| Id Trinity | FTRINITY_DN59142_c2_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_256729 |
| Sequence | CAACTTTTCTACCAACAATCCACAACTCTTAACTATATGAATATTGAAAAATAAGCCAAGAAAGCATGGAAGAAATGACAATGGCAATAGATAACTGTAG CCAGCAGAAGCAGCTTTCTCATCATGCTCTTCCATTTGCAAGAAGCTATCAGGTTGAAGCATTGGAGAAAGCTATGAAGGAAAACACCATTGTGTTCTTA GAGACTGGTGCAGGCAAGACTTTGATAGCCATAATGCTTCTCCGAAGCTATGCTTATCTTCTGCGAAAGCCTTCGCCTTACATTGCAGTTTTCTTGGTTC CGAAAGTTGTGTTGGTATCTCAACAAGCTGAAGCGGTGAAAGTGCTCACTGATTTAAAAGTGGGAATGTATTGGGGAGAAATGGGAGTTGATTACTGGGA TGCTTCCACCTGGAACAAAGAATTTGAGAAACATGAGGTTCTGGTTATGACCCCCGCAATATTGCTTAGGAGCTTGAGGCATAGCTTTCTCAAACTTAAC ATGATAAAGGTTCTAATAATGGACGAATGCCATCATGCTAGGGGTAGAGACCCTTATGCTTGTATCATGAGAGAGTTTTATCATGACCAATTAAAATCTG GTGTCTCTGATCTACCTCGGATATTCGGGATGACTGCATCTCCAATTAAGACAAATGTTGGGAATTCTGAATGGACCTTGGCAGAAAGTATTCACAAACT AATGACTCTAATGCATTCAAAGGTATATACTTGTGCAAGTGAAGCTATAACAGAGTTCATTCCAATATCAACCCCAAAATTCAAGTTTTACAGGGAAGAT GAAATTTCATATGTGCTATTTCAAGACTTAGCTGTTAAGATCAAGATGTTAAAACAGCAGGTGTGTAAAGTTAAGGAGTTGTGCAATAATTCCCCAGGTG TTAAGAGTAGTAATAAGTAATAACTCTCTAAATCAATGCCAGATTGTCAACACTGTCATGTTATTATCTTTATTAGTCAATCATTTCTACTTTACAAGTT AAGCATTTTTTTTATCAGATATAGTTGATTATTTCCTTGAGGTTATTGACCATGGATATTCTGTTCCCTCAGCATGAACTCATCCTCAGAAATTCAGATT TCACAGAATCAGCTGCAGAGTCTGCACACAAACGAATCGAAAAGAGTTTTTATGCTATAATGTTTTGCTTGGATGAGCTTGGTGTTTGGTTGGCTTTAAG GGCTGCAGAGTCTTTATTTTCCAATGAAACCGAATTATTTTCACGTGACAACTCTGGGGATGGACTTGTTAAAAGTTTCAGTCTTGCTACTGTGAATCAT CTTACAACTTACTTACCGTCTGGTTCTCAGTGGTCTATTGGTGATAATATTAAATCTGACGTGGATATGGGGCTGTTAACCTCCAAAGTTTTCTGTCTTG TCGAATCTCTGCTTGAGTACAGGGATTTGAATAATATGAGATGTATCGTTTTTGTTGAAAGGGTCATAACAGCAGTTGTTCTTGAGACTCTTTTGAATGT CTTGCTTCCAAAATACAATAGCTGGAAGACTAAATTTATAGCAGGACACAATTCTGGATTGAAAAATCAAACTAGGAATAAGCAAAATGAAATTGTAGAA GAGTTTCGTGATGGATTGGTCAACATTATTGTTGCAACATCGATTCTTGAAGAGGGTTTAGATGTCCAAAGTTGCAATTTGGTTATTAGATTTGACCCGT GTCCCACAGTATGCAGTTTCATACAGTCCCGAGGTCGTGCCAGAATGCAAAATTCAGATTACGTATTAATGGTTAAGAGTGGGGATTCAGTTACGCATTC AAGACTAGAGAAATACCTTGCGAGTGGGGATATCATGAGGAAGGAGTCCCTGCGTCAATCTTCAATTCCTTGTGGTTCACTTGAACAACTTCCGGAGGAA GTTTATCGCGTTGAAAGCACTGGAGCCATTGTTAATCTTAGTTCTAGCATTACATTGATATACTTGTATTGCTCATGGCTCCCTTCAGATGGGTACTTTA AACCATCTCCAAGATGGGACAAAGAGACCGGGACACTATATCTTCCCAAGAGCTGCCCTCTGCAGCAACCTATTCAGGTACAAGGTGACAAAAAATTCTC GAAGAATATTGCATGCCTCGAAGCATGCAAACAACTTCATAAAATTGGAGCTTTGACTGATAATCTCGTTCCAGATATTGTCGTGGAAGAAGCAGAGGTG GATGCATTTGAGAATGAACCTTACACTGAGGAGCAACCAAGTTATGTACCATACCAATTGGTCAACAGCTTGTCAAAAAACGAGAAGAAAATTTACCACT GTTATTTGATCGAGTTGAAGCAAAATTTTAGCTATGACATCTCTGTCCGCGACATTGTGTTTGCAACAAGAAATGAGCTTGATCCAGTAATTGGAAGCAC ACAATTTGAAATGTGCTTTGACAGGGGTACCCTATCAGTAAACTTGAGATGCTTTGGAACTGTTCATCTTTCCCCAAATGAGGTTCTTTTGTGTAAAAAA TTCCAAGTCACTATTCTCAAGATTCTTGTAGATCGTAATATGGATAAGTTGGTAGCGAGTTTAGAATCTTTAAATAAACTCTATTTGGATGATTATCTTG AGATTGATTATCTTCTGCTACCAGCCACTGCCATACAGCATAGACCTGCTATAATTGATTGGCTTTCCATTACCTCTACCGATCCATCAAAAATTACATG TGAGAAGCATACTCCAAAAGTATGGACAAAGAATGGTCTAGTGTGCCCTTGCATGCTACAAGACTCTTTGGTTTATACTCCTCACAATGGTCATATTTAT ATGACCACTAACATAATGGAATTGGATGGGAACTCAACTCTGGAACTAAAGGATGGTGGAGTTACTACGTACAAGAAATACTATGAAGAAAAGCATGGCA CTCGATTGCATTTCGAATACCAACAGCTGCTTCATGCAAGGCGCATTTTTGTCGTTAAGAATTACTCTCATGGACGCAGACAAGAGAAGGATAGAGAAGC AGGAAATAAATTTGTTGAACTACCTCCTGAGTTGTGTTGCATAATCATGTCACCGATATCGATTAGTACGATTTATTCCTTCTCGTTTGCTCCATCAATC ATGCATCACCTTGAGTCACTGTTTGGAGCTTACAACTTAAAAAGTACGTATCTGAAACAGTGCATCCAAGATGAAATTCAAATTGCCAAGGTATTAGAAG CAATCACTACAAAAAGATGCAAAGATCCCTTTAATTATGAGTCTCTAGAGACTCTTGGAGATTCTTTTCTAAAATACGCCGCCAGTAAGGAGCTGTTTAA ATCCTACCAAAATCTTCACGAAGGTCTACTTAGCGTGAAGAGGACGAAGATAATTTCTAATGCTGCCCTCTGCAAGTTTGGATGCAATAGCGGACTTCCG GGCTTCATACGAAATGCGCCTTTTGATCCCCATACCTGGCTTATTCCTGGTGATAAATCGGAAAGTTTTAAATTAAAAGAGGAGTTGGATTCCAACAGGC CGAAAATCTATGTTACCGGAAAACAAAAATTGAAACGTAAGATTATTGCGGACGTTGTAGAGGCACTAATTGGCGCCTTCCTTACCAGTGGTGGTGAAAG GGCTGCATTGTTGTTTATGGATTGGATAGGCATTAAAGTGAATTTTGACATTATACCCTATGAGAGGCACTTAAGCATTCAACCAGAGAAGCTGGTAAAT GTCAACTTTCTAGAATCTTTACTGAAATACTCGTTTCGCGACCGTTCTCTGTTAGTAGAAGCTCTGACCCATGGTTCTTACATGCTGCCTGAAATTCCTA GTTGTTATCAGCGACTAGAATTTCTCGGAGACTCGATATTGGATTATCTTATTACCATGCATTTATATGAGAAATATCCAGGCTTGTCACCGGGGCAATT AACTGACATGAGAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_83180; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_256729
| Blastp | Endoribonuclease Dicer homolog 2 from Arabidopsis with 51.86% of identity |
|---|---|
| Blastx | Endoribonuclease Dicer homolog 2 from Arabidopsis with 51.86% of identity |
| Eggnog | Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)(COG0571) |
| Kegg | Link to kegg annotations (AT3G03300) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426302.1) |
| Pfam | Helicase conserved C-terminal domain (PF00271.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |