| Id Trinity | FTRINITY_DN59149_c3_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_256768 |
| Sequence | TGATTAATGATAAAAAGTAATAGTCATATCTTGGCAGTCCACCCATGACATCACACACTATGGCTATTACTTGCTACAAATGTACTATCAGTAAAAAACA ATAGTCTATCATTCAGACTCCAGTACTAGTATTACAAAGAACTTTTGAGAGTTAAATTTCCTAATTCTGTCTTCTTGTTCAGACTCCCCTTCTTTTCAGT ACTTTCAATTAATGGTTGGGTAGTGGTTTTGGAAACATCGAAAACCTTGATGTTTTAGATAAATACGGGCATTTGTGCTAAATATGGCCACAATTGCAAT CAGGATACAATTTCGGTGACTTTCAAAATCTTAACACATCCACACCTATCATTTGTGAGCGTTAGTCACGCTCATGGACCCAGATTTAAAACCTTGCTGC ACACACCCTTTAGAAGTATTACATCAATCCATCATATCTATGGAATCACAACTTCTATGTTCTCACTTCATATGTTCAAACTATCATTACCATATCCCTA AGAATCTCCTCTAGCCAAATGGCAACCATTTTTTCCAATTCCAACTCTCAATGTAGAAAATCCATTCTTCTCATTCTCCTCAACACATCCTTCATCTTCT TCTTGTGTTTCCTCTTCAAAGTTCATCTCCAACACTTCAATTCTAACTCTCAACACCATTCAATCTTGAACCATGTAAGGTTACTCACTGATATTAGTGT TGATGGCTGCACTGAACTCCACAAATACTCAGATTATACCTCTAAGTGCTTATATGTAAAAACACATCTTCATTGCAGGTCTAAAGGGTACATAAACTAT CTTATTATCTTCTATTGCAATCTTGGTCAATCCTCAATTATTGGTTATGCACTCTATGCCTTGTGGCTAGTGGTGTTATTCTATCTTTTAGGTGACACAG CTTCCAATTACTTTTGCAACAACTTAGAAGGCTTGTCCAAGATATTGGGGCTATCTCCTACCATAGCTGGAGTGACCCTTCTTTCTCTTGGAAATGGTGC TCCTGATTTCTTTGCAACTGTTGTTTCTTTTACAAGTTCCAACAATGGTGCAGTTGGGCTAAACAGCATTCTAGGAGGGGCATTTTTTGTGTCTAGTGCT GTATTAGGGATTATAACCATTCTGGTTAGCTCACAAAATGTTGCAGTTGAAAAGGGTAGCTTCATCAAGAATGTACTTTTCTTCCTTTTCTCTCTAACCA TCCTCATTATCATAATTTCCATTGGTGAAATTAGCTTCTTTGCTTCAATCTGCTATGTTTCTATCTACTTCCTTTATGTCTTTTCTGTCTCTGCTACACA TTTTATCTATGGATGGGGTAATAAAAAAGAAAAGGAATTTGAATTTTCTTCAGAAGATTTACTAGAATATGGTATACCATTGTTAGGCTATGTTGATGAT GAAAAAGTGATTGAAGATAAGGAAGAAAAGCTTGGGAGTGTTGATATGAATTCATTTAATTTTACACACATTAGTAAGTTTTTACAAGTAGTTGAATTAC CACTTTGCTTGCTAAGAAAGCTTACTATACCAGTGGTTAGTGAGGAAAAGTGGTCAAGGCCTTATGCAGTTATCTCTGTCACATTAGCACCAGTTTTTTT GGCAGCACTTTATAACACTCATGGTGGTAATGTGAGTTCAATGAGTTGTGTTGTTACATACTTTTCAGCTTCTTTGATTGGCATAGTTTTGGGGAATATA GCATATGTGACAACTAAAAGCTATAGTCCACCAAAAAAGTGCTTATTTCCTTGGTTAGCTGGTGGTTTTGCTATGAGTGTGACATGGACTTATATCATTG CTGAGGAGTTGGTTTCCCTATTGGTCTCACTTGGGAATATCATTGGGGTTAGCCCTTCAGTTCTAGGACTAACTGTCCTAGCTTGGGGTAACTCACTTGG TGATTTGATAGCCAATGGTGCCATGGCTTTGAATGGTGGGGCAGATGGTGCACAAATGGCTATATCTGGCTGCTATGCTGGTCCTATGTTTAATACTTTG ATGGGTTTGGGCTTGCCTTTTGTTCTATCAGCATGGTCTGAATACCCTAACAATTATGTCATTCCTGAAGATCCTTCCCTCTATGAAACCATTTTGTTCT TGATGGGAGGGTTGCTTTGGGCACTCGTGATATTGCCAAACAAGAATATGAAGCTAGATAAGTCCTTAGGAGCAGGACTCTTGGCCATATACTTTTGCTT TCTGTTTATAAGGATAGCCATGGCTATAGGTGTTTTGAAATTGTAGAGATGTGGTTTCTATGGGGAAAGGGTCAAATGTGGTTCATCTCATGAAACTCAC TCATGTTAATTATACATTTCACATGCCACAAGCCAAACTTGTAAAGTTAATGAATTTAATATATATGTATTGTGTATGTACTATTGTAAAAAAATTATGG AGGTATTATATCTTTTATCATTAATGTGAGTTGCTCTTATTTAAAAAAAAACCAATAATGATCAATACATGAGTGATAGATTACAATATTAATAGACATT ATTTTCTGACTTGTAACTATGTTTTGCTTTATTACTGGTTATATATTCACCAACTTTTGCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_83264; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_256768
| Blastp | Cation/calcium exchanger 1 from Arabidopsis with 54.83% of identity |
|---|---|
| Blastx | Cation/calcium exchanger 1 from Arabidopsis with 54.7% of identity |
| Eggnog | exchanger(COG0530) |
| Kegg | Link to kegg annotations (AT5G17860) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437480.1) |
| Pfam | Sodium/calcium exchanger protein (PF01699.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |