Id Trinity | FTRINITY_DN59190_c2_g1_i1 |
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Name Transcript | Ll_transcript_254379 |
Sequence | CGATGATACATTAATTTTTTCAAACCATATATGCAACAAATTAATTTTTCATTTCTTTTCATTCTCATTTCAACTCAAACCCTAACTCCTCCATTTTCCT CCCCCAATTCAATCCCCAGGGTTCCGAATTCTGATTTTTTGGGTTCCGTTTCTTACAATTCAGGAGCGCGAAGAAGAACAACTTCCATTTTGCTAAAATG AGTGCTCCGAAAAAGAGACCTTTTCAGATTGAAGCGTTCAAGCACCGCGCTGTGGTTGATCCTAAGTACGCTGAGAAAACGTGGAAGGTTCTGGAACACG CGATTCATGAAATTTATAATCACAATGCTAGTGGTCTTAGCTTTGAAGAACTTTATAGGAATGCTTATAATATGGTGCTACACAAATTCGGAGACAAACT TTACTCAGGACTTGTGATGACCATGACTTCCCATCTAAGAGAAATTTCTCAGTCAATTGAATCTGCTCAAGGAGAAATTTTCTTGGAAGAGCTCAACAGG AAGTGGGCAGATCATAACAAGGCATTGCAAATGATCCGAGACATACTGATGTACATGGATAGAACTTTCGTACCGAGCAACAATAGAACTCCTGTTCATG AGCTTGGATTGAATCTTTGGAGAGATGTTGTGATCCACTCCAGCAAAACACAGGTCAGGCTTCAAGATACGCTTCTTGAGCTTGTGTTTAGAGAAAGGAA CGGTGAGGTGATAAACAGGGGTTTGATGAGAAATGTAGTAAAGATGCTAATGGATCTGGGCTTGTCTGTATACCAGGAAGACTTTGAGAAGCGTTTTCTT TTTGTTTCAGCAAATTTTTACTGTCTTGAGTCCCAAAAGTTCATTGAGTCTTGTGATTGTGGGGATTATCTAATGAAGGCTGAGAAACGTTTAAATGAAG AAATGGAGAGAGTATCTCACTACTTGGATCCTAGAAGCGAGTCTAAGATAACTCGTGTTGTGGAGAAGGAGATGATTGAAAGTCATATGCACACTCTAGT TCATATGGAAAAATCAGGTCTAGTTATTATGCTTCTGAATGACAAATATGAGGACTTGGGAAGAATGTATAACTTGTTTCACCGGGTGCCTGAAGGGCTT ACAATTGTTAAAGAGGTCATGACTAGTTTTATACGAGAAACTGGTAAGCAGCTAATTATGGATCCTGATAGGTTGAAAGATCCTGTGGATTTTGTGCAGC GTCTCTTGAATTTGAAGGATAAATATGACAAGGTTATTACCTTGGCGTTTAACAATGACAAGACATTTCAGAATGCCTTGAATTCTTCTTTTGAATATTT CATCAATTTGAATGCTCGGTCACCAGAGTTCATTTCTTTGTTTGTGGATGACAAGCTTCGCAGAGGGTTGAAAGGGGTTGGTGAAGAGGATGTGGAGGTT GTACTAGACAAAGTCATGATGCTTTTCCGGTACCTACAAGAGAAGGATGTGTTTGAGAAGTATTACAAGCAGCACTTAGCAAAAAGGCTTCTTTCAGGGA AAACTATATCTGATGACGCAGAAAGAAGTTTGATTGTTAAGCTCAAAACAGAGTGTGGATATCAATTCACTTCTAAGTTAGAGGGTATGTTTACTGACAT GAAGACTTCCCATGACACGATGCAGGGTTTCTATGCATCTCTTGGTGCTGAGTTCGGGGATAACCCTACACTAGTTGTCCAGGTGCTTACAACGGGTTCA TGGCCAACTCAATCTAGCCCTCAGTGTAATCTTCCATCCGACATCATAGGCGTATGTGATAGGTTCAAGTCATATTATCTTGGCACCCACAACGGTAGGA GATTATCCTGGCAAACAAGTATGGGGACAGCTGATTTAAAAGCAACATTTGGTAACGGCCAGAAGCATGAGCTGAATGTATCCACATACCAGATGTGTGT ACTCATGCTTTTCAACAACGCTGATCGATTGACTTGTAAGGAGATAGAACAGGCCACATCTATACCAATTTCAGAGTTGAAGAGGTGCCTTCAATCTCTC GCCTGTGTCAAAGGAAAGAATGTTCTTCGGAAAGAGCCTATGAGTAAGGACATATCTGACGATGATGCATTTTTCTTCAATGACAAATTCACAAGCAAGT TCTTCAAGGTAAAGATAGGAACTGTTGTTGCACAGAGGGAGTCTGAACCGGAAAATATAGAAACTCGGCAGAGAGTGGAAGAAGACAGAAAGCCACAGAT TGAGGCAGCAATTGTGAGGATAATGAAATCTAGGAAGACTCTAGAACATAATAATGTCATTGCTGAGGTCACAAAGCAGCTGCAGCCAAGATTTTTGGCT AACCCTGTTGTTATTAAAAAACGGATCGAATCCCTTATTGAACGTGAGTTTCTGGAGAGGGATAAAGTGGACAGAAAACTGTATCGCTATCTTGCTTGAA CATGGTATGTTTTTTTTGAACTTGCACTCCAAAATCATTTTGGCTTTGGACCTATGTGATTCAAATTCTGTTAGAAGTTGTAATGCTCATTACAAAATTG TAGCAAGTAGTGCATCTCCCCTTTTGCATATTCAACAAAAATACAAGCCTGCTAGAGTCACTTCTTTAAGGCTGCATAACACAATATCTTTTTAGCTTCT TACATTTGAAAACATTATACTTAATCATTTTGGATGTGGTTAGACTTGCTTTATTTATTCTAATTTGGTAAATGTAAATGGAAAGAAATTATAGTTTTGT AGGTTATTGAACGGTTTGATTACAAAATTCATATTTAGGGGATGAGAATTTTGTTTCATAGCAAAATGATTTGCAAAATACCCCAGATGAAAATAATCTA TTGTGCTGCCTTGCCAGCATAGTAATATATTTTATTGTAATGCTATTGCTATATAACTTGCTAATTAATTCTATATCCTCATTGATATTATCTTCAAAGC AATTTTAAATATTTTAAAAATACTAAATGCATAAAGTTTTC BLAST |
Tissue | flowers |
Gene name | LI_gene_83676; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_254379
Blastp | Cullin-3A from Arabidopsis with 77.63% of identity |
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Blastx | Cullin-3A from Arabidopsis with 77.63% of identity |
Eggnog | cullin 1(COG5647) |
Kegg | Link to kegg annotations (AT1G26830) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428399.1) |
Pfam | Cullin family (PF00888.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |