Id Trinity | FTRINITY_DN59150_c3_g1_i15 |
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Name Transcript | Ll_transcript_254332 |
Sequence | AGTGGTTATATTACTGGGGAAATTAAGCCTTCGAGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAACATTCATCAAGGGAAGCCTCTCTTTTTGGAG GAGATGGTGATGTCACTGAGAAACCTGTAGACCCCATTAAGGTATATTCAGAAAAGGAGTTAATCAGAGAGGTTGAGAAGATTGCGTCTACCCTTGTACC ACAAAAAGACTGGTCAATTCGTATTGCTGCCATGCAGAGAATTGAAGGTCTCATTCTAGGAGGTGCTGCTGATTATCTGTCTTTCCGTGGACTTCTGAAA CAACTTATTGGACCGTTAAGCACACAATTGTCAGATCGAAGGTCTAGCATTGTCAAGCAGGCTTGCCATTTACTGTGCTTTTTGTCAAAGGAACTCTTGG GTGATTTTGAAGTATGTGCTGAAATGTTTATTCCAGTCCTTTTCAAGCTGGTTGTGATAACTGTGCTTGTAATTGCAGAGTCTTCAGACAACTGCATTAA AACGATGCTGCGCAACTGCAAAGTTTCTCGTGTGCTTCCACGTGTAGCTGACTGTGCAAAAAATGACCGCAATGCAATACTTCGTGCCAGGTGTTGTGAA TATGCTCTTTTGATCCTGGAACATTGGCCTGATGCACCAGAAATACATCGATCAGCTAATTTATATGAGGATATGATAAAGTGTTGTGTCAAAGACGCAA TGAGTGAGGTAGCTTATAGTTTTAGGTTATTTGACTTCTATAAACCTAAATCGTTCGGCATATATGTCAACTCTGATTAACTTTTCCATTTTGTTGCATC ACTTTTGTAAGTGTGTTGTAGTTGCAGGTGTGGGAAGTAAAAGTGATATCCGTCCTGTTTGTTTATCTTTTCGTAAAATCGCAGTTTAGTGTATAATATG GTAATCTGCAATTGTGTGCAGAAGTGAAGCTTCCTTCTATTATGACCAGCCAAAGATAAAGTGGCCTGTCCAATGTTTTCACACATACATACACATATCG ACATCATAAACCGTCTCACTTTGATACTGGTAGGAACAGAAAATGCAGACAGTATTGTATGAAGTAACTGATATATCTCATATTCTCATGCTGATACAGG TGTAGAAGAAGGTTCTGTATAGATGTTTATCTCTCTTTCTCACTCTCTAATCTCTATATAGAAACTAACATAGAACCAGAAATAGAAATGTTAGAGAAGA CGTCAAAGGTCTGCAAACCTCCCTGTCTTAATTGCAAAACCTTGCTCAGTTGATGCCTGCCTTCACCACTCACCTCTATTTTTCCTTGAGCCTCTCCTCC CATCGGAGCTTCCTTTTCCGCTTCCTCACTTCATGACTTCCTACGTGTATCAATTCAAACTAGGCCTGTGTGCTCTATCAAAAAGCAAATTTTCTGATTG GCCATTTAGGTACAAGTTCATTTTAATGGTTTCACTAGAGTTATTCTTGGTCTTCCTCTTCCTCTAATTATTGGTTCATTCTCTGTTTGATCAATCTTCT AATGGGGCTTCTATTTGTCGTTTCACATTTCCAAACCATCCTAGTCATGATTCAACCACCTTTTCCTCATTAGGTACCACTCCTTTCTCTCTAATACATT CATTCCTATCTTAACTCTTTTTCATATGACCACTCATCCAACACAAATTCTTGACTCTGCTACAGTCGTGCTCCTGTTTGCACTTTACTGCCCCAAAGAA ATTGTAAAAGTTGTTTGTCAAATGATAAAAACAATAGATATATGTACTAGGAGTGCTGACCCCACCTTGTGGAAAAAGATTTGACTCAATCTTTCTGAAG GGGTTTGCAGAATGATATGATTATTTCATTATTCTGTTTCATTATACAATCGTGTGTGTTTAGATGTTTGAAAAACTGTCTTGTAGTATGATGCAGAGTT ACTCCGTAAACTATGTTACTCTCTTTTTTCTTGCAAACCTTTTTGTTTGTAAAATTTTATTGGTATAAAACAGAAGCTTGTTAATGTATTCATTGACTTG ACATTGTTCATACATGACCTCATTATTGTTAAGGTATATATGTGCATGAAAATGATCAGCATTAAACTTGATAGGTACGATCTACTGCAAGGATGTGCTA CAGAATGTTCGCAAAAACTTGGCCAGAGCGTTCTAGTCGCTTATTTTTGTCCTTTGACCCTGTTATTCAAAGGCTAATAAATGAAGAGGATGGAGGAATA CATATGCGACATGCTTCACCTTACGTTCGTGATAGAGGTGCAGCAATGTCATTACCCAGTCAAGCCTCTGCTTCTTCATATTTACCTGGTTATGGAACTT CTGCTATTGTTGCAATGGATAGAAGTTCAAGTTTATCGTCTGGGACATCTATCTCCTCCGATTTACTTCTTTCACAAGCTAAGTCTCTCGGAGAGGGTAC AGAGCGAAGTTTGGAAAGTGTTTTACATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGAGGCCTGAATTTGTCTGATAAGTCCAATTCA TCTCATCGACCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCTGCAGTTGTCCCAGCATCTAATCATCCGACTAGCT CTTCAATGACAGAATCAACTCCCTCTGTTGTCAATAAAGGTATTAACCAAAATGGTGGTTTGGGTCTGTCTGACATAATCACCCAAATTCAATCTTCCAA AGATTCTGGCAAGTTATCATATCATAGTGATGTTGGTATCCAGTCTTTATCAGCATTGCCATCATATTCAAGTAAAAGGGGTACTGAAAGATTACAAGAA AAAAGTTCCATTGACGAAAACAGTGACATTAAGGAGGCTAGGCGATATATGAACCCGGACACCAATAGGCATTTTATAGATACACCTTACAGAGATGACA ACTTCAGGGATTTTCAGAATAATTATGTGCCTAATTTCCAGAGGCCACTACTGAGAAAGAATGTAGCGGGACGTATGTCTGCTGGCAGGAGGAGTTTTGA TGATAGCCATTTATCTCTTGTGTCAAATTATGTAGAGGGACCAGCATCTCTTCACGAATCTCTGTGTGAAGGACTTAGTTCAGGTTCTAACTGGTCTGCT AGGGTTGCTGCCTTTAATTATCTCCACTCTTTGTTGCAGCAAGGTCAAAAGGGAACTCAAGAAGTACTGCAGAATTTTGAGAAGGTCATGAAATTGTTTT TCCAGCACTTAGATGATCCCCACCATAAAATTGCACAGGCTGCTCTTTCCACACTAGCAGATATCATTCTAGCATGCAGAAAGCCCTTTGAGGGTTATAT GGAACGAATGCTGCCCCATGTGTTTTCTCGGTTAATTGACCCCAAAGAGCTTGTTCGGCAGGCATGCTCGGCAACTTTGGAGGTTGTTAGCAAAACATAC AGTATAGATTCTCTCTTACCTGCATTGCTACGCTCACTCGATGAACAAAGGTCTCCAAAGGCAAAATTGGCTGTCATCGAGTTTGCAATTAGCTCCTTTA AGAAGCATGCAATGAATCCAGAAGGTGCTGCTAATATTGGCATCCTGAAATTATGGCTTGTTAAGTTAACCCCATTGGTTCATGACAAAAATACAAAGCT TAAAGAAGCAGCTATTACATGCATTATATCGGTGTACTCTCACTTTGATTCAACTGCAGTTCTGAATTTTATCCTTAGTTTGTCAGTTGAGGAACAAAAT TCTTTGAGACGAGCCCTTAAGCAACGCACACCTCGCATTGAAGTGGAGTTGATGAACTATCTGCAGAACAAGAAAGAGCGGCAACGTAAGTCTTCCTATG ATCCATCTGATGTTGTGGGGTCATCTTCTGAAGATGGATATGTCGGCTTTTATAGGAAAAATCATTACCTTGGAAGGTATTCTGCTGGTTCTCTAGATAG TGATGGTGGAAAGAAGTTGACTTCCCACGATTCAACCATGATTAAAGCCAGTACTGGCCTAGCAGCTTCTGATGAAACTCAGGAGCATTCATATCAGAAT CCTGAGATTGATTCTAATAGTGGTATTCTCGATTCAAAAAGTAAAGATCATACTTATACATTCAACATGGCTCAAAACTTTGGTTTTGAAACAAGCCAAG TAGGACATGTAGACAATAGTATAAACTTTGAGGGTCTATCATCTCATCTGGATGCTAATGGTCTGATGTCATTAGAACATATAAATGTTTCTCAAGGCTT TGAAAATGACGAAGAACATCTTTCCGACTGGAACCATAATAATTATTCAGCTGAAGAAGTGACGGTTAACTCCATGACAGACACAGGGCCCAGCATTATT CAAATTCTTCATATGATATGCAGTGGGAGTGATGGAAGCTTTGTTTCAAATAAGAAGACCGCACTTCAACGGCTAGTTGAAGCTTCTATAGCAAATGACC ATGCTGTTTGGACCCAGTATTTCAATCAGATTTTGACTGCTATACTTGAGGTGCTGGATGATCCAGATTCCTCGATTAGAGAGCTTACTCTTTCATTGAT AGTTGAAATGCTTAAAAACCAGAAACTTGCCATGGAAAATTCAGTCGAGGTTGTAATTGAA BLAST |
Tissue | flowers |
Gene name | LI_gene_83283; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_254332
Blastp | CLIP-associated protein from Arabidopsis with 65.38% of identity |
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Blastx | CLIP-associated protein from Arabidopsis with 65.51% of identity |
Eggnog | cytoplasmic linker associated protein(ENOG410ZMY0) |
Kegg | Link to kegg annotations (AT2G20190) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429579.1) |
Pfam | CLASP N terminal (PF12348.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |