Ll_transcript_256436

Id TrinityFTRINITY_DN59174_c0_g1_i13
Name TranscriptLl_transcript_256436
SequenceAGATGATCCAGGGTGTTAGGTTTTTGACATGAGGAGAAGCTATCCCAATTCCCAATCCAAAACGCCGCCACTCATCAAAACTAACTAAAACCGCAACTTA CAAAACCCACCACCCTTCTTTTCCAGCTTTTTCATTTCTTCATTTCATTTTCTCTCTCCAAAATACTTTCATAACCCTAATCATCATTCTCCAAACCCTA TCTTCGATTCTCTTCGCTGCTCTCTCTATCGCTTCAGATTTCAACCGAGGTTCGCGATTTCAAGGCTCTGCGTTCGCGATTGGGATTCATGTTTCAAGCT TCTTTCGCCACTCATAAGAGATATTCGATTACAATATGAATCGGTGTCAGAAGCTATCTGATTAAGTTGATTGCATAAGGATATTCAACAAATCTACTTG CTTCGTTCGATTCCGTTCAAGACACACATCTGAAACCCTAATTTTGGTTTCTATTTGGGGAAGGATTCGAAGCTTCGTGTTCTAAAGGAATCTGAATTCT CTGATGCGCTAGGGTTCTGTGTGACGAAGTTGAAGACTTGAAGAATTCTGGGAGTGTTCTCATCGTTGTGGCGGTTTATTTTGTTCGATCTTATCTTTAG AAAAAAATATTAGAAAAAGAGAAGACAAAAAAAGATCTTTTCATACAGTGTACTGTTTGATTTGTTTGAAGTTTTAATATTTTTGAGGCCTTTTATTTCA TTATATTTCAATTTCAAAGGCACTGTTCAGTATTGTGTTTTCGTTCTATTGCTTCGGTGTTTATCTTTTTTCTTATAGATAAAAGAAAAGAGAAAATATA CCACCATGGCCGTGTATTATAAATTTAAGAGTGCAAGAGATTATGATTCAATTCCCATGGATGGTCCTTTCATCTCTGTTGGTACTTTGAAAGAAAAAAT ATTTGAAACGAAGCATTTAGGGAGAGGTACTGATTTCGACCTCGTGGTCACCAATGCCCAAACCAATGAAGAATATCTTGATGAGTCAATGCTGATACCA AAAAATACCTCAGTGTTAGTTGGTCGGGTTCCCGGACGGCCACGTTTACCAATTGTCACTGAAATAGTGTACTATCTCAAACCTTTAATGCAATCACTGT TGTTTGAATTTTCACTATTAATCATGCATTTTGTATGTAAACTCTTTAATAATGGGCAGTCATCAATTTGTCATTCTCGTTTCTATTCTCCACACCATAG TTGCACAATCTTTCCCCGACACTACATTCTTCAACTGTGAGATATATTCTGTGTACTTGAGTTGCAGCTGTCTTTTGTTTTCTGCAGGCAAAAGCTGGAA AATAAGATGGCAGAAACTGAACCTGATAACAGTAGCTTACCAGTTGCTAATACATCTGCCATGAAATATACTGAAGATATGGATTGGGATGAATTTGGCA ACGATTTATATTCAAATCTGGATGCACTGCCTGTCCAATCAAGCAACTTCATTCCGGAGGCTCCTCCGACTAACAATGCTGATGAGGACCTAGATAGTAA GATTAAGGCCGTAGTTGATACTCCAGCCTTGGATTGGCAACGTCAAGGGTCAGATTTTGGTGGTGGTAGAGGTTTTGGAAGGGGTATGGGAGGAAGGATG GGAGGTGGGCGTGGTTTCGGGTTGGAGCGGAAGACACCTCCACAAGGCTATGTGTGTCATAGATGCAAGGTGTCTGGACATTTCATTCAGCACTGCCCTA CAAACGGGGATCCAAATTTTGACGTCAAAAAAGTCAAGCAACCTACTGGTATTCCGCGATCGATGCTGATGGTTAACCCACAAGGTTCATATGCATTGCC AAATGGCTCAGTAGCTGTCCTGAAGCCAAATGAGGCTGCTTTTGAGAAAGAAATAGAAGGGCTACCAACATCAACACGTTCTGTGGGGGATCTACCTCCT GAGCTCCACTGCCCCTTGTGCAGTGATGTGATGAAAGATGCTGTGCTAACAAGCAAGTGTTGTTTTAAAAGCTTCTGTGACAAATGTATTAGGGACTACA TAATGTCAAGGTCCATGTGCATATGTGGTGCCACAAATATTCTTGCCGATGATCTTCTGCCAAATAAGACATTAAGAGACACTATTAATCGTATATTGGA GGCAGGCAACAGCAGTGCTGAAAATGTGGGGAGCACTTTTCAAGTTCAAGATATGGAGTCTGCTCGCTGTCCACAGCCTAAGATTCCATCTCCAACCTCG TCGGCTGCATCAAAGGGAGAACTAAAGGTTTTACCCATTCATGAAGAAACAACAAATATACAAGAAACAGCTGATGATAATAAGGCTGTTACTGCTCAAC ATCAGACATCAGAGCAAGTAAGGATCACCAGAGCTGCTGATGTATCTGAAGCTACTCATGAGTCAGTGAGTGTAAAGGAGCAACCATCACAAGGGAGTGC TCGACCGGTTGAAGAAGAAGTGCAGCAAAACTTGGTTCCTACTGAGGCAGGAAAGAAAAAGAAGAAGAAGAAAATTCGTTTACCCACAAATGAAATGCAG TGGAAAAACCCACATGACTTTCCAGCTGAGAACTATATGATGCCAATGGGCCCACCTGCTGGGTATAATCCGTACTGGAATGGCATGCAACCTTGTATGG ATGGATTTATGGCACCATATGCTGGGCCAATGCAAATGATGGGTTATGGTCTTGGCCCCTTGGACATGGCATTTGCAAATGGTTTTCCACCAGACCCGTT TGGCATGCAGGGTTACATGATGCCTCCTGTTCCACCTCATAGGGATCTTGCTGAGTTCAGTATGGGGATGAATGCTCAACCTCCAGCTATGAGTAGAGAG CAGTTTGAAGCCCGGAAAGCTGATTTGCGGAGGAGGCGTGAAAATGAGAGACAGGGTGGAAGGGACTTCTCCAAAGACAGAGAGTTTGTTGCTAGGGAAG TGAGCAGTGTTGGGAATGGTTCTTCAATGAAATCAAAAACCAAGTCAGCAATTCCAGCACCGTCGTCGAATAGCGACTACCATTCTCAGCGTCACCGTTC AGAACGGTTATCACCAGATAGATCTCGTTCTCCGATCAAAGTTGAACCT BLAST
Tissueflowers
Gene nameLI_gene_83510; 
Additional informationdetails; 

Expression of Ll_transcript_256436

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_256436
BlastpE3 ubiquitin ligase PQT3-like from Arabidopsis with 52.07% of identity
BlastxE3 ubiquitin ligase PQT3-like from Arabidopsis with 50% of identity
EggnogRetinoblastoma binding protein 6(COG5222)
KeggLink to kegg annotations (AT5G47430)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019432666.1)
PfamZinc knuckle (PF13696.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;