Id Trinity | FTRINITY_DN59142_c2_g1_i13 |
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Name Transcript | Ll_transcript_256743 |
Sequence | GTGACTCTTTTGAACAGCTCCCGGAGGAAGTGTATCGTGTTGAAAGCACTGGAGCCATTGTTAATCTTAGCTCTAGCATTACTTTGATATACTTGTATTG CTCATGGCTCCCTTCAGATGGGTACTTTAAACCATCTCCAAGATGGGACAAAGAGAATGGAACACTGTATCTTCCAAAGAGCTGTCCTCTGCAGCCGATT CAAGTAGAAGGTGAAAAGAAATTGTTAAAGAATATCGCATGCCTTGAAGCATGCAAACAGCTTCATAAGATTGGAGCTTTGACTGATAATCTTGTTCCCG ATATTGTCGTGGAAGAAGCAGAGGTGGATGAATTTGAGAATGAACCTTACAATGAGGAGCAACCACGATATGTACCACATCAATTGGTCAATCACATCTC CAAAAATGATAAGACAATGTACCACTGTTATTTAATTGAGTTGAAGCAAAATTTTAGCTATGACATATCTGTGTGTGACATTGTGCTTGCGACGAGAAAT GAGCTCGATCCAGAAATTGTAAGCACACAATTTCAAATGTGCTTTGACAGGGGTAGCATGTCAGTAAACATGAGATACATCGGCACACTAAATATTTCCC CGAATGAGGTTCTTTTGTGTAAAACATTCCAAGTCACTATCCTCAAGATCCTTGTAGAACATAATATGGATAAGTTGGCAGCTAGTCTAGAATCATTAGA TAAATTCTCCTTGGATGATGATCTCGAGATTGATTATCTTCTGCTTCCATCCACTGCCGTAAAAAACGGACCTGCTGTAATTGATTGGCTATCCATTACC TCTGTCAATCCATCTAAAATTACATGTGAGAAGCATTCTCCAAAAGTATGGACGATAAACGGTCTAGTGTGCCCTTGCATACTACAAGAATCTTTGGTTT ATACTCCTCATAATGGTCATGTATATATCACCACAAGTGTAATGGAATTGGATGGGAACTCACCTCTGGAACTAAGGGATGGTGGAGTTACTACCTACAA GAAATACTATGAAGAAAAGCATGGCACTCGATTGCATTTCGAATACCAACAGCTGCTTCATGCAAGGCGCATTTTTGTCGTTAAGAATTACTCTCATGGA CGCAGACAAGAGAAGGATAGAGAAGCAGGAAATAAATTTGTTG BLAST |
Tissue | flowers |
Gene name | LI_gene_83180; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_256743
Blastp | Endoribonuclease Dicer homolog 2 from Arabidopsis with 44.19% of identity |
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Blastx | Endoribonuclease Dicer homolog 2 from Arabidopsis with 44.19% of identity |
Eggnog | Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)(COG0571) |
Kegg | Link to kegg annotations (AT3G03300) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419125.1) |
Pfam | Dicer dimerisation domain (PF03368.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |