Ll_transcript_256743

Id TrinityFTRINITY_DN59142_c2_g1_i13
Name TranscriptLl_transcript_256743
SequenceGTGACTCTTTTGAACAGCTCCCGGAGGAAGTGTATCGTGTTGAAAGCACTGGAGCCATTGTTAATCTTAGCTCTAGCATTACTTTGATATACTTGTATTG CTCATGGCTCCCTTCAGATGGGTACTTTAAACCATCTCCAAGATGGGACAAAGAGAATGGAACACTGTATCTTCCAAAGAGCTGTCCTCTGCAGCCGATT CAAGTAGAAGGTGAAAAGAAATTGTTAAAGAATATCGCATGCCTTGAAGCATGCAAACAGCTTCATAAGATTGGAGCTTTGACTGATAATCTTGTTCCCG ATATTGTCGTGGAAGAAGCAGAGGTGGATGAATTTGAGAATGAACCTTACAATGAGGAGCAACCACGATATGTACCACATCAATTGGTCAATCACATCTC CAAAAATGATAAGACAATGTACCACTGTTATTTAATTGAGTTGAAGCAAAATTTTAGCTATGACATATCTGTGTGTGACATTGTGCTTGCGACGAGAAAT GAGCTCGATCCAGAAATTGTAAGCACACAATTTCAAATGTGCTTTGACAGGGGTAGCATGTCAGTAAACATGAGATACATCGGCACACTAAATATTTCCC CGAATGAGGTTCTTTTGTGTAAAACATTCCAAGTCACTATCCTCAAGATCCTTGTAGAACATAATATGGATAAGTTGGCAGCTAGTCTAGAATCATTAGA TAAATTCTCCTTGGATGATGATCTCGAGATTGATTATCTTCTGCTTCCATCCACTGCCGTAAAAAACGGACCTGCTGTAATTGATTGGCTATCCATTACC TCTGTCAATCCATCTAAAATTACATGTGAGAAGCATTCTCCAAAAGTATGGACGATAAACGGTCTAGTGTGCCCTTGCATACTACAAGAATCTTTGGTTT ATACTCCTCATAATGGTCATGTATATATCACCACAAGTGTAATGGAATTGGATGGGAACTCACCTCTGGAACTAAGGGATGGTGGAGTTACTACCTACAA GAAATACTATGAAGAAAAGCATGGCACTCGATTGCATTTCGAATACCAACAGCTGCTTCATGCAAGGCGCATTTTTGTCGTTAAGAATTACTCTCATGGA CGCAGACAAGAGAAGGATAGAGAAGCAGGAAATAAATTTGTTG BLAST
Tissueflowers
Gene nameLI_gene_83180; 
Additional informationdetails; 

Expression of Ll_transcript_256743

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_256743

BlastpEndoribonuclease Dicer homolog 2 from Arabidopsis with 44.19% of identity
BlastxEndoribonuclease Dicer homolog 2 from Arabidopsis with 44.19% of identity
EggnogDigests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)(COG0571)
KeggLink to kegg annotations (AT3G03300)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419125.1)
PfamDicer dimerisation domain (PF03368.13)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;