| Id Trinity | FTRINITY_DN59201_c1_g2_i9 |
|---|---|
| Name Transcript | Ll_transcript_16364 |
| Sequence | GTTCACACGAAAAGGGTGTCACACTCGTGCGAGATTTGGGTCATTCTTCTTCTTCTTCTTCCTCTTCCGCTCACTCTTATGTTATGCAAAGCAAAAGTTC AAATGAGATGGCATCTGCTCAAAATGTTGAGTTGGAGGCAGCAAAGTTTCTGCATAAACTCATTCAGGATTCGAAAGATGAGCCGGCTAAGTTGGCTACT AAACTCTATGTGATACTACAACATATGAAATCAAGCGGGAAGGAACATTCAATGCCATATCAAGTTATATCAAGGGCAATGGAGACCGTCATCAACCAGC ATGGTCTTGATATTGAAGCATTGAAGTCATCACGTCTTCCTTTGGCTGGTGGTCCTCAAATAGGATCTTCTTCACAGGCGGTGGGTGTTCCAAAGGACTC GCAAGTGGTCTTGGCTGAAAATGAGATGTCCAAATTCGACTCTTTGGCCTCTGGCAGGCCACCAGTTGCCCCAAGTGGTGGAGCACCTGATTATTATCAA GGATCTGTGGCTCAGAGGAGTAGCCAGTCTTTTGATCAAGGGAGTCCATCTAGTTTGGACTCTAAGTCTGCTAACTCGCAGTCACAAGACAGGCGTGATA CTGCCAACTGGGACAAACAGGTGAATCTGAAGGATGGTAAGAAAGCTACCACAAAGAGAAAGAGAGGGGATACATCATCACCTGTCCAACTGCATGATCT TCCTTCTCAACTGGATCCTCACAACACTGCTGCTAATGCAAGGAAGGGGAAACAAAACAAGGTTGAACCACCAGAGGGTCTTCCAGGTGCTTATGCTAAT ATTCATGGAGGGATGGCGGTTCCTACTAGTGCATCTCCAATGGCTGAACCAGTTTTCTCAAGTTCAATGCAATATGGCGGCGTCCTTGAACGTGATGGGA TTGGCAGGCAAAGTAGTGGCTCAGAAATGACTATACCTAGAGAAGGTGTTCCTTCCAGAGATACAGGGAAATCCACTGTTACTACGGTACCAGCATCACC TCCCATGCCTTTTACAGAGCAACAGTTAAAACAGCTTCGAGCCCAGTGCCTTGTTTTTCTAGCTTTTAGAAATTGTTTAGCGCCAAAGAAACTACATCTT GAAATTGCCCTCGGAGCCAACTTTTCTAGAGAAGATGGTTCTCGCAAAGATTTGTCTGACCACAAAGGAAAGTTACAGTCTTTTAATGAACATGGTAATA CATCTGGGGTCATGATGCCATTTGGTGGTCCTTCAGGGTCCTCTTCTGCCGGAAAAGTTCAAGAGGCTGAAACATTGTCAAAGGGTACTGAGAGCCCACA AATAATGGATGATTCAGGTAATCTACATTCTGACATCCATATACTTTCAGAAGAAAAGAAACACCTCCTGGCCACAAGAAGAGAAGTTGAAAGACGGATT CAAGAAAGAGTGGTTGGACAAGCTTCTTCAGCCACATCATCTCATCAGCAAGATTCTTCAAGTACAAGGGGCGCTGTAGTTAATAGACATTTGGATGATG TTGATAGTGGTAATCTGCAGGTTGGAAGGTCTAACCAACCTTCTGTCATAGGTTCAAGCAGCTGGACTGGATTTGTTGGTCATAATGAGGCTTCAAAGGG ACCTCCACAGATCTCTACTGTTCAGCATGAGTTGCCTATAGAAAGAAGAGAGAATATTCCTAGTCAGTTTCAAAATGTTGGTAATAGTTGTGGTTCCGGG AATCACAGTTCTGTTAATCACTTGTCTTCATATTCTTTAAAGGAGCACTGGAAACCTGTTCCAGGGACGGGTGGTGATCTTCATGGAGCAGCCATGAAGA ATGGAAATGTGATGACAAATCATGTGTCTCCAGATGGGTTCAAAACAGTTTCTGTTGATGATGCATCAAAACAGGGTGTCTCTTTTGTTACAGAGCAAGA TGGGAATGAGAGGTCATTGTTGGGTGATTTGCCACATCCAAAATTTACGATGTCGGAGAGATGGATTATGGATCAGCGGAAAAGGAGACATCTAGTTGAG CAAAATTGGGTGCAAAGACAGCAGAAAACAAAGCAAAAGATGGTGACATCTTTTCACAAGTTAAAGGAAAATGTTAGTTCTTCTGAAGATATTTCTGCCA AAACAAAAAGTGTCATAGAGTTGAAAAAACTACAACTATTAGAGCTCCAACGTCGTCTCCGCAGTGATTTCCTGAACGATTTTTTCAAACCAATTACAAT TGAGATGGAACATCTGAAATCAGTTAAGAAACATAGGCATGGTAGGAGGGTGAAACAACTTGAAAAGTTTGAGCAGAAAATGAAGGAAGAGCGTCAGAAA CGGATTCGTGAGAGACAAAAGGAGTTTTTCAGCGAGATAGAAGTTCACAAGGAAAAACTAGATGATGTATTCAAAGCCAAGAGGGAACGGTGGAAGGGTG TCAATAGATATGTGAGGGAGTTTCATAAAAGAAAAGAGCGTGTTCATCGTGAGAAGATTGATAGAATCCAGCGGGAGAAGATTAATTTGCTGAAAATAAA TGATGTGGAGGGCTATCTGCGAATGGTGCAGGATGCAAAATCAGATCGGGTAAAGCAACTTCTTAAAGAGACTGAGAAGTATCTTCAAAAGCTTGGATCC AAGCTACAAGAAGCAAAGGCTGCAGCAGGACGTTTTGGGCATGATGTTGATGAGATAGGGAGTGCCAATTTTCTCGAGAATAGTGAAACTACTTTAGAAA ACGAGGACGAAAGTGATCAGGCAAAGCATTATATGGAAAGCAATGAGAAATATTATATGATGGCGCACAGCATAAAGGAAAGCATTGCAGAGCAGCCATC CAATTTGCAGGGCGGAAAATTGAGGGAGTATCAAATGAATGGCCTGAGGTGGCTGGTTTCCCTATACAACAACCATTTGAATGGAATCCTTGCTGACGAA ATGGGACTGGGTAAAACAGTCCAGGTTATATCTCTAATTTGCTACCTGATGGAAACAAAAAATGATAGAGGGCCATTTCTTGTGGTTGTTCCCTCATCAG TTCTGCCTGGTTGGGAATCGGAAATCAACTTCTGGGCTCCCAGTGTTCTTAAAATTGTTTACTCTGGACCACCTGAGGAGAGACGTCGGTTATTCAAGGA AAGGATTGTTCACCAGAAATTCAATGTTCTTTTGACAACGTATGAATATCTGATGAACAAGCATGACAGGCCAAAGCTGAGCAAAATACACTGGCACTAT ATCATAATTGATGAAGGCCACCGCATAAAGAATGCTTCTTGCAAGTTGAATGCAGAGCTAAAACATTATCAGAGCTCTCATAGATTGCTGTTAACTGGAA CACCATTGCAGAACAATCTTGAAGAGCTGTGGGCACTACTTAACTTCTTGTTACCGAACATATTTAATTCATCAGAGGACTTTTCTCAATGGTTTAACAA GCCATTTGAGAGTACTGGAGATAACTCAGCTGATGAAGCTTTACTCTCTGAGGAGGAGAATCTCTTGATCATAAATCGTCTTCACCAAGTTCTGAGGCCA TTTGTACTTCGGAGGTTGAAACATAAGGTCGAAAATGAGTTGCCCGAGAAGATTGAGAGACTTATAAGATGTGAGGCTTCTGCATATCAAAAACTTTTGA TGAAGAGAGTGGAAGAAAATCTTGGTGCTTTTGGATCTTCAAAGGCTCGATCAGTACATAATTCTGTCATGGAACTTCGTAATATATGCAATCATCCATA TCTCAGCCAGCTTAATTCAGACGAGGTGGATAACTATATCCCAAAGCATTATCTGCCACCTATTATTAGACTTTGTGGGAAACTTGAGATGTTGGACCGT TTATTACCTAAATTGAAGGCCACAGATCATCGGGTTCTTTTCTTTTCGACAATGACTAGGCTTCTGGATGTTATGGAGGAATACTTAACCTTAAAACAGT ATCGGTACCTTCGGTTGGATGGGCATACATCAGGAAGTGATCGCGGTGCTCTTATTGATCTTTTTAACAAATCTGATTCTCCATACTTTATTTTTCTACT CAGCATTCGAGCTGGTGGTGTTGGAGTTAATCTACAAGCTGCTGACACAGTGATCTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_83774; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_16364
| Blastp | Chromatin structure-remodeling complex protein SYD from Arabidopsis with 83.33% of identity |
|---|---|
| Blastx | Chromatin structure-remodeling complex protein SYD from Arabidopsis with 83.33% of identity |
| Eggnog | helicase(COG0553) |
| Kegg | Link to kegg annotations (AT2G28290) |
| CantataDB | Link to cantataDB annotations (CNT0000497) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437498.1) |
| Pfam | Type III restriction enzyme, res subunit (PF04851.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |