| Id Trinity | FTRINITY_DN59193_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_255917 |
| Sequence | TGAAAGATTTGGGTTATCTTCTGTGTTTTCTGCAAGTAAAAAGAGGAAAAAGGCATACAATGGAAATAAGAAGAGCAAAAAGGGTAGAAAGGGAATTGAC AGCTCTCTCGACTGTGGTTCTGGTCCTCTTGCAAAAGTAGGTTGGTTTAGGATTATTCTAGATGAAGCTCAAACAATCAAGAATCATAGAACTCAGGTGG CTAGAGCTTGCTGCAGCCTTAGGGCCAAAAGAAGGTGGTGCTTATCTGGAACACCTATCCAAAATACTATTGATGATCTGTATAGCTACTTTAGGTTCCT AAGGTATGACCCTTATGCTGTATATAAATCATTCTACAATACAATTAAAGTTCCAATATCCAGAAATTCTATCCACGGTTATAAGAAGCTTCAAGCAGTC TTGAGGGCCATAATGCTGCGTCGTACAAAAGGTAATTTTTCGTTCTCTAAGAATGTATTTGCTGATTTCCTGACCGGATAGATTGTATGCATTTACTTTT TTCCTGGCTTGGCATAGGTTCAGTGCCCCTTTAATATTCTCGCTGATCTCTTCTCAGGATTGTCATTTAAATTATCTTTTGTAATTTCTTTTCATTTCTT GTCCAACCTTTGTTAGTACCGCTCCAGTATCAGCAAGAGGAACCTTCTGAAGCCAAAGTGCCTACCCAACCACATAAATTTTTCTCTATTTTTTGGCTAA TTTTTCATATCCTTTTTAATGATGGAGTTATTCCTCCAATTCAATGAACCCATGCTTTAATTCTTTTACCATACACACAATATTTGCTTGGTTGAGGGAT TGGACGGAACATTTCAGCCTTTAAGGTTTTCATTTGTTTACTGGAGCTAGAGTTTCCTTGAAACTGAAGTTGGAGTCAAATATACTGCACGGGATAAGTA TGTGTTTTGCTTGTTTTATAATATCAATTTTACACTTGTGCATTTGTTTAGGAACTTTGATCGATGGGCAGCCAATTATCAATTTGCCCCCTAAAACAAT TGAGCTGACTAAGGTGGATTTCTCTGGGGAGGAGCGGGCCTTCTACACCAAGTTGGAAGCAGATTCACGTTCTCAATTTAAGGCATATGCTGCTGCTGGC ACAGTGAATCAGAACTATGCAAATATTCTTTTAATGCTTCTACGACTCCGTCAGGCTTGTGATCATCCACTTCTTGTCAAAGATTATAATTCCAATCCTG TTGGACAGGATTCTATTGAAATGGCAAAAAGGCTTCCAAGGGATTTTCTGATTAATCTATATAAGGAATTGGATACAACCTCTGCTATCTGCCATGTTTG CAATGATCCACCTGAAGACCCTGTTATTACTATGTGTAGTCATGTCTTCTGTTATCAATGTGTATCAGACTTTTTGACAGCTGATAATACATGCCCCGCA GTTTATTGTAAAGAGACAATTGGTGAAGATGTTGTTTTCTCCAAAACTACTTTGAGAAGCTGCATCTCTGATGATCTTGATGGCAGCGGTTCCTCAAATT CACACCACGTTGATTATTCACTATTTCAGGATACTGAGTACAACTCATCTAAAATCAAAGCTGTCCTTGAGATTCTGCAGTCAAATCGCAAAATGAAGGC TCCAAGTTCTGGCTCACCGAATTCCTCTGGAGGCCATGGGGATTTACCGTCTGATGATATTTCATTTATTGAAGATTGCGATTCAGATGTCCGGGTTACA AAGCGCACAAGAAAATATTCAGAGCCCATCACTGAAGGAGCAATAAAGGCTATAATTTTTTCCCAATGGACTAGTATGTTGGACTTACTCGAGGATGCGT TGAAGCAATCTCGAACTCGTATACGATACAGGAGACTTGATGGTAGGATGACTCTACTTGCAAGGGACAAAGCTGTTAAGGATTTCAATACTGATCCTGA GGTAACTGTTATGCTGATGTCACTAAAAGCAGGCAACCTTGGGTTGAATATGGTTGCAGCATGCCATGTTATTCTTTTGGATCTTTGGTGGAATCCAACG ACTGAGGATCAAGCTGTTGATCGGGCTCATAGAATTGGACAGACTCGTCCTGTTACTGTCACACGACTCACTATAAAAGATACAGTTGAAGATAGAATAC TGGCTCTTCAGAGTATTGTTATTATTCACATGTTAAAAGGAGATGTCTGACCTGCCACAACGGATTTATGGGATCAACTCAATTACTATTGTGGTCCAAG GAGAAGTTGATATCATAAAATCCCATGTAAGTTTAGGTTGTGTGGGTTCTTTCTTCCAAAAGATAGAGGGGAAGCTAGCACATGGAAGTGATATTTTTGT GGTTAGGTTTAGTAAGCTTTGATATATGGGGTTAAAGTTTGCTTGCATGGAGAGTAGATAGCATAGGATGCATGTGACATATTTGTAGAGGAATGTTAAA TGTGTGATGATGATGTTGTGTTGGACCATGTGATTGCAGGAAGAAAAGAGAAAGATGGTTGCATCTGCCTTTGGTGAAGATCATGCCGGTGGTACTGCTA CCCGCCTGACAGTGGATGATCTCAAATATCTTTTTATGGTCTAGAAAGATTGCTGATTACTATCATGATGGTCTCTTCAAGTTTTGTTGTAGACCGGTTT TGGTATATGGAGTTAGGGTGATTCTTCACTCAAAGGGTGCCTGCTCACATGTGCTGCTCAAGTTGGCTGGTTGATTCAAGTTGTAACATCCATTTTGAAG CCCACCAAGGTCATTTTTGTCCTCCAGAACATCAGTTCTATGCTATGTAGCACAGTAGCAGCATAAAGTTTCCTGTAATGGTAATGTTGCTTGTCGTATG GCGTGGAGGTTATAAGTTCATATCTCGGCAAAAGCTTCTTCACATGTGAGAGTAAGGTCATGTATATCTACCCTCCCCAGACCTTGACCATACTAGGTGG GAGCAGTGGGCTGGGCTGCCCTCGACATATATATCGATTATGAATATACTACCTTATGCTAGATTAGCTATCCTTTTTTTCTTATTTACCATCTAACCAT CATAGACCACTGGGCATTGTAAGCAAAGGTGGAAGGATATCTGGTTATCTCGGGGGCCATAACCTTGAAGGGCATGGACCTAGCTACCCAGCTCCCATGT GTATGTTCTGCTCTAGGTCCAGTGAAATTTTGACCAAGTCAATGTGTATTCATGTTTTATAAATGAATATATTTCTATATTTAAATTAATGTTACATGGA AGCAATCATGTGTGGTAGATAGGTGATATCTTGAGCAAAGTTATTGGATTTGATTCTTGATTTGTGCATAGAAAAGACATTGTACATAAACCTTATTTTA GTGATTTCATG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_83702; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_255917
| Blastp | Helicase-like transcription factor CHR28 from Arabidopsis with 64.96% of identity |
|---|---|
| Blastx | Helicase-like transcription factor CHR28 from Arabidopsis with 61.34% of identity |
| Eggnog | Transcription termination factor, RNA polymerase II(ENOG410XPDU) |
| Kegg | Link to kegg annotations (AT1G50410) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441655.1) |
| Pfam | Zinc finger, C3HC4 type (RING finger) (PF13920.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |