Id Trinity | FTRINITY_DN59202_c1_g3_i13 |
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Name Transcript | Ll_transcript_13700 |
Sequence | ATTAACAAATCATACCTCTCCCTCTCTCTTCATCACACTTTCACTTTCACCCTCTCCTTCTCGCTTCCATGGCAACTCAAAACCCTTTCAATAGCATTCT CAAGAGTCTTGAGAAGCCTAGTGGTGATGGTGTTTTCGGAAATTACTATAGTTTGCCAGCTCTCAACGATCCTAGAATCGATAGACTTCCTTACTCTATC AGGATACTTTTGGAATCTGCAATTCGTAACTGCGACGAGTTTCAAGTTAAGAGTAACGATGTTGAAAAAATTATTGATTGGGAAAATACCTCACCGAAAC AGGTGGAAATTCCATTCAAGCCAGCCAGAGTGCTTCTGCAGGATTTTACTGGGGTGCCTGCTGTTGTTGATCTTGCTTGCATGCGAGATGCAATGAACAA CCTTGGTGGTGATTCTAATAAGATTAACCCACTTGTACCAGTAGATCTTGTTATTGATCACTCAGTTCAGGTTGACGTGGCAAGATCAGAAAATGCTGTT CAGGCAAATATGGAGCTTGAATTCAAGAGGAACAAGGAAAGATTTGGTTTCCTCAAGTGGGGTTCAAATGCATTCAATAACATGCTCGTTGTCCCCCCTG GCTCAGGGATAGTCCACCAGGTCAATTTAGAATACCTTGGCAGAGTCGTGTTCAATACAAATGGTGTGCTCTATCCTGACAGTGTTGTTGGAACTGATTC ACACACAACTATGATAGATGGCTTGGGCGTTGCTGGGTGGGGAGTTGGTGGAATTGAAGCAGAGGCTACAATGCTTGGCCAGCCCATGAGCATGGTCCTA CCCGGTGTCGTTGGGTTTAAATTAGTAGGAAAACTACGAGATGGTGTGACAGCTACTGACTTGGTGTTGACCGTTACTCAAATACTTAGAAAGCATGGGG TTGTTGGCAAGTTTGTGGAGTTTTATGGGGAAGGGATGAGTGAGCTAACTTTAGCAGATCGTGCCACCATAGCAAACATGTCTCCTGAGTACGGTGCAAC CATGGGCTTCTTTCCCGTGGATCATGTCACTTTGCAATATTTGAAACTGACTGGCAGAAGTGATGAGACTGTTTCTATGATAGAGTCCTACCTGCGAGCT AATAAGATGTTTGTAGACTATAGTGAGCCCCAAGTGGAGAGAGTGTACTCATCATATTTGGAGCTCAATCTTGAGGATGTAGATCCCTGTATCTCTGGTC CAAAGAGGCCTCATGACCGTGTCCCTTTGAAAGAAATGAAGGTAGATTGGCATGCATGCCTCAACAACAAAGTTGGGTTTAAGGGATTTGCTATACCAAA AGAAGCACAAGGAAAAGTTGCAAAATTTGATTTCCATGGGCAGCCAGCCGAGCTCAAGCATGGCAGTGTTGTGATTGCTGCAATCACAAGTTGTACAAAT ACATCAAACCCAAGTGTTATGCTTGGAGCTGGTCTGGTTGCAAAAAAGGCCCACGAGCTTGGTTTGCAGGTCAAGCCTTGGGTTAAAACAAGTCTTGCTC CAGGCTCTGGAGTTGTTACAAAATATCTACTCCAGAGTGGACTCCAGAAATATCTAAATGAACAAGGTTTTCACATTGTTGGGTTTGGCTGTACAACATG TATTGGCAATTCTGGGGACCTGAATGAATCCGTTGCCTCTGCCATCTCAGAAAATGATATTGTAGCTGCTGCTGTGTTGTCTGGAAACCGTAATTTTGAG GGCCGTGTGCATGCCTTGACAAGGGCTAACTACCTTGCCTCACCTCC BLAST |
Tissue | flowers |
Gene name | LI_gene_83781; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_13700
Blastp | Aconitate hydratase, cytoplasmic from Cucurbita with 90.34% of identity |
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Blastx | Aconitate hydratase, cytoplasmic from Cucurbita with 90.34% of identity |
Eggnog | - |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0000366) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444853.1) |
Pfam | Aconitase family (aconitate hydratase) (PF00330.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |