| Id Trinity | FTRINITY_DN59142_c2_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_256736 |
| Sequence | CAACTTTTCTACCAACAATCCACAACTCTTAACTATATGAATATTGAAAAATAAGCCAAGAAAGCATGGAAGAAATGACAATGGCAATAGATAACTGTAG CCAGCAGAAGCAGCTTTCTCATCATGCTCTTCCATTTGCAAGAAGCTATCAGGTTGAAGCATTGGAGAAAGCTATGAAGGAAAACACCATTGTGTTCTTA GAGACTGGTGCAGGCAAGACTTTGATAGCCATAATGCTTCTCCGAAGCTATGCTTATCTTCTGCGAAAGCCTTCGCCTTACATTGCAGTTTTCTTGGTTC CGAAAGTTGTGTTGGTATCTCAACAAGCTGAAGCGGTGAAAGTGCTCACTGATTTAAAAGTGGGAATGTATTGGGGAGAAATGGGAGTTGATTACTGGGA TGCTTCCACCTGGAACAAAGAATTTGAGAAACATGAGGTTCTGGTTATGACCCCCGCAATATTGCTTAGGAGCTTGAGGCATAGCTTTCTCAAACTTAAC ATGATAAAGGTTCTAATAATGGACGAATGCCATCATGCTAGGGGTAGAGACCCTTATGCTTGTATCATGAGAGAGTTTTATCATGACCAATTAAAATCTG GTGTCTCTGATCTACCTCGGATATTCGGGATGACTGCATCTCCAATTAAGACAAATGTTGGGAATTCTGAATGGACCTTGGCAGAAAGTATTCACAAACT AATGACTCTAATGCATTCAAAGGTATATACTTGTGCAAGTGAAGCTATAACAGAGTTCATTCCAATATCAACCCCAAAATTCAAGTTTTACAGGGAAGAT GAAATTTCATATGTGCTATTTCAAGACTTAGCTGTTAAGATCAAGATGTTAAAACAGCAGGTGTGTAAAGTTAAGGAGTTGTGCAATAATTCCCCAGGTG TTAAGAGTAGTAATAAGTAATAACTCTCTAAATCAATGCCAGATTGTCAACACTGTCATGTTATTATCTTTATTAGTCAATCATTTCTACTTTACAAGTT AAGCATTTTTTTTATCAGATATAGTTGATTATTTCCTTGAGGTTATTGACCATGGATATTCTGTTCCCTCAGCATGAACTCATCCTCAGAAATTCAGATT TCACAGAATCAGCTGCAGAGTCTGCACACAAACGAATCGAAAAGAGTTTTTATGCTATAATGTTTTGCTTGGATGAGCTTGGTGTTTGGTTGGCTTTAAG GGTTCTTATTTGCCCTTCTCCTGCTGCAGTTTTATTGTTTTGGTGTTTGTTCATTTTTCATGATTGGTTAATTTAGTTCGAACATTTTTTTCTTCACAGG CTGCAGAGTCTTTATTTTCCAATGAAACCGAATTATTTTCACGTGACAACTCTGGGGATGGACTTGTTAAAAGTTTCAGTCTTGCTACTGTGAATCATCT TACAACTTACTTACCGTCTGGTTCTCAGTGGTCTATTGGTGATAATATTAAATCTGACGTGGATATGGGGCTGTTAACCTCCAAAGTTTTCTGTCTTGTC GAATCTCTGCTTGAGTACAGGGATTTGAATAATATGAGATGTATCGTTTTTGTTGAAAGGGTCATAACAGCAGTTGTTCTTGAGACTCTTTTGAATGTCT TGCTTCCAAAATACAATAGCTGGAAGACTAAATTTATAGCAGGACACAATTCTGGATTGAAAAATCAAACTAGGAATAAGCAAAATGAAATTGTAGAAGA GTTTCGTGATGGATTGGTCAACATTATTGTTGCAACATCGATTCTTGAAGAGGGTTTAGATGTCCAAAGTTGCAATTTGGTTATTAGATTTGACCCGTGT CCCACAGTATGCAGTTTCATACAGTCCCGAGGTCGTGCCAGAATGCAAAATTCAGATTACGTATTAATGGTTAAGAGTGGGGATTCAGTTACGCATTCAA GACTAGAGAAATACCTTGCGAGTGGGGATATCATGAGGAAGGAGTCCCTGCGTCAATCTTCAATTCCTTGTGGTTCACTTGAACAACTTCCGGAGGAAGT TTATCGTGTTGAAAGCACTGGAGCCATTGTTAATCTTAGTTCTAGCATTACTTTGATATACTTGTATTGCTCATGGCTCCCTTCAGACGGGTACTTTAAA CCGTCTCCAAGATGGGACAAAGAGACCGGAACACTGTATCTTCCCAAGAGCTGCCCTCTACAGCCTATTCAGGTACAAGGTGTCAAAAAGTTCTTAAAGA ATATTGCATGTCTCGAAGCATGCAAGCAACTTCATAATATCGGAGCTTTGACTGATAATCTGGTTCCTGATATTGTCGTGGAAGAAGCAGAGGTGGATGA ATTTGAGAATGAGCCTTACAATGAGGAGCAACCATGTTATGTACCGACTCAATTGATCAACCACCTCTCGAAGGATGATAAGACAATGTATCACTGTTAT TTAATTGAATTGAAGCAAAATTTTAGCTATGACATCTCTGTGCGTGACATTGTGCTTGCAACAAGAAGTGAGCTTGATCCAGAAACTGAAAGCACGCAAT TTGAAATGTGCTTTGACCGGGGTAGTCTGTCGATAAACTTAAGACGCATCGGAGCTGTTCATCTTTCCCCAAATGAGGTTCTTTTGTGTAAAACATTCCA AGTCACTATTCTCAAGATTCTTGTAGATCACAATATTGATAAGTTGGCAGCTAGTTTAAAATCTTTTGATAAACTCTATTTGGACGATGATCTGGAGATC GATTATCTTCTGCTACCGGCCACTGCCATACAACATAGACCTGCCGTAATTGATTGGGTGTCCATTACCTCTGTCAATCCATCTAAAATTATATGCGATA AGCATTCTCCAAAAGTATGGACGAAAAATGGTCTAGTTTGCCCTTGCATACTACAAAACTCTTTGGTTTATACTCCTCATAATGGTCGAATTTATATCAC CACTAGTATAATGGAATTGGATGGGAACTCACCTCTGGAACTAAGGGATGGTGGAGTTACGACGTACAAGAAATACTATGAAGAAAAGCATGGCACTCGA TTGCATTTCGAATACCAACAGCTGCTTCATGCAAGGCGCATTTTTGTCGTTAAGAATTACTCTCATGGACGCAGACAAGAGAAGGATAGAGAAGCAGGAA ATAAATTTGTTGAACTACCTCCTGAGTTGTGTTGCATAATCATGTCACCGATATCGATTAGTACGATTTATTCCTTCTCGTTTGCTCCATCAATCATGCA TCACCTTGAGTCACTGTTTGGAGCTTACAACTTAAAAAGTACGTATCTGAAACAGTGCATCCAAGATGAAATTCAAATTGCCAAGGTATTAGAAGCAATC ACTACAAAAAGATGCAAAGATCCCTTTAATTATGAGTCTCTAGAGACTCTTGGAGATTCTTTTCTAAAATACGCCGCCAGTAAGGAGCTGTTTAAATCCT ACCAAAATCTTCACGAAGGTCTACTTAGCGTGAAGAGGACGAAGATAATTTCTAATGCTGCCCTCTGCAAGTTTGGATGCAATAGCGGACTTCCGGGCTT CATACGAAATGCGCCTTTTGATCCCCATACCTGGCTTATTCCTGGTGATAAATCAGAAAGTTATAAATTAAAAAAGGAGTTGGATTCCAAGGGGACGACA ATTTATGTTAGTGGAAAACGGAAATTAAAACGTAAGATTATTGCTGACGTTGTCGAGGCACTAATTGGTGCCTTCCTTACAAGTGGTGGTGAAAAGGCTG CATTGTTGTTTATGGATTGGGTAGGCATCAAAGTGAATTTTGACATTATGCCCTATGAGAGGCATTTAAGCATTCAACCAGAGAAGCTGTTAAATGTCAG CTTTCTAGAATCTTTATTAAACTATAAATTCCGTGACCCTTCTCTTTTAGTTGAAGCTCTGACTCATGGTTCTTACATGCTTCCTGAAATTCCTAGTTGC TATCAGCGACTGGAGTTTCTCGGAGACTCGATATTGGATTATCTTATTACCATGCATTTATATGAGAAATATCCTGGCTTGTCGCCGGGGCAATTAACTG ATATGAGATCTGCTTCTGTAAACAATGATTGTTATGCATGGTCTGCCATTAAGGCCGGCTTGCACAAACACATACTCCATGCCTCACAGGAATTGCACAA GCACATCTTCAACACGCTTAATACCATTCAAAAGTTGGCTTCATTTACAACTTTTGGATGGGAGTCCGAGGCATCGTTTCCCAAGGTACTTGGCGACATT ATAGAGTCTCTAGCTGGAGCAATTCTTGTTGATTCAGGATACGACAAGGATGTTGTGTGGCAAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_83180; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_256736
| Blastp | Endoribonuclease Dicer homolog 2 from Arabidopsis with 56.03% of identity |
|---|---|
| Blastx | Endoribonuclease Dicer homolog 2 from Arabidopsis with 53.37% of identity |
| Eggnog | Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)(COG0571) |
| Kegg | Link to kegg annotations (AT3G03300) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440116.1) |
| Pfam | Helicase conserved C-terminal domain (PF00271.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |