Id Trinity | FTRINITY_DN59205_c2_g1_i19 |
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Name Transcript | Ll_transcript_15944 |
Sequence | TTTTCTTCCTCTGTCACCACCCAATCCTCTTACACCCCATTACGGTGTTTTCATCATCACTATGTTTGGTACAGAAGCTTATCATTATTATGATATGGGT GGTGGTTCCCATGATTTGAGGGGCTTGGGGAAGAGATCCACAGAGTGGGATTTGAATGAGTGGAGATGGGATGGTGATATGTTCTTAGCTAGCCGGTTGA ATCCGGCGGTGGCTGCTGGTGTGGGGCAGCAGTTTTTCCCTCTTGGGTCAGGGATCCCTGTTGCTGCGGTCAGGAGCTCCGGTTCCCCAAATGGTAATTC TTCCTGTTCCGAGGAAGCAGATATTGAGAACAAAAAAGGGAACAAGGAAGGGGAGAGGAAAAGGAGGGTAATTGTGTTGGAGGATGATGGATTGAATGAG GAAGCAGGTGCCCTTAGCTTAAAGCTTGGTGGTCATGGAGAACATTTGGCAGGTAGGGAGGTTGCGAGCTGGGATGGTGTTAATGGCAAGAAAAATAGAG TGGGTGGAGGTACTTCGAATCGAGCTGTTTGTCAGGTGGAGGATTGCAGTGCCGATCTGACCