| Id Trinity | FTRINITY_DN59150_c3_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_254325 |
| Sequence | AGTGGTTATATTACTGGGGAAATTAAGCCTTCGAGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAACATTCATCAAGGGAAGCCTCTCTTTTTGGAG GAGATGGTGATGTCACTGAGAAACCTGTAGACCCCATTAAGGTATATTCAGAAAAGGAGTTAATCAGAGAGGTTGAGAAGATTGCGTCTACCCTTGTACC ACAAAAAGACTGGTCAATTCGTATTGCTGCCATGCAGAGAATTGAAGGTCTCATTCTAGGAGGTGCTGCTGATTATCTGTCTTTCCGTGGACTTCTGAAA CAACTTATTGGACCGTTAAGCACACAATTGTCAGATCGAAGGTCTAGCATTGTCAAGCAGGCTTGCCATTTACTGTGCTTTTTGTCAAAGGAACTCTTGG GTGATTTTGAAGTATGTGCTGAAATGTTTATTCCAGTCCTTTTCAAGCTGGTTGTGATAACTGTGCTTGTAATTGCAGAGTCTTCAGACAACTGCATTAA AACGATGCTGCGCAACTGCAAAGTTGCTCGTGTGCTTCCTCGTATAGCTGATTGTGCAAAAACTGATCGCAATGCAGTACTTCGTGCAAGGTGTTGTGAA TATGCTCTTTTGGTCCTAGAACATTGGCCTGATGCACCTGAAATACACCGGTCGGCTGATTTATATGAGGATATGATAAAGTGTTGTGTCAAAGATGCAA TGAGTGAGGTACGATCTACTGCAAGGATGTGCTACAGAATGTTTGCGAAAACTTGGCCAGAGCGTTCTCGACGCCTATTTCTGTCCTTCGATCCTGTTAT TCAAAGGTTAATAAATGAAGAAGATGGAGGAATACATAGGCGACATGCTTCACCTTCCGTTCGTGATAGAGGTGGAACGATGTCATTACCCAGTCAAGCC GCTGCTACATCTTATTTATCTAGTTATGGAACTTCAGCTATTGTTGCAATGGATAGAAGTTCAACTTTATCATCTGGGACATCTATCTCCTCTGGTGTAC TTCTGTCACAAGCTAAGTCACTTGGAAAGGGTACAGAACGAACTTTGGAAAGTGTTTTACATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCT TAGAGGCCTGAATTTGTCTGATAAGTCCAATTCATCTCATCGACCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCT GCAGTTGTCCCAGCATCTAATCATCCGACTAGCTCTTCAATGACAGAATCAACTCCCTCTGTTGTCAATAAAGGTATTAACCAAAATGGTGGTTTGGGTC TGTCTGACATAATCACCCAAATTCAATCTTCCAAAGATTCTGGCAAGTTATCATATCATAGTGATGTTGGTATCCAGTCTTTATCAGCATTGCCATCATA TTCAAGTAAAAGGGGTACTGAAAGATTACAAGAAAAAAGTTCCATTGACGAAAACAGTGACATTAAGGAGGCTAGGCGATATATGAACCCGGACACCAAT AGGCATTTTATAGATACACCTTACAGAGATGACAACTTCAGGGATTTTCAGAATAATTATGTGCCTAATTTCCAGAGGCCACTACTGAGAAAGAATGTAG CGGGACGTATGTCTGCTGGCAGGAGGAGTTTTGATGATAGCCATTTATCTCTTGTGTCAAATTATGTAGAGGGACCAGCATCTCTTCACGAATCTCTGTG TGAAGGACTTAGTTCAGGTTCTAACTGGTCTGCTAGGGTTGCTGCCTTTAATTATCTCCACTCTTTGTTGCAGCAAGGTCAAAAGGGAACTCAAGAAGTA CTGCAGAATTTTGAGAAGGTCATGAAATTGTTTTTCCAGCACTTAGATGATCCCCACCATAAAATTGCACAGGCTGCTCTTTCCACACTAGCAGATATCA TTCTAGCATGCAGAAAGCCCTTTGAGGGTTATATGGAACGAATGCTGCCCCATGTGTTTTCTCGGTTAATTGACCCCAAAGAGCTTGTTCGGCAGGCATG CTCGGCAACTTTGGAGGTTGTTAGCAAAACATACAGTATAGATTCTCTCTTACCTGCATTGCTACGCTCACTCGATGAACAAAGGTCTCCAAAGGCAAAA TTGGCTGTCATCGAGTTTGCAATTAGCTCCTTTAAGAAGCATGCAATGAATCCAGAAGGTGCTGCTAATATTGGCATCCTGAAATTATGGCTTGTTAAGT TAACCCCATTGGTTCATGACAAAAATACAAAGCTTAAAGAAGCAGCTATTACATGCATTATATCGGTGTACTCTCACTTTGATTCAACTGCAGTTCTGAA TTTTATCCTTAGTTTGTCAGTTGAGGAACAAAATTCTTTGAGACGAGCCCTTAAGCAACGCACACCTCGCATTGAAGTGGAGTTGATGAACTATCTGCAG AACAAGAAAGAGCGGCAACGTAAGTCTTCCTATGATCCATCTGATGTTGTGGGGTCATCTTCTGAAGATGGATATGTCGGCTTTTATAGGAAAAATCATT ACCTTGGAAGGTATTCTGCTGGTTCTCTAGATAGTGATGGTGGAAAGAAGTTGACTTCCCACGATTCAACCATGATTAAAGCCAGTACTGGCCTAGCAGC TTCTGATGAAACTCAGGAGCATTCATATCAGAATCCTGAGATTGATTCTAATAGTGGTATTCTCGATTCAAAAAGTAAAGATCATACTTATACATTCAAC ATGGCTCAAAACTTTGGTTTTGAAACAAGCCAAGTAGGACATGTAGACAATAGTATAAACTTTGAGGGTCTATCATCTCATCTGGATGCTAATGGTCTGA TGTCATTAGAACATATAAATGTTTCTCAAGGCTTTGAAAATGACGAAGAACATCTTTCCGACTGGAACCATAATAATTATTCAGCTGAAGAAGTGACGGT TAACTCCATGACAGACACAGGGCCCAGCATTATTCAAATTCTTCATATGATATGCAGTGGGAGTGATGGAAGCTTTGTTTCAAATAAGAAGACCGCACTT CAACGGCTAGTTGAAGCTTCTATAGCAAATGACCATGCTGTTTGGACCCAGTATTTCAATCAGATTTTGACTGCTATACTTGAGGTGCTGGATGATCCAG ATTCCTCGATTAGAGAGCTTACTCTTTCATTGATAGTTGAAATGCTTAAAAACCAGAAACTTGCCATGGAAAATTCAGTCGAGGTTGTAATTGAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_83283; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_254325
| Blastp | CLIP-associated protein from Arabidopsis with 68.84% of identity |
|---|---|
| Blastx | CLIP-associated protein from Arabidopsis with 69.08% of identity |
| Eggnog | cytoplasmic linker associated protein(ENOG410ZMY0) |
| Kegg | Link to kegg annotations (AT2G20190) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429579.1) |
| Pfam | CLASP N terminal (PF12348.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |