Id Trinity | FTRINITY_DN59133_c1_g1_i9 |
---|---|
Name Transcript | Ll_transcript_255034 |
Sequence | ATTGTTCTGAACTTCTGATATTGCAAAATTTCATTGGTATCATTCTCCCTCCCTTCTCCTCCCCAAATTGCACTCCCTCGTTAGTCTTCACGGCGCAGTT ACAGAACACACGTTTTCCGTTGACGTGAGAAGCCGTTACTCGTTTTTGTTACCTTTGCGGGACTTCACTCTCTTAAAACGATTTCAGGAGAAGAAACTAC AGCATCTGAGAAAAACACAAACACAGAAGTTACGGAAAAATAAATTGGTGCTGGTTTGGAGTGAAATTGGGGTTAAATAATTATTTGAACATTCTGTTGG AAACCTACGGTTACACAGAGAAAAAATGGATGGAAAAGATAAGAGGATTAGGGCGAAGAAGAAGAGATCGAAGCCGGTGGAAATTGGTATTGATTTGGAT GATAATGAAACCATTGGCTCTATGTTTAAGCTAAAGAGGATGAAGAAGAAGGTTAATTTGGCGGCAGAGGGGTCTTGTGGTGATGGCGGTAAGAATGGTG AGGTTGTTGGGAAAGATTCAGTTGCTGCAGAAAAGGATTTCGGAGATATGGATGATACCTTGGCGAGTTTCAGGAAGAGGTTGAAGGAACTAAAGAGAGA TCGGAGATCTGAAGCCAGTGGAGGACGGAGTTCTGCTTTGAATGTAGGGCTGGAGTCTTCTGATAGATCTTTGAATGTTTCTGTTGAGGGAATTGAGGGT CACGGTTTGTCTGGTGATGATTTCGTTGCTCAGGAATCAAGGGGCACCTTAAATAATGAGAAAGGGGTATGTTTGTTGCTTGGTGATGGCGTGGAGCACT CTTATAATGAAAATATGGAAGACTCCTTGTCAGTGATTGTCCGAAAGGCACAATCTAATTTGATTAAGAAATCACGGGCCTCTTCAAGTTCAAAGAAAAA AAGAGGGATTGAGAATGTGGATAATGACCTGAGACCTGGCTCTGAAAGTGTTCCTGAAACTATAGATTCTATGGCTGAATTTATATCTAGACCTGCTTCT GCCTTGGTATCGGTGAGGAAAGATCTGACGTGTCCCGGTTCTGTGTCACAATCATCTACTCTGGGTCAATTTTCTTCCATGTCTGTAATTGATAGAGAAA AGCATGACTGTTTTCAAGAGGGTATTGCTGAGGGCATTTGCAATTCAAACATTCCAGGTGAACCATTAGTTGATCACTGTCTCTCAACTAATGTCTGCAA AGGGGATAGACAACTTTTAAATCGGTGTTCTTCCAGGTTAGATGGTGTTGAAATGATTGATTCCACACTTCTTTCAAAATTTGGGGAGGTGGTACATGAA CATACTGAGAGTGAGTTCAAGGATAGATCGACCGATGAGCTATCACAAATGTGTAATGATGCTTCAAAACATGGTGTTTCTATTTCTATTGAGAAAGAAA ATTCCCCACCTTATCATGACACTGAGCCCTTGATTAAATCGACTGAAAGTATATTGAGTGAGAATAATTTTACGGTTTCTGGAATCTTTTTTCAGGAATC ATCAGGCAATGAAGCTCTAAAGCTTTCTGAATCCCATGTGGAAGAGGATGGAGGTGTAAAATCTGAAACTGAGTTTATTTCTGGTAGAAATTTATGTGAT TATAGTAGTTTAGATACAAAGGCTGAAGTGAAAGATTATTTTTTAGGTTCTTCAATTGAAAAAAATGATGTAATGGCTGGTGGTAGTTTATCTCCTATGA TGTCTAATGAAGCCAATGAATTGGCTAATGAATCAAATCACCAAGAGAAACCTTCAGAAATATGTAATAATCCAAAAGACTCTACTGCTTCAGTTTTGGA ATGCTTAGATTCAGTTCAATCCGATGGATCCCCCCTTCCATCTGCAATTCCAGATGAAAATGAGAATTATATAGAGTGCCATTCCTCTCTGTCTGATTTT GTCAACAATGATGGTAAGATATCAGCTGTTCCACGCGCGGTGCGAAAGGCCAGAATGCTCAAGCATGGAGACATGACTTATGAGGGGGATGCTGATTGGG AGATTTTAATAAATGATCAATCTCTTCACGAAAGCCAAGTTGTTATAGATGATGACCACACTCTTAGAGCAAGGGCAAAGCTTGATTCCTCTTTTAATGT TGCCGATGACTCTGAAAGTGTTGCAGTAGTAGCTGTCTCAGCTGGACTCAAAGCCCATGCAGCTAGTCCAATTGAGAAAATAAAATTTAAGGAGATCTTG AAGCGTAAAGGTGGTCTCAGGGAATACTTGGATTGCAGAAATAAGATCTTAAGTATTTGGAGCAGAGATATTACACGCATTTTGCCTCTTGCTGAATGTG GAGTTAGTGATATCCATTCTGACAATGAAGGTCCTCGTTCTTTTCTTATCAGGGAAGTTTATGCATTTCTGGATCAATGTGGTTACATAAATGTTGGAAT CGCCTCTCAGAAGGAGACTCTTGGAAATAGTGCAAGTAATTGCTGTAAACTTGTGAAAGAAAAGGGTTTTGAGGAAAGTTCGACAGCTTCGGTGGCTGAC TCTGAAGATGGAGTTTCCTTTATTGTTGGTCAGACTAAAATGTCAGATACTTCCATGGAGATTAACAATGGTCTAACAGTGGATTACAAAGACCTGAGAA CAGAAGCTGCAGAAGACAGAAGGCCTTTCAATGCAGCAATGATGAGTATATCAAACGTGAGACAACATGAAGAAGGAAAATGTTATGACTACCAGGAAAA TGCTACAGGGCAAAGCAATGAATCCACCTGTGTTAAATCCACATTAGGTGATCAGATAGATGATCTTCTGCAGTCTGATTCAGAGGATAGAAAGAAAGTG ATTGTGATTGGAGCTGGTCCTGCTGGGCTAACTGCTGCTCGTCATTTGAAACGTCAGGGATTTCCTGTAACTGTACTTGAGGCTAGGAGTAGGATAGGAG GTCGTGTATTTACAGATCACTCATCCCTTTCTGTCCCTGTGGATCTCGGTGCTAGCATTATCACTGGTGTTGAGGCTGATGTGGCCACTGAGAGAAGACC AGATCCTTCCTCATTGGTTTGTGCTCAATTGGGCCTTGAGTTGACAGTGCTAAATAGTGATTGCCCTCTTTACGACACAGTGTCAGGACAAAAGGTTCCA CCAGATATGGATGAAGCACTGGAAGCTGAATACAATATTCTTCTTGATGACATGGAATTGCTCGTTGCTCAGAAAGGTGAACAAGCAATGAGGATGTCTC TTGAAGATGGTTTAGAATATGCCCTTAAGATTCGCCGTATGGCACGCTCTAGAAGTAGTGAAGAAACTGAAAAAGATAATTATGGTTATAGTCCGTTTGA TTCTAAAAGAGACTGTACTGTGAAGAAAAAAATTGACAAGGAGATTTTGAGTCCTCTGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTAT GGTTGTGCTGCTTTGCTTACAGAAGTTTCTCTTCCCTATTGGAATCAAGATGATGTGTATGGAGGATTTGGGGGAGCTCATTGTATGATTAAAGGGGGTT ACAGCACTGTTGTTGAGTCTTTAGGAGAAGGGCTTGCTGTCCACTTGAACCATGTCGTAACAAATGTGTCTTATGGCATCACAGAATCTGGCCAGAATAA TAAAGTCAAAGTTTCTACGTCAAATGGGAACGACTTCTTTGGAGATGCTGTCCTCATCACTGTTCCACTAGGCTGTTTGAAGGCTGAAACTATACAATTC TCCCCTCCCTTGCCGCCATGGAAATATTCTTCTGTTCAGCGTCTTGGCTTTGGAGTTCTCAATAAAGTGATCTTGGAATTTCCTTGCGTGTTTTGGGATG ATGCTGTGGATTACTTTGGAGCGACAGCTGAGGAAAGAGGCAAAAGAGGTCACTGCTTTATGTTCTGGAATGTCAGGAAAACAGTTGGGGCTCCTGTCCT