| Id Trinity | FTRINITY_DN59142_c2_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_256728 |
| Sequence | TGAATAATATCACTCAATGAACTTTATACCTATATCAAGGGATTACATCGCGATGACATTTTTGGAAAGATTTTACTCTAATTATCATCAATATAGTCAT AAGGGAAAATCTCAAGTTTGTTGAGAGTTTTACCTTAATCATCATCCAATTCACAAGTTTAGACTTAAAAATATGTTTTTATTATTTTATTTTGTATATA TAGATATAGATTAGTTTCACTGTGTTGTTCAAGCTCAAAACCTATGCAAAACAAAAGCAGTTACATGAAAAGAATCAGAGAAACCATGGATGAAGTGACA ATTGAAACAAATACCTGTGATCAGTTGCAGAAGCAGGAACTTTCTCCTCACGCTCTTCCATTTGCTAGAAGCTATCAACTTGAAGCATTGGAAAAAGCTA TAAAGGAAAACACCATAGTTTTTTTGGAGACTGGTTCAGGAAAGACTTTGATAGCCATCATGCTTCTTCGCAGTTACGCGTATCTACTGCGAAAGCCTTC TCCTTACATTGCTGTGTTTTTGGTTCCCAAAGTTGTGCTGGTATCTCAACAAGCTGAATCTGTGAAAGCTCTCACCGATTTAAAAGTCGGAATGTATTGG GGTGAAATGGGAGTTGATTACTGGGATGCTGGTACCTGGAAAAAAGAAATCGAGAAATATGAGGTTCTGGTTATGACTCCGGCAATATTGCTTAGGAGCT TGAGGCATAGCTTTCTCAAATTGAACATGATAAAGGTTCTAATAATGGACGAATGCCATCATGCTAGGGGAAGAGATCCTTACGCTTGCATCATGAGGGA GTTTTATCATGACCAACTACAATCTGGTACCTCTGATCTACCTCGGATTTTCGGGATGACTGCGTCTCCAATTAAGTCAAAAGTTGGAAATTCTGAATGG ACCTTGGCAGAAAATATTCGCAAACTAATGACTCTAATGAATTCAAAGGTATATACTTGTTCAAGTGACGCTATTGCAGAGTTCATTCCACTATCAACCC CAAAATTCAAGTTTTACAGGGAAGATGTAATTCCACCTATGGTAGTTGAAGAGTTAGCTGGTAAGCTCAAGATGTTGAAAGAACAGCATGAAGAAGCCCT CGTAAATTCAGATTTCACACAATCCGCTATAGATTCTGCACAGAAGAGAATGGAAAAGATTTTGTTCGCTTTAATGTTTTGCTTGGATGAGCTTGGTATT TGGTTGGCTTTGAAGGCTGCAGAGTCCTTATCTTCCAATGAATCTGAATCAATTTCACGTAGTAACTCCGGGGATAGATTTGTTAAAAGTTTCAGTCTCG CTACCGTTCATCATCTTACAACTTACTTACCGTCTGGTCCCGAGTGGTCTTTTGGTGATAATATTAAATCTGATATGGATATAGGGCTGTTAACCTCCAA AGTTTACTGCCTTGTCGAATCTCTGCTCGAGTACAGGGATTTGAATAATATGAGATGTATAGTTTTTGTTGAGAGGGTCATTAGTGCAGTTGTTCTTGAG ATTCTTTTGAATGCCTTGCTTCCAAAATATAATAGCTGGAAGGCTAAATTCATAGCAGGACACAATTCTGGATTGAAAAATCAAACTAGGAATAAGCAAA ATGAAATTGTAGAAGAGTTTCGTGATGGATTGGTCAACATTATTGTTGCAACATCGATTCTTGAAGAGGGTTTAGATGTCCAAAGTTGCAATTTGGTTAT TAGATTTGACCCGTGTCCCACAGTATGCAGTTTCATACAGTCCCGAGGTCGTGCCAGAATGCAAAATTCAGATTACGTATTAATGGTTAAGAGTGGGGAT TCAGTTACGCATTCAAGACTAGAGAAATACCTTGCGAGTGGGGATATCATGAGGAAGGAGTCCCTGCGTCAATCTTCAATTCCTTGTGGTTCACTTGAAC AACTTCCGGAGGAAGTTTATCGTGTTGAAAGCACTGGAGCCATTGTTAATCTTAGTTCTAGCATTACTTTGATATACTTGTATTGCTCATGGCTCCCTTC AGACGGGTACTTTAAACCGTCTCCAAGATGGGACAAAGAGACCGGAACACTGTATCTTCCCAAGAGCTGCCCTCTACAGCCTATTCAGGTACAAGGTGTC AAAAAGTTCTTAAAGAATATTGCATGTCTCGAAGCATGCAAGCAACTTCATAATATCGGAGCTTTGACTGATAATCTGGTTCCTGATATTGTCGTGGAAG AAGCAGAGGTGGATGAATTTGAGAATGAGCCTTACAATGAGGAGCAACCATGTTATGTACCGACTCAATTGATCAACCACCTCTCGAAGGATGATAAGAC AATGTATCACTGTTATTTAATTGAATTGAAGCAAAATTTTAGCTATGACATCTCTGTGCGTGACATTGTGCTTGCAACAAGAAGTGAGCTTGATCCAGAA ACTGAAAGCACGCAATTTGAAATGTGCTTTGACCGGGGTAGTCTGTCGATAAACTTAAGACGCATCGGAGCTGTTCATCTTTCCCCAAATGAGGTTCTTT TGTGTAAAACATTCCAAGTCACTATTCTCAAGATTCTTGTAGATCACAATATTGATAAGTTGGCAGCTAGTTTAAAATCTTTTGATAAACTCTATTTGGA CGATGATCTGGAGATCGATTATCTTCTGCTACCGGCCACTGCCATACAACATAGACCTGCCGTAATTGATTGGGTGTCCATTACCTCTGTCAATCCATCT AAAATTATATGCGATAAGCATTCTCCAAAAGTATGGACGAAAAATGGTCTAGTTTGCCCTTGCATACTACAAAACTCTTTGGTTTATACTCCTCATAATG GTCGAATTTATATCACCACTAGTATAATGGAATTGGATGGGAACTCACCTCTGGAACTAAGGGATGGTGGAGTTACGACGTACAAGAAATACTATGAAGA AAAGCATGGCACTCGATTGCATTTCGAATACCAACAGCTGCTTCATGCAAGGCGCATTTTTGTCGTTAAGAATTACTCTCATGGACGCAGACAAGAGAAG GATAGAGCAGGCAAGAACTATGTTGAACTACCTCCTGAATTGTGCTGTATAATCATGTCACCAATATCAATTAGTACGCTTTATTCCTTCTCATTTGTTC CATCAATCATGCATCGACTTGAGTCATTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_83180; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_256728
| Blastp | Endoribonuclease Dicer homolog 2 from Arabidopsis with 53.76% of identity |
|---|---|
| Blastx | Endoribonuclease Dicer homolog 2 from Arabidopsis with 53.76% of identity |
| Eggnog | Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)(COG0571) |
| Kegg | Link to kegg annotations (AT3G03300) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419124.1) |
| Pfam | Type III restriction enzyme, res subunit (PF04851.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |