Ll_transcript_256401

• Id Trinity: FTRINITY_DN59134_c5_g2_i1
• Name Transcript: Ll_transcript_256401
• Sequence: AACCTTGAGGACAAGGTTGTCTTTAATGGGGGAAGTAATGTAACAGACCAGGATAATGAGCACTCCCAAAAGAAGAATAAGACAAAGTTTGTTAGAGCAA ATGGACATGTGGCAACCAGGCACAACTCACATAAAAAACAACCAAATTCTCTATTGCAGGATTTTGTGTAAAGGCAGTGAAAAGAATAGAATTTAAGCAG CCAGTGAGAGAGAATTGGGTGTGGATGATGTAACAATTTTCCTTGCAACTCTTATGTCCTTTCTCCCCTCCCTTCTACTCTGACATTCTCTTCTCATCTT TTCTTATTCTCTAAAATTCTATATCAATTTCCAATTTCATTACTGCAAGAATGTTTCTCTATTGATGGATCTAGTGGTGTGTACTAGAAGCCTTATTACT AAATAAAGTGCAGAATTCTCATTAGTTGTTGTGACTCTTTTTTTCATTTTATTCTTCCTCTGTGTTTACAACTTGCTGATTGTTAGTATTGTTACATTGG TGCTTTCATTCACCTTTAACAATGGCAGATAACACTCGTATGAAGGAGATGAGTACAGATATTCGAGACCTGAAACAAATTGTTAGTCTCTTAGAAAAAT TGGATCAAGACAACAGTATTCGTTTGCAAAAGATGGAAGCTACAATGGATGAGCTCAAGGAGCTGATCAAACATCACAGCACAGGAACCTCTAACACTCC ATCAGAATCTAAAAAATGGCATAAACCACCATTTCAAGTAAGGAACGTAGAAGTTGAATTTCCTAGATTTGATGGTAATGAGGTATTACGATGGATATTT AAGGCAGAACAATTTTTTGATTTCTATGATACCCCTGATGAACATAGAATCACCATTGTTGCCATTCATTTAGAAAAGGAAGTGGTTCCTTGGTTCCAAA TGATTACTCGTACTCAACCTTTTCAAACTTGGAAATCATTCACCAAGGCTTTAGAATTGGAGTTTGGCCCATCCCCTTATGATTGTCCTAGATCTACTCT ATTCAAATTAACACAACAACAATTTGTTAATGACTATTATCTAGAATTCATGGCCCTGGCAAACAGAGTTTATGGGGTGAGCACAAATGCTATGTTATAT TGTTTTATCAGTGGACTTAAACCTGATATCAAAAGAGATGTGGTAGCTCAAAGTCCTTTGACATTGCTGAAAGCAGTAGCTCTAGCTAAATTGTTTGAGG AAAAATACAATCAAAAACCAAAACACATTTACAAACCATACCCACCATACACTAACCCCCATACCCAAAAATTCACAACTCTCAACCACCACTTCTACCA ACACCTCATTCTTCTTCTTCACACACTGCCAATAATCCAATCAAAAAAATGACCCAAACAGAAATGCAAATCCGTAGAGAAAAAGGCCTATGCTACACTT GTGATGAAAAATTCACTCCCAAACATAGATGTCCTAATAGGCATTTCATGATTTTACAAACAGATGATGAACTTGTACTAGTGGAGCCTATGGATGGGAT ACCATCAATTGAAACCTCAGAAATTCACACAGGTCACTTATCCTTTAATGCACTAAAGGGCATAAGTGGATTAGGGACCTTAAGGTTTCAAGGCAAGATC AATGGTTATCCTGTAAAGATACTCTTGGACAGCGGGAGTTCAGACAATTTTCTGCAGCCACGAATTGCACAGTTTCTGGGAGCAGCTTGGTTAGCTACAC TTGGCCCTATGTTGTTGATTATAGCTCCTTAGTTTTCAAATTATTGCTGAATGGTCAATTCATTACCATCCAGGGAGATACACCACAATTACCACAAGCC TCACAATTTCATCACATTAAAAGAATGCACCACACTGATGCAATTGCTGAGTTGTTTGCCGTGCAAGTTCAAGAACACAATGTTGGCCAAGATGATTTTT CTGCCATCGCTCAGAACATGGCACTAGAGTTAGCCATATTGCTTCATACTTACAGTGAGGTTTTTAACAAACCTATTGGACTACCTCCTCAGCGATCTCA GGATCATGCCATACCTTTGTTGGATGGTAGCAACCCTGTCAAGGTTAAGCCTTATCGATATGCGCATAGCCAAAAATCTGAGATTGAAAAAATGGTGCAC AACATGTTACAAGAAGGCATCATCCAGCCTAGCACGAGTCCATTCTCATCACCTATCCTTTTGGTAAAAAAGAAAGATGGTTCCTGGAGGTTTTGCACAG ACTATAGAGCATTAAATGCCATTACTATTAAGGATAGCTTTCCAATGCCAACTGTGGATGAATTATTGGATGAACTATTTGGTGCTCAATTCTTCTCTAA ATTGGACTTGCGGTCTGGTTACCATCAAATACTGGTCAAACCAGAAGATAGACACAAAACTGCATTTCGAACTCATCAAGGACATTATGAGTGGTTGGTC ATGCCATTTGGACTGACTAATGCTCCAGCTACATTTCAACAATTAATGAATCAAGTGTTTCAAAGATTACCAAGGAAGTGTGTCTTGGTATTTTTTTATG ACATCTTGGTGTATAGTCCAAGTTGGTCTTCACATTTGCATGATCTAGAAGTTGTTTTGCAAACATTGCAGGCCAATGTTTTGTATGCCAAACTATCCAA ATGCACTTTTGGCACACAACAGGTTGATTACTTGGGGCACACAGTTTCTAATCAAGGTGTGGCTATGGATAAGATTAAAGTGCAAGATATCTTGAAGTGG