TATAGCATTAGTGGTTGGTAAGGCAGCCATAGATGGTCAGAGTTTGAGCTCTACTGATCATGTCAACCATGCATTGAAAGTTCTACGTAAACTTTTTGGG GAGGCTTCAGTACCTGATCCTGTTGGACATGTTGTGACTGATTGGGGTAGGGATCCTTTTAGCTATGGTGCTTATTCGTATGTTGCTATTGGAGCATCAG GAGAAGACTATGATATATTAGGGAGACCAGTTGATAATCGCTTGTTTTTTGCTGGTGAAGCGACCTGCAAAGAGCATCCTGATACAGTCGGTGGTGCAAT GATGAGTGGACTACGGGAGGCCGTTCGCATAATTGACATATTGAGCACGGGAAATGATTACACTGCAGAAGTGGAGGCAATGGAAGCTGCCTTGAGACAG TCAGATACCGAAAATGAAGTTAGGGATATAACAAAGAGACTCAACACAATAGAGCTTTCTAACCTGTTCTACAAGAACTCTTTGGATGATGCTCAAATAT TAACCCGGGAAGCTTTACTAAGAGAAATGTTCCTTAATGCGAAAACCAATGCTGGGCGCTTGCATGTGGCCAAAGAATTGCTATGCCTTCCTGTTGGAAA CTTGAAGTCGTTTGCTGGGAGTAAAGAAGGGCTAGCTGTTCTCAACTCATGGATACTGGACTCAATGGGGAAGGATGGTACCCAACTCTTGCGGCACTGT GTGCGTCTTCTTGTGCGTGTTTCAACTGATCTACTTGCTGTACGCTTGTCAGGGATAGGGAAAACAGTGAAGGAAAAAGTTTGCGTTCATACCAGCCGCG ACATTCGTGCTATAGCAAGCCAGTTGGTAAATATATGGCTTGAAGTATTCCGCAAGGAGAAAAAAGCATCTAATGGGGGATTGAAGTTGACAAGACAAGC AACTGCTGTAGATTTACTGAAGAGAAAATATTTAAAAGATTCAGCCTCAGGAAAGCCACCCCTGAGTACACATCATGGTAGTTTTGAGAATAAAGGAACA CAACAAGCAACAAGGCATGAGGCCATTTCTTCCAGGTCCCAAGGTTCAATTGGCAAAGTACTCACTGAGAAGGAGGATAACTGCTATGTTATTTCTGAAG AAGAACGGGCTGCTATAGCTGCTGCAGAAGCTGCCCGTGCTAAAGCTCATGCTGCTGCTGAGGCATATGCTGCTGCAGAAGCCAGGCGCAATAAGTTGTT ACAGCTTCCTAAGATACCCTCATTCCAGAAATTTGCTTCAAAAAATGATGAATGTGATAGCAGAAAAAAGTGGTCTGGTGCTTTGGGAAGGCAAGATTGT ATTTCAGAGATTGATTCGAGGAATTGTAGAGTTAGGGACTGGTCTGTTGATTTTTCTGCTGCTTGTGTTAACCTTGACAATTGTAGAATGCCAGTTGATA ACCTTTCACAGAGGAGTCACTCAAATGAGATTGCCAGCCATTTGAGTTTCAGAGAGCACTCGGGAGAAAGTGTCGCTGTGGACAGCAGTATATATACAAA AGCTTGGATTGACACAGATAATGGTGTGGGAATAAAAGATTCTGATGCCATAGACAGATGGCAATCTCAAGCAGCTGCAGCTGATTCTTATTTTTCAAAT CCAAGCATAAATTTGAAGGATGAGGAAGATTCAAATGCCTGTTCAAGGTTACCCATCTGGAAGCATGATGGTATGGCAAATGAGAGTTCTATTTCACAGG TTACTGTAAATAAGGAAGCCTTGAAAAGTCATTCCCGTGGAACAGATCATATCAAACAGGCTGTTGTGGATTATGTTGGCTCACTACTTATGCCCCTTTA CAAAGCAAGGAAACTAGACAAGGATGGCTACAAGGCTATAATGAAGAAAAGTGCAACTAAGGTCATGGAGAAAGCCACGGATAAAGAAAAAGCTATGACT GTTGACGAGTTTCTAGATTTTAAGCGAAAGACTAAGATTCGCTCCTTTGTGGACACATTGATTGAGAGACACATGGCAATGAAACCAGATATGAAATCTT AATGTTCCTTGTAGGGAATAGCCTGTACTTTTTGTACTGCTGCGAAGCAGTTGCTGAAGTCCGGTTCTTAATTTTTGACAGCTGTGGTCATTGACATTCT TTCTGATGAGCACCTTAGTCTGCCAATGTAAATGATCAAGAGGGGTGCCGTTGAAACAGATGAAACATCATCAATCTAGATTTGTGTGGTCACTTTGGTT CAATGCAAATATCAGTTGGATCATTGGCAGGTTTGAAGATGACAGCAGATTGCAATCATCCATTGTTCCATTTTCTATCTTATGTCTAGGTTTATATCCG AGGGTGGAAAATTTAGATCCTGTTTTGATTAAAGGGGTTTCCAACGGACAAGTCTTCAATTTGACCTTACCAATCTGTACAGCTTAGGATTGTTTAGTGA TGACAAGCATGCATACCGTTTTTGGGGAATTTCAATTAGTAACTTCAATTTCATTTTCCTAAGTGGGGAATTAGCTATGCCTCCAATTTCATCAGGTTTC TGTATCTTTTTTTTGGTGTGCTTGTGTATGCACCTTGTGTATCTATAGTGTAATGACCTTCCAATTGTGTTCCAAAAGAAATTAACTACAAACATCTATC CTCACCAAATAAGCCCTTCATCTAGCTACACTTATGATTCAATGGATTACAACATCGGGATTTGGACATCTTCTGAACTGTGTATAATCCAAAAGCCACT TCTATATTGGCTGTTCTCTTTTGCTAATTATTGCTTAAACCTTTTTCTCTTGTTTGCTAGGCTGAGAAAGATTATTACGTCAGTCACAGATGGGAGGTAA TAGGTATTTGGTTGGTTGTGCCCAGTGACTTAAATTGCGGCCGCAACGCGGTGACTGCCGCAACCGTATCACACTGCAATTGCAATGTGATTCCGAATCA CAATGATGCAGCCCATACATGATGTCTTCTGTTTTCTGAATTTTTTGTCCCTTCATTTTGATGCTCTCATTGGTGGAGCTTGATGCCCCTATTATGGTTC TATTGTATTTGTTTCTGCTGCGGACTCTTACTCCAGCAGTATGTATTATTGGATAATGTAAAATATTGCTGCCACGTAAATTAAAATCCAATACCTACAA GGGTTGAGCACATTCATTTCATCATTTTGATGTCCGGCAATATCATCGAATAAAAAACAGTAACATTACATGCCTGAATGCTGAATGGTATGATACAACA TTATTTTTGGAATTGCCTTATGTTCATATTTGTGCTCCTGGTTATCTGAATCTCAAGTGGCATTATTCCAACTAGCGTGTCGACAGACACGGATGTCAGC CGACTCGTGTTCTTATTTTTTGGAGAATTATAT BLAST |
Tissue | flowers |
Gene name | LI_gene_83109; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_255034
Blastp | Lysine-specific histone demethylase 1 homolog 3 from Arabidopsis with 56.25% of identity |
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Blastx | Lysine-specific histone demethylase 1 homolog 3 from Arabidopsis with 56.96% of identity |
Eggnog | amine oxidase(ENOG410XSNC) |
Kegg | Link to kegg annotations (AT4G16310) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458077.1) |
Pfam | SWIRM domain (PF04433.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |