Ll_transcript_256448

Id TrinityFTRINITY_DN59174_c0_g1_i25
Name TranscriptLl_transcript_256448
SequenceCGTGAAACGGAAGTTACGAAAGCCACTAACCACGCATTTCTTAACCTAATTATCATTATCATCATTCTCATCCATTCTTCACACTCGATCTTCGAATCTT CGATTCTCTCTATTTCGCTTCAGATTTCAATCCATGCTTCTCGATTTCAAGGCTCGCTCGTCGTCTCAGTGTTCGTGATTCTCTCTCAAGCTTCAATCGC TGCCGATCTGAGATCTTCGTTTCCCATTTTAATCGGAAACCGTTGGCTTCAGATTAAGTTGATTACTCAAGGAACAAAGAAACCTCTTTTCGTTCGATTC TGTTGCAGACAAACCTCTGGAACCCTAATTTTGGTTTCTATTTGGGGAAGGATTCACTATTACTGGATTCGCTCGATTGTGGTTACGTCGATCGTTTTCT GATCTGAAGGAATCTGAATTATCTGGATTTTATGCGCTAGGGTTCTGTGTTGACGAAGATGAAGACTTGAAGAATTCTAGGAGGGTTCTCATCGTCGTGG TGGTTCGCTATGTTCGATCTTATCCTTAGAAAAAATTAGAAAAGAGAAAAGCGAAAAAAAGAAGATCTTTCACTATATTGTACTGTTTGATTTTTTTTGG AGTTTTAATATTTCAAAGGCCTTTTATTTCGTTATATTGGAATTTCAAAGGCCCTTTTTGTTATTCCGTTCTTGTTATATTACTTTGGTGTTGATCTTTT TTCCTATAGATAGGAGAAAAGAGAAATATACCATCATGGCGGTGTATTATAAATTTAAGAGTGCAAGAGATTATGATTCAATTCCCATGGATGGTCCTTT CATCTCTGTTGGTACTTTGAAAGAAAAAATATTTGAAACCAAGCATTTAGGGAGAGGTACCGATTTCGATCTTGTCGTCACCAATGCCCAAACCAATGAA GGTTGGTTCTGATTTTTGATTAATTAAGCTATTCCCTTAAAAAGTAGTGGGTTGGGGCGTTAATATGGGTCTGGGTTTTTTTATAGCATTTCAATTCGGC ACTAAACCATAAATTTAATAGTAAGGACGTTATACATAGTGCTGATGAGGGGAATTCATGGTTAAACTTACAGTGTTTGTCATGTACTTCACTAAGCACA ACTTTTTACTGGTGCTATCTGCCATTGAACTGAAATAGGCTTCATTCAAAATTTATCATCCACAACTTCATAAAACGTTCCTCTGATGTTAGTTTGATTA AAGTAACAAGTCCTTGGATTATTTTAGTGAGTTGAGCATCTATCTGTGGTTTTATTAACCCAAGGACAAGGATAAATATAGCTTTCCTTGCTCACTTTAT AGATATAAACTTGCATAGGCGGAGTCTTATCTCACAACCATATACAAAATAAAATAAAATACTCTCAACAATTATTTGTTGGAATTACAGGCAGCAAACT TATTTTTTTGTCTTACCAGTTCATATATACTTGGCTTCATGAATAGCATTGTTGCACTGTTTATAGTTGCTGTCTCTTTGGAATTTCAGAATATCTTGAT GAAGCTATGTTGATACCAAAAAATACCTCTGTGTTAGTTGGTCGGGTTCCAGGACGGCCACGTTTACCAATAGTCACCAAAATAGAGCAAAAGCTGGAAA ATAAGACGGCAGAAACTGAACCTGATAACAGTAGCTTACCAGTTACCAATACATCTGCCATGGGATATACTGAAGATATTTATGAGGACGAGTTTGGCAA CGATTTGTATCCAGATCCGGATGCACAGCCTGTCCAATCAAGCCACTTTGGCCTGGAGGCTCCTCTGACTAACAATGCTGATGAAGATCTAGACAGTAAG ATTAAGGCCGTAGTGGATACTCCAGCCTTGGATTGGCAACGTCAAGATTTTGGTGGCGGTAGAGGTTTTGGAAGGGGTATGGGAGGAAGGATGGGAGGTG GGCGTGGTTTCGGGTTGGAGCGGAAGACACCTCCACAAGGCTATGTGTGTCATAGATGCAAGGTGTCTGGACATTTCATTCAGCACTGCCCTACAAACGG GGATCCAAATTTTGACGTCAAAAAAGTCAAGCAACCTACTGGTATTCCGCGATCGATGCTGATGGTTAACCCACAAGGTTCATATGCATTGCCAAATGGC TCAGTAGCTGTCCTGAAGCCAAATGAGGCTGCTTTTGAGAAAGAAATAGAAGGGCTACCAACATCAACACGTTCTGTGGGGGATCTACCTCCTGAGCTCC ACTGCCCCTTGTGCAGTGATGTGATGAAAGATGCTGTGCTAACAAGCAAGTGTTGTTTTAAAAGCTTCTGTGACAAATGTATTAGGGACTACATAATGTC AAGGTCCATGTGCATATGTGGTGCCACAAATATTCTTGCCGATGATCTTCTGCCAAATAAGACATTAAGAGACACTATTAATCGTATATTGGAGGCAGGC AACAGCAGTGCTGAAAATGTGGGGAGCACTTTTCAAGTTCAAGATATGGAGTCTGCTCGCTGTCCACAGCCTAAGATTCCATCTCCAACCTCGTCGGCTG CATCAAAGGGAGAACTAAAGGTTTTACCCATTCATGAAGAAACAACAAATATACAAGAAACAGCTGATGATAATAAGGCTGTTACTGCTCAACATCAGAC ATCAGAGCAAGTAAGGATCACCAGAGCTGCTGATGTATCTGAAGCTACTCATGAGTCAGTGAGTGTAAAGGAGCAACCATCACAAGGGAGTGCTCGACCG GTTGAAGAAGAAGTGCAGCAAAACTTGGTTCCTACTGAGGCAGGAAAGAAAAAGAAGAAGAAGAAAATTCGTTTACCCACAAATGAAATGCAGTGGAAAA ACCCACATGACTTTCCAGCTGAGAACTATATGATGCCAATGGGCCCACCTGCTGGGTATAATCCGTACTGGAATGGCATGCAACCTTGTATGGATGGATT TATGGCACCATATGCTGGGCCAATGCAAATGATGGGTTATGGTCTTGGCCCCTTGGACATGGCATTTGCAAATGGTTTTCCACCAGACCCGTTTGGCATG CAGGGTTACATGATGCCTCCTGTTCCACCTCATAGGGATCTTGCTGAGTTCAGTATGGGGATGAATGCTCAACCTCCAGCTATGAGTAGAGAGCAGTTTG AAGCCCGGAAAGCTGATTTGCGGAGGAGGCGTGAAAATGAGAGACAGGGTGGAAGGGACTTCTCCAAAGACAGAGAGTTTGTTGCTAGGGAAGTGAGCAG TGTTGGGAATGGTTCTTCAATGAAATCAAAAACCAAGTCAGCAATTCCAGCACCGTCGTCGAATAGCGACTACCATTCTCAGCGTCACCGTTCAGAACGG TTATCACCAGATAGATCTCGTTCTCCGATCAAAGTTGAACCT BLAST
Tissueflowers
Gene nameLI_gene_83510; 
Additional informationdetails; 

Expression of Ll_transcript_256448

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_256448
BlastpE3 ubiquitin ligase PQT3-like from Arabidopsis with 52.2% of identity
BlastxE3 ubiquitin ligase PQT3-like from Arabidopsis with 51.09% of identity
EggnogRetinoblastoma binding protein 6(COG5222)
KeggLink to kegg annotations (AT5G47430)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019432666.1)
PfamZinc knuckle (PF13696.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;