CCAGCACCTAAAAACATCAAGCAATTCAGAGGATTTTTAGGTCTCACAGGCTATTACAGGAAGTTTATCCAAAATTATACATCTGTAGCAAATCCATTGA CTAATTTGCTAAAGAAAGATGCTTTTGCATGGTCACCAGAAGCACAAACTGCCTTCATTGTATTAAAACAATTGGTTACTACTGCACCAGTGCTAGCGCT GCCCAACTTTCAACAGCCATTCACATTAGAAACAGATGCATCAGGGACTGGTGTGGGGGCAGTTTTGAGCCAAAACAAGCATCCTATTGCTTATTTTTCC AAGAAGTTGAATCCAGAATGCAGAAACAGTCAGCATATTGTAGAGAGTTGTATGCCATTACAGAAGCTTTGGCCAAATTCAGACACTATCTATTAGGCCA TCACTTTATTATCAAGACCGATCAGAAAAGTTTGAGACATTTGAATGATCAAACTATTCAAACTCCAGAACAACAGAATTGGCTGCACAAATTTCTGGGG TATGATTTCAAAATTGAATATAAACCAGGCAAAGATAACATCCCTGCTGATTCCCTTTCAAGATCTTGTAACACGGCTTGGTCATCCCCGACACCAACAT TTTTACAAGAGTTGAAAGATGCCTTACAAGCAGATGAACATTGGAAACAACAATTAGAAACATGTGAGGCCAATCAACAACTTAATAAGTTTTTCACTCA TAAGGACAAATTACTTTATTGGAAAGGCAGGTTGGTAGTCCCTTCCACAGCAGTGCTCATCCAACAAATATTAAAGGAGTATCATAGTTCTCCCATTGGT GGTCACTCAGGAATTGCTAGAACAACGTCTAGAGTCAAATCTGAATTCTATTGGCCTAATATGAAACAAGACATTCAACAATTTGTACAGAATTGCATCA TTTGCCAACAAGCTAAACACCTGCACTCACATCCTAGTGGGCTGTTACAACCATTGCCAATTCCTAATCAGATTTGGGAAGATATTGCAATGTAGTTTAT AACAGGCTATACAGTGATTTTTGTGGTGATAGACCGATTGTCTAAGTATGCTCATTTCCATCCGTTAAAAACTGATTATACAAGCATGCAAGTTGCTGAA ATCTTCATGGCTTCTATAGTTAAGTTACATGGTATGCCAAAATCTATTTTGAGTGATAGAGATAAAGTGTTCACTAGTAAATTCTGGCAACATTTGTTCA AGATGCAAGGCACAACATTGGCAATGAGCTCAGCATATCATCCACAGACTGATGGCCAAACTGAGGTGCTTAACAAATGCTTGGAAATGTACTTGAGATG ATTCACCTTTCAAGCTCCAAAGACATAGGTTACTGCATTACCATGGACTGAATATTGATACAATACATCTTACCATAATAGCTTGAAAATGACACCATTT CAGGTAGTTTATGGACGAGAACCGCCTACCTTAACTAGATACAACTTCAATAGCTCGGATAGCTCAAGTATCCAGAATACTCTGCAAGAACGGGATATGC TATTAACTCAATTAAAGAATAATCTGCACCGAGCTCAGCAACATATGAAAACTCAGGCTGATAAACAAAGGCTTGACATGCATTTTAGTGTTGGACAGAA GGTTTGGGTGAAGCTCCAACCTTACAGACAACACTCAGTGAGCCTTAGGAAGAATCATAAACTTGGCATGAAGTATTTTGGTCCCTTCACCATCTTAGAA ATGATTGGTTCAGTTGCATACAAATTACATCTTCCTGATAATGCACGATTTCATTCTGTTTTTCATGTGTCACAATTGAAAGCTTTTAAAGGAGATGAAA CAATTCCACACATTCCTCTGCCTTTACTCATTGACACTAAAGGTCCAAAGTTACAACTTGTCCATGTTCTGAACCAAAGAACTATTCTGAAAGGAGGCCA CCGTGTGTTGCAAGTGCTAATTCAATGGGAAGGACAAGATCATTCTAAAGCAACTTGGGAAGATTTTGATACAATTGTTAACCATTATCCTACATTCAAC CTTGAGGACAAGGTTGTCTTTAATGGGGGAAGTAATGTAACAGACCAGGATAATGAGCACTCCCAAAAGAAGAATAAGACAAAGTTTGTTAGAGCAAATG GACATGTGGCAACCAGGCACAACTCACATAAAAAACAACCAAATTCTCTATTGCAGGATTTTGTGTAAAGGCAGTGAAAAGAATAGAATTTAAGC
• Tissue: flowers
• Gene name: LI_gene_83120;
• Additional information: details;

Expression of Ll_transcript_256401

FPKM

• FPAB: 3.2
• FPNAB: 2.1
• LF1: 2.2
• LF2: 1.7
• LF3: 1.9
• LF4: 1.1
• UF1: 1.1
• UF2: 1.6
• UF3: 1.5
• UF4: 0.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_256401

• Blastp: Retrovirus-related Pol polyprotein from transposon 17.6 from Sophophora with 44.95% of identity
• Blastx: Transposon Tf2-6 polyprotein from Schizosaccharomyces with 31.22% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_015969943.1)
• Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) (PF00078.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;