Ll_transcript_256453

Id TrinityFTRINITY_DN59174_c0_g1_i30
Name TranscriptLl_transcript_256453
SequenceAGCCATTCAAAAACAGAGTAGAAGAAAGCAACTAAAATCTCTATAACTTACAAAACCCACCACGCTTTTTTTCTAGGTTTTCTTTCTCTTCAATTCTCCA TTTCCTCTTCTCTCTCTCACAAAATTTTCACAACCCTAAACCTAATCATCGTCATCATTCTTTACACGCCATCTTCGATTTTCTATGCTGCTCTATCTAT TGCTTCAGATTTCAATCCAAGCTTCTTGATTTCAAGGTTTGCTCGTTGTTCTCACTGTTCGTCGTTCTCACAAGCTTTAATCGCCGCTGATCAGAGATCT TCGCTTTGAATTCGAATTGGAAACTTCAGGCATCGGATTGAGTTTATTATTGAAGGAACAAAACAAATCTATTTGATCGTTCGATTCTGTTGCGGATACA CTCCTCTGAAACCCTAATTTTGGTTTCTAATTGGGGAAGGATTAGGATTCACAAGTTCTGGATTCGCTTGACTTTTTCCTCACGCGGATTGTGTTTTATC TGAAGGAATCTGAATTCTATGGATTTTCGATGCGCTAGGGGTATGTGCTGATCAAGACGAAGATTTGGAGAATTTTAGGAGTGCTCCCAGCTTCGTGGTG GTTGGCTTTGTTCCATCTTATCCTTAGAAAAAAAATTAGAAAAGAGAAAAGTGAAAAAAAATCTTCGATATATTGTACTGTTTGATTGTTTCGAGTTTTA ATATTTCAAAGGCCTATTGTTTTATTAAATTTCAATTTCAAAGGCCCTTTTGATTATTTTTGTTCTTGTTATATTGCTTTGGTGTTGATCTTTTTTCTTA TAGATAAGAGAAAAGAGAAATATACCACCATGGCGGTGTATTATAAATTTAAGAGTGCAAGAGACTATGATTCAATTTCCATGGATGGCCCTTTCATCTC TGTTGGTACTTTGAAAGAAAAAATATTTGAAAACAAGCATTTAGGGAGAGGTACTGATTTCGACCTCGTCGTCATCAATGCCCAAACCAATGAAGAATAT CTTGATGAAGCAATGCTGATACCTAAAAATACCTCAGTGTTAGTTGGTCGGGTTCCAGGACGGCCACGTCTGCCAATTGTCACTGAAATACAGCAAAAGC TTGAAAGTAAGACGTCAGAAACTGAACCTGATAACAATAGATTACCAGTTGCTAATGCATCTACTATGAAATATACTGAGGATACGGATTGGGATGAGTT TGGCAATGATTTGTATTCAAATCCTGATGCACTGCCTGTCCAATCAAGCAACTTTATTCCGGAGGCTCTTCTGACTAGTAATGCCGATGAAGACCTAGAC AGTAAGATTAAGGCTGTGGTTGATACTCCAGCGCTGGATTGGCAACGTCAAGGATCAGATTTTGGCGGTGGTAGAAGTTTTGGAAGGGGTATGGGAGGAC GGATGGTGGCTGGGCGTGGTTTCGGGTTGGAGCAGAAGACACCTCCACAAGGCTATGTGTGTCATAGATGCAAGTTGCCTGGACATTTTATTCAACACTG CCCTACAAATGGCGATTCAAATTTCGACATCAAAAGAGTCAAGCAACCTACTGGTATTCCGCGATCGATGCTGATGGTTAACCCACAAGGTTCATATGCA TTGCCAAATGGCTCAGTAGCTGTCCTGAAGCCAAATGAGGCTGCTTTTGAGAAAGAAATGGAAGGGATGCCAACATCAACACGTTCTATGGGGGATCTAC CTCCTGAGCTCCACTGCCCCTTGTGCAGTGATGTGATGAAAGATGCCGTGCTGACAAGCAAATGTTGTTTTAAAAGCTTCTGTGACAAATGTATTAGGGA CTACATAATCTCAAGGTCCATGTGCATATGTGGTGCAACAAATATTCTTGCTGATGATCTTCTGCCAAATAAGACACTGAGAGACACTATTAATCGTATA TTGGAGTCAGGCAATAGCAGTGCTGAAAATGCTGGGAGCACTTTTCAAGTTCAAGATATGGAATCTGCTCGCTGTCCACAGCCTAAGATACCATCTCCAA CCTCATCAGCTGCATCCAAGGGAGAACTAAAGGTTTTACCTGTTAATGAAGGAACAGCAAATATACAGGAAATAGCTGATAATAGGAAGGCTGTTTCTGC TCCACAACAGAGATCCGGGCAAGTAAGGATCTCTGGGGCTGCTGATGTATCTGAAGCTACTCACGAGTCAATGAGTGTAAAGGAACAAACATCACAAGGG AGTGCTCGACGGGTTGAGGAAGAGGTGCAGCAAAACTTGGTTCCTACTGAGGCAGGGAAGAAAAAGAAGAAGAAGAAAATCCGTTTGCCCACAAACGATT TGCAGTGGAAAAACCCACACGACTTGGCAGTTGAGAACTATATGATGCCAATGGGCCCCCCTGCTGGGTATAATTCATACTGGAATGGCATGCAACCTTG TATGGATGGATTTATGGCACCATATGCTGGTCCAATGCAAATGATGGGTTATGGTCTTGGCCCCTTGGACATGCCATTTCCAAATGGTTTTCCACCAGGC CCCTTTGGCATGCAGGGTTACATGATGCCTCATGTTCCACCTCATAGGTACGTGATAGTATTTTTGGGAAAACAAGAAGTTTGCTCTTTCACCTGCTATC CTCATGCTCATGCACACAAAGGTGCCTGGTGTATTTTTTTCTTACTGGTCTGCTTTGGGAGGGGTTTGAGGGCTGTAGATTGTATATTTGTAGTGAAGTA GGTTGTTGTATGTATATCAGATTGTATATGTTCATACGTTGTGCATTCAGGTCTGTTTGCGAGTTAGTTTTTGAAGGGGAAGAAAGGGAAGGTTTGAGAG CTATCTCACAAGTGTATTTTATAGTTCCCAAACCTTTCCCTTACCAACCGCACCCTGCATAAACCAACTATCAAATATACCCTTAGAGAGCCAAATTGGA ATATAATTTTTTTGATATGTTTAGGGATCTTGCTGAGTTCGGTATGGGGATGAATGCTCAACCTCCAGCTATGAGTAGAGAGCA BLAST
Tissueflowers
Gene nameLI_gene_83510; 
Additional informationdetails; 

Expression of Ll_transcript_256453

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_256453
BlastpE3 ubiquitin ligase PQT3-like from Arabidopsis with 57.14% of identity
BlastxE3 ubiquitin ligase PQT3-like from Arabidopsis with 56.51% of identity
EggnogRetinoblastoma binding protein 6(COG5222)
KeggLink to kegg annotations (AT5G47430)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019421622.1)
PfamDWNN domain (PF08783.10)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;