAGCGAAAGACTAAGATTCGCTCCTTTGTGGACA CATTGATTGAGAGACACATGGCAATAAAACCAGATATGAAATCCTAATGTTACTGGTTGGGAATAACCTGTACTTTTTGGACTTCTGTGTAATAGTTGCT TAAATCTGGTACTTCAGTTCTCACAGTTTTTGTGGCCATTGACATTTTTGCTGATGAGCACCTCAATCTACCAATGTAAATTATTCAGAAGGTGCCATTA AAGAAACAGATAAAACCTGATCAATCCAAATTGAATGGGCTCTATGTTAATTCTTCCTCCAGGCAACCTTGAACAGAATACTAAAACATTAATGGTGGAT TACCAGTGAACAGGCCTTACTACTTTTATAAACAGATCCAATGCAAATGTCAGTTGGATCTTCCGTGGTACTGGCATCAGCAGGCTGAGGAAGATTATGT CATTCACAGATGGGAGGTAATAGACTATCTTCCTGCCACAGTATGCATAATTAAAATCCAATATCTAGAAGGGGTGATTCCTGAGTACATTCTTGTCATC GTAAGCAAATTATTTTTCTCTCAATCATTAATGCTTATAAATTTACCTTCATGTTGGTCGCAGCTATTTTGATGCTTACCAAATTGTATTTTCTTGATTT ACTAGTACTAGTCCTAATTTTCAGATTAGCTATTTTGGATTGTGTGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_83109; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_255029
| Blastp | Lysine-specific histone demethylase 1 homolog 3 from Arabidopsis with 55.89% of identity |
|---|---|
| Blastx | Lysine-specific histone demethylase 1 homolog 3 from Arabidopsis with 56.58% of identity |
| Eggnog | amine oxidase(ENOG410XSNC) |
| Kegg | Link to kegg annotations (AT4G16310) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458077.1) |
| Pfam | SWIRM domain (PF04433.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |