| Id Trinity | FTRINITY_DN59142_c2_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_256742 |
| Sequence | CCTTTTCATCACTCTCACTCCAGATAATAATTTTTCATCTGGTTACATGAAAAGAATCAGAGAAACCATGGATGAAGTGACAATTGAAACAAATACCTGT GATCAGTTGCAGAAGCAGGAACTTTCTCCTCACGCTCTTCCATTTGCTAGAAGCTATCAACTTGAAGCATTGGAAAAAGCTATAAAGGAAAACACCATAG TTTTTTTGGAGACTGGTTCAGGAAAGACTTTGATAGCCATCATGCTTCTTCGCAGTTACGCGTATCTACTGCGAAAGCCTTCTCCTTACATTGCTGTGTT TTTGGTTCCCAAAGTTGTGCTGGTATCTCAACAAGCTGAATCTGTGAAAGCTCTCACCGATTTAAAAGTCGGAATGTATTGGGGTGAAATGGGAGTTGAT TACTGGGATGCTGGTACCTGGAAAAAAGAAATCGAGAAATATGAGGTTCTGGTTATGACTCCGGCAATATTGCTTAGGAGCTTGAGGCATAGCTTTCTCA AATTGAACATGATAAAGGTTCTAATAATGGACGAATGCCATCATGCTAGGGGAAGAGATCCTTACGCTTGCATCATGAGGGAGTTTTATCATGACCAACT ACAATCTGGTACCTCTGATCTACCTCGGATTTTCGGGATGACTGCGTCTCCAATTAAGTCAAAAGTTGGAAATTCTGAATGGACCTTGGCAGAAAATATT CGCAAACTAATGACTCTAATGAATTCAAAGGTATATACTTGTTCAAGTGACGCTATTGCAGAGTTCATTCCACTATCAACCCCAAAATTCAAGTTTTACA GGGAAGATGTAATTCCACCTATGGTAGTTGAAGAGTTAGCTGGTAAGCTCAAGATGTTGAAAGAACAGCATGAAGAAGCCCTCGTAAATTCAGATTTCAC ACAATCCGCTATAGATTCTGCACAGAAGAGAATGGAAAAGATTTTGTTCGCTTTAATGTTTTGCTTGGATGAGCTTGGTATTTGGTTGGCTTTGAAGGCT GCAGAGTCCTTATCTTCCAATGAATCTGAATCAATTTCACGTAGTAACTCCGGGGATAGATTTGTTAAAAGTTTCAGTCTCGCTACCGTTCATCATCTTA CAACTTACTTACCGTCTGGTCCCGAGTGGTCTTTTGGTGATAATATTAAATCTGATATGGATATAGGGCTGTTAACCTCCAAAGTTTACTGCCTTGTCGA ATCTCTGCTCGAGTACAGGGATTTGAATAATATGAGATGTATAGTTTTTGTTGAGAGGGTCATTAGTGCAGTTGTTCTTGAGATTCTTTTGAATGCCTTG CTTCCAAAATATAATAGCTGGAAGGCTAAATTCATAGCAGGACACAATTCTGGATTGAAAAATCAAACTAGGAATAAGCAAAATGAAATTGTAGAAGAGT TTCGTGATGGATTGGTCAACATTATTGTTGCAACATCGATTCTTGAAGAGGGTTTAGATGTCCAAAGTTGCAATTTGGTTATTAGATTTGACCCGTGTCC CACAGTATGCAGTTTCATACAGTCCCGAGGTCGTGCCAGAATGCAAAATTCAGATTACGTATTAATGGTTAAGAGTGGGGATTCAGTTACGCATTCAAGA CTAGAGAAATACCTTGCGAGTGGGGATATCATGAGGAAGGAGTCCCTGCGTCAATCTTCAATTCCTTGTGGTTCACTTGAACAACTTCCGGAGGAAGTTT ATCGTGTTGAAAGCACTGGAGCCATTGTTAATCTTAGTTCTAGCATTACTTTGATATACTTGTATTGCTCATGGCTCCCTTCAGACGGGTACTTTAAACC GTCTCCAAGATGGGACAAAGAGACCGGAACACTGTATCTTCCCAAGAGCTGCCCTCTACAGCCTATTCAGGTACAAGGTGTCAAAAAGTTCTTAAAGAAT ATTGCATGTCTCGAAGCATGCAAGCAACTTCATAATATCGGAGCTTTGACTGATAATCTGGTTCCTGATATTGTCGTGGAAGAAGCAGAGGTGGATGAAT TTGAGAATGAGCCTTACAATGAGGAGCAACCATGTTATGTACCGACTCAATTGATCAACCACCTCTCGAAGGATGATAAGACAATGTATCACTGTTATTT AATTGAATTGAAGCAAAATTTTAGCTATGACATCTCTGTGCGTGACATTGTGCTTGCAACAAGAAGTGAGCTTGATCCAGAAACTGAAAGCACGCAATTT GAAATGTGCTTTGACCGGGGTAGTCTGTCGATAAACTTAAGACGCATCGGAGCTGTTCATCTTTCCCCAAATGAGGTTCTTTTGTGTAAAACATTCCAAG TCACTATTCTCAAGATTCTTGTAGATCACAATATTGATAAGTTGGCAGCTAGTTTAAAATCTTTTGATAAACTCTATTTGGACGATGATCTGGAGATCGA TTATCTTCTGCTACCGGCCACTGCCATACAACATAGACCTGCCGTAATTGATTGGGTGTCCATTACCTCTGTCAATCCATCTAAAATTATATGCGATAAG CATTCTCCAAAAGTATGGACGAAAAATGGTCTAGTTTGCCCTTGCATACTACAAAACTCTTTGGTTTATACTCCTCATAATGGTCGAATTTATATCACCA CTAGTATAATGGAATTGGATGGGAACTCACCTCTGGAACTAAGGGATGGTGGAGTTACGACGTACAAGAAATACTATGAAGAAAAGCATGGCACTCGATT GCATTTCGAATACCAACAGCTGCTTCATGCAAGGCGCATTTTTGTCGTTAAGAATTACTCTCATGGACGCAGACAAGAGAAGGATAGAGCAGGCAAGAAC TATGTTGAACTACCTCCTGAATTGTGCTGTATAATCATGTCACCAATATCAATTAGTACGCTTTATTCCTTCTCATTTGTTCCATCAATCATGCATCGAC TTGAGTCATTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_83180; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_256742
| Blastp | Endoribonuclease Dicer homolog 2 from Arabidopsis with 53.76% of identity |
|---|---|
| Blastx | Endoribonuclease Dicer homolog 2 from Arabidopsis with 53.76% of identity |
| Eggnog | Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)(COG0571) |
| Kegg | Link to kegg annotations (AT3G03300) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419124.1) |
| Pfam | Type III restriction enzyme, res subunit (PF04851.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |