| Id Trinity | FTRINITY_DN59142_c2_g1_i15 |
|---|---|
| Name Transcript | Ll_transcript_256745 |
| Sequence | CAACTTTTCTACCAACAATCCACAACTCTTAACTATATGAATATTGAAAAATAAGCCAAGAAAGCATGGAAGAAATGACAATGGCAATAGATAACTGTAG CCAGCAGAAGCAGCTTTCTCATCATGCTCTTCCATTTGCAAGAAGCTATCAGGTTGAAGCATTGGAGAAAGCTATGAAGGAAAACACCATTGTGTTCTTA GAGACTGGTGCAGGCAAGACTTTGATAGCCATAATGCTTCTCCGAAGCTATGCTTATCTTCTGCGAAAGCCTTCGCCTTACATTGCAGTTTTCTTGGTTC CGAAAGTTGTGTTGGTATCTCAACAAGCTGAAGCGGTGAAAGTGCTCACTGATTTAAAAGTGGGAATGTATTGGGGAGAAATGGGAGTTGATTACTGGGA TGCTTCCACCTGGAACAAAGAATTTGAGAAACATGAGGTTCTGGTTATGACCCCCGCAATATTGCTTAGGAGCTTGAGGCATAGCTTTCTCAAACTTAAC ATGATAAAGGTTCTAATAATGGACGAATGCCATCATGCTAGGGGTAGAGACCCTTATGCTTGTATCATGAGAGAGTTTTATCATGACCAATTAAAATCTG GTGTCTCTGATCTACCTCGGATATTCGGGATGACTGCATCTCCAATTAAGACAAATGTTGGGAATTCTGAATGGACCTTGGCAGAAAGTATTCACAAACT AATGACTCTAATGCATTCAAAGGTATATACTTGTGCAAGTGAAGCTATAACAGAGTTCATTCCAATATCAACCCCAAAATTCAAGTTTTACACAGAACAT GTAATTCCATATGTGATATTTCAAGAGTTAGCTGGTAAGCTCAAGATGTTGAAACTGCAGTATGAACTCGCCGTCGGAAATTCAGATTTTACACAATCAG CTGCAGAGTCTGCACACAAGCGAATTGAAAAGATTTTTGATTCTTTAATGTTTTGCTTGGATGAGCTTGGTGTTTGGTTGGCTCTAAAGGCTGCAGAGTC CTTATCTACCGATGAATATGAATCATTTTCATGTGGTAACTCTGGTGATGGACTCGTTAAAAGTTTTAGTCTTGCTACTGTGCATCATCTCACAACTTAT TTACCGTCTGGTCCTCAGTGGTCTATTGGTGATAATATTAAATCTGATGAGGATATGGGGCTTTTAACCTCCAAAGTTTGCTGTCTTGTCGACTCTCTGG TTGAGTACAGGGATTTGAATAATATGAGATGTATAGTTTTTGTTGAAAGGATCATTACAGCAGTTGTTCTTGAGACACTTTTGAATGCCTTGCTTCCGAA ATACAATAGTTGGAAGACTAAGTTCATAGCTGGACACAATTCTTGGTTGAAAAATCAAACAAGGAAGACACAAAATGAAATCGTGGAAGAATTTCGTGAT GGATTGGTCAACATCATTGTTGCAACATCGATTCTTGAAGAGGGTTTAGATGTCCAGAGTTGCAATTTGGTTATTAGATTTGACCCATGTCCCACAGTAT GCAGTTTCATACAGTCCCGAGGTCGTGCCAGAATGCAAAATTCAGATTACGTATTAATGGTTAAGAGTGGGGATTCAGTTACGCATTCAAGACTAGAGAA ATACCTTGCGAGTGGGGATATCATGAGGAAGGAGTCCCTGCGTCAATCTTCAATTCCTTGTGGTTCACTTGAACAACTTCCGGAGGAAGTTTATCGTGTT GAAAGCACTGGAGCCATTGTTAATCTTAGTTCTAGCATTACTTTGATATACTTGTATTGCTCATGGCTCCCTTCAGACGGGTACTTTAAACCGTCTCCAA GATGGGACAAAGAGACCGGAACACTGTATCTTCCCAAGAGCTGCCCTCTACAGCCTATTCAGGTACAAGGTGTCAAAAAGTTCTTAAAGAATATTGCATG TCTCGAAGCATGCAAGCAACTTCATAATATCGGAGCTTTGACTGATAATCTGGTTCCTGATATTGTCGTGGAAGAAGCAGAGGTGGATGAATTTGAGAAT GAGCCTTACAATGAGGAGCAACCATGTTATGTACCGACTCAATTGATCAACCACCTCTCGAAGGATGATAAGACAATGTATCACTGTTATTTAATTGAAT TGAAGCAAAATTTTAGCTATGACATCTCTGTGCGTGACATTGTGCTTGCAACAAGAAGTGAGCTTGATCCAGAAACTGAAAGCACGCAATTTGAAATGTG CTTTGACCGGGGTAGTCTGTCGATAAACTTAAGACGCATCGGAGCTGTTCATCTTTCCCCAAATGAGGTTCTTTTGTGTAAAACATTCCAAGTCACTATT CTCAAGATTCTTGTAGATCACAATATTGATAAGTTGGCAGCTAGTTTAAAATCTTTTGATAAACTCTATTTGGACGATGATCTGGAGATCGATTATCTTC TGCTACCGGCCACTGCCATACAACATAGACCTGCCGTAATTGATTGGGTGTCCATTACCTCTGTCAATCCATCTAAAATTATATGCGATAAGCATTCTCC AAAAGTATGGACGAAAAATGGTCTAGTTTGCCCTTGCATACTACAAAACTCTTTGGTTTATACTCCTCATAATGGTCGAATTTATATCACCACTAGTATA ATGGAATTGGATGGGAACTCACCTCTGGAACTAAGGGATGGTGGAGTTACGACGTACAAGAAATACTATGAAGAAAAGCATGGCACTCGATTGCATTTCG AATACCAACAGCTGCTTCATGCAAGGCGCATTTTTGTCGTTAAGAATTACTCTCATGGACGCAGACAAGAGAAGGATAGAGAAGCAGGAAATAAATTTGT TGAACTACCTCCTGAGTTGTGTTGCATAATCATGTCACCGATATCGATTAGTACGATTTATTCCTTCTCGTTTGCTCCATCAATCATGCATCACCTTGAG TCACTGTTTGGAGCTTACAACTTAAAAAGTACGTATCTGAAACAGTGCATCCAAGATGAAATTCAAATTGCCAAGGTATTAGAAGCAATCACTACAAAAA GATGCAAAGATCCCTTTAATTATGAGTCTCTAGAGACTCTTGGAGATTCTTTTCTAAAATACGCCGCCAGTAAGGAGCTGTTTAAATCCTACCAAAATCT TCACGAAGGTCTACTTAGCGTGAAGAGGACGAAGATAATTTCTAATGCTGCCCTCTGCAAGTTTGGATGCAATAGCGGACTTCCGGGCTTCATACGAAAT GCGCCTTTTGATCCCCATACCTGGCTTATTCCTGGTGATAAATCAGAAAGTTATAAATTAAAAAAGGAGTTGGATTCCAAGGGGACGACAATTTATGTTA GTGGAAAACGGAAATTAAAACGTAAGATTATTGCTGACGTTGTCGAGGCACTAATTGGTGCCTTCCTTACAAGTGGTGGTGAAAAGGCTGCATTGTTGTT TATGGATTGGGTAGGCATCAAAGTGAATTTTGACATTATGCCCTATGAGAGGCATTTAAGCATTCAACCAGAGAAGCTGTTAAATGTCAGCTTTCTAGAA TCTTTATTAAACTATAAATTCCGTGACCCTTCTCTTTTAGTTGAAGCTCTGACTCATGGTTCTTACATGCTTCCTGAAATTCCTAGTTGCTATCAGCGAC TGGAGTTTCTCGGAGACTCGATATTGGATTATCTTATTACCATGCATTTATATGAGAAATATCCTGGCTTGTCGCCGGGGCAATTAACTGATATGAGATC TGCTTCTGTAAACAATGATTGTTATGCATGGTCTGCCATTAAGGCCGGCTTGCACAAACACATACTCCATGCCTCACAGGAATTGCACAAGCACATCTTC AACACGCTTAATACCATTCAAAAGTTGGCTTCATTTACAACTTTTGGATGGGAGTCCGAGGCATCGTTTCCCAAGGTACTTGGCGACATTATAGAGTCTC TAGCTGGAGCAATTCTTGTTGATTCAGGATACGACAAGGATGTTGTGTGGCAAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_83180; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_256745
| Blastp | Endoribonuclease Dicer homolog 2 from Arabidopsis with 55.89% of identity |
|---|---|
| Blastx | Endoribonuclease Dicer homolog 2 from Arabidopsis with 55.44% of identity |
| Eggnog | Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)(COG0571) |
| Kegg | Link to kegg annotations (AT3G03300) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440116.1) |
| Pfam | Type III restriction enzyme, res subunit (PF04851.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |