Ll_transcript_256341

• Id Trinity: FTRINITY_DN59168_c0_g1_i3
• Name Transcript: Ll_transcript_256341
• Sequence: GTGGTTTCCCAAGCGGTGCAGTTGGCAGCAGATAGTGGAGGACAGCTGGCCTCCTTGGACGGCTGGATTTGAGTTGGCGCCATATCTGAGGAGTGCATCC ACGGTCCAGATTTGGTCACAACTGTGGAGTTATTAGGAGCAGCTTTTGTGGCAGTAATTATAGGCTTTTGGAACCGTGTAGCAGAGGTGTGCAAAGAATC ACACGACTCATTAAAAACAACAGCATCCAACCGTGGAAATTGAAGTGGGTGCTCTGCACGAGGGAAAGTACTTGAAGATGCATTTGAATTCCGTGAAGGA GTGTTAATACTCCCTTTATGCTCCTTCAAAGTGCCATTTGAAAATTGCTTTCTCTCTCCACTCGGTTCACTCTTAGAGAAAAAAATTTATTCTCTTTGTT TTTCCAACTCAGTGAGCATTTTGGGATTGTGAGTGGAAGAGATGTGCACCAATGTGGTGGCTGGTTGTTCATTACCCTCAAACATGTCCCTTCCCTTCTT CCCAAACAAGCCCTTTTCATTCGTCTCAAACACATGTGGTGGTGTTCTTCTTCCCTTGTTACGGTCATGCTCCAAAGTGGTGGTTGTCGTTTCATGACCC TCCGCTGGATTTAAAAACTCCAGAGGTAGAACAATGTTTTGTTTTCCGGTTGACCATGAAAATGTCGTAACACTGAGACGTGGAAAACCGGATGAATGCG AGAAGATTGTGGAAGATCGAGCTTATAAGCAACAGGTCCAACACCGTGGAGCACAAAAAATGGGCCATAATACAGACGGGCCAACTTTTGAGAGGTACGC CGCTGTACCGACTGTTGACGATACGGTTGGAGGTGGAGCAACACCCATTCTCCCGGTTCAAAGGGTGTCTAGAAGATTGTGGAAGATCGAGCTTATAAGC AACAGGTCCAACACGATGGAGCACAAAAAATGGGCCATAAAACAGACGGGCCAACTTTTGAGAGGTACGCCGCTGTACCGACTGTTGACGATACGGTTGG AGGTGGAGCAACACCCATTCTCCCGGTTCAAAGGGTGTCTAGAACAGAGGGATGTGAAACCGATCCAAGAATGTGGTCTCTTAATGTCGGAGGAGGCCGA CCATACAACTCTTCGAAAGGAGATATTTGTATGGATGAGTGCCGGTTGGTGTTATACCAGTACTCCGCCAAGGGAAGCTGGGTGAACCACTTGGTGGGAT GTGATCCAGTGAAGCAGCGGAAGTATGTCTACAGCCCTCTATTCACAACCTCGGTTTGTCCGTCAGATTGAGGGTGGTAGGCGGTGCTGAAGCACAAGCA AGTACCCAGGAGCTTAAAAAGCTCCTTCCAGAATCCACTGACAAAGATTTTGTCCCTATCCGAGACAATGCTTTTTGGAACACCGTGAAGTTTACAAACT TCATTCAAAAAAGGCGAGCAAGGGTGTCTGCCGAGAAGTGAGTGGGTAGCCCAATGAAGTGAGCATACTTTGTCAGTCTATCCATAACTACCTAGATCAC GGTATGGCCATGTGATGAAGGTATTTGTTATATTGGCAGATGGTACATTGACGAATGAAATCCTTGACTTTCTTAGTCAGTCCGGGCCAATAGCATGATG CAGCTAAACAGGCCACGATTGGTTTCCATCCAGAGTGACCTGCAGTAGGTGTTTCATGAAACTCTTTCAACAATGAGATATGGAAATCGGCAACATCAGG TATAAAGATCCTGTTTTGAAATAACAATAGTCCTTGTGAATATGAAACTGTGCATGACCCTTCTCATATGTTTGAATTGTTGTTTGTCCTTCCGAGGTGG TGTAAAAGTGCCTGATCTTATCCAATAACAACGGAAAGGAGGTGGATAGAGCACAAAAGAGGGTAGGTTAGGGCTTAGCATCAAATCCAATCAATTTTGT GGCCCATTTTTGCTGTTCAGGGGAATGAATTCCTTGGTTCATTAAGTACTTAAGACTTTGTTGATCTGTTAGTATCTGAAATTTCCGACCAACCAAATAC TGACGCCATTTTTTTATAGATTCCGTGACCGCAAACATCTCATGCACATTAGGAGATGCACGTTGCATGCGCGGAGACATCTTTCTACTGAAAAAAGCAA GCGGATGACCTTCTTGGGAGAGGACGACTCCAATGGCAGTAGCTGATGCGTCAGTCTCCACCACAAATAGCTTAGAAAAATCCGATAGATGCAAAACCGA TATGGTAGTCATTGTTGTTTGTAATTTTGTAACGGCCTCCTGAGCCTCTGTGGGCCATGTAAAATTCTGTAACTTAAGCAAATCGGTGAGGGGAGAGGCG TGTGCGGCGTAGTTCTTGACAAATTTCCGATAAAAACCGGTGAGGCCAAAAAAACCCTGAGTGTTGTGTGAGACCGTGGTTGCGGCCAGTGAACCATAGC TTGTATCTTTTCTGGATCAAGTTACACTCCACCATATGGCCTAAGTAAGTAACAGTAGGCACTCCCAAGGTGCATTTAGACAATTTGGCATAAAACTTGT TAGTAACCAATAGGTTCAAAATGGTATCCAAATGCACAACATGGTCATTTAAAGTAGAGCTATATATTAGAATATCATCAAAGAAAAGAAGAACGAACCG GCAAAAATGTGGGTGCAATAGATCATTCATTGCCACTTGAAAAGTGGCCGGGGCATTGGTGAGGCTGAAAGGTATAACCAAGAACTCACAATGACCATCA AAAGTTCGGAAAGAAGTCTTATGAGTATCTTCAGGTTTCATTGGAATCTGATGATAGCCCGATCAAGGATAGATCTTTGAAAAAATTGTTGCGCTCCCTA ATTCATCCAATAATTCATCAATTGTCGTAATTGGGAAGCGGTCACGAACTATGATTGCATTCAGAGCTCAGTAATCCACACAAAACCGCTATGTGCCATC TCTTTTTTACCAATAAAACTGGTGATGAAAATGGGCTAGTACTAGGTGTAATAATTCCATCTTTCAGCATATCTGCAATCATAGTAGTCATGGCTTCTTT TTGGGAATGAGGGTAACGGTAAGGTTTGAGGGAAATTGGGCTAGAGTTAGGTTGTAAGGTGATGGAATGGTCATGAGGGCGGGATGGGGGTAAGCCGTGA GGGCGTTGGAAAATGTCGTTGTATTTGGTGAGGACAGTTTGTATGGGAGGGTGAGTGGTTTTAGGCTGGTCTGTATGAAGTGTGGTTGTTGGTTGTAAGG GTATAAAAATCAATGTGTGGAAAGAAGCCACTGAATCTGTGTGAAGTAGACGAGTTAGTTGGTGTAGTGAGGATTGAGTAATGGGGGTTGTGGTATCCCC TTGGAGAGTAAGAGAATCATTCCCAACCTTAAAGGTCATTGACAGAACAACAAAGTCTGAAATAATAGGTCCCAAGGTGCGCAACCACTCAATTCTCAGT ACTACATTTGCACCTTTAATGGGTAGCAAATAGAAGGGAATATGAAATAATTTGTTTTGAAGAACAATGAGAGTATCAGAGCACAAACCCGTGCAATAAA TGTGAGCTCCATTACCAACCATCACTGGAAATTTTGGTGTCGGAGTTATGTTTAGTTGCAAGTGATGAGCAAGACGTGGTTGTAGAACATTGTGTGAACT GCCTGTGTCGACTAGGACCATAACAGCCTGCCCTACAATGGAACCCGTAAGCCGAAGGGTTTTTTGGGATGGCTGGCCTTCGAGGGCTTGTTTGGACAAT TGAAAATGAATTAGATCCTCTATAGGTTGAACATGTTCAACTTTCACTGGTTCAAGAGAAATCAACAAATCTTCAGAAGTGGCAGATAAGTCATACACTA GAAGGAGTACAAACTGTCGACCTTGGCAGATGTGACCGGTTAGATATTTTTCGTCACAATTATAGCACAAACCTTGAGCTCGTCTTTCTTGCATTTGGGC AGTTGTGAGACGCCTAATAGGCATTATGGAAACTGTGTTACTGTTGCCTACAGATGAAACTGAGTGGGCACGTTGGTTTGGT
• Tissue: flowers
• Gene name: LI_gene_83441;
• Additional information: details;

Expression of Ll_transcript_256341

FPKM

• FPAB: 0.4
• FPNAB: 0.2
• LF1: 0.3
• LF2: 0
• LF3: 0.3
• LF4: 0.1
• UF1: 0.1
• UF2: 0.2
• UF3: 0.1
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_256341

• Blastp: Retrovirus-related Pol polyprotein from transposon 412 from Sophophora with 24.05% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon 17.6 from Sophophora with 41.83% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450597.1)
• Pfam: Retroviral aspartyl protease (PF08284.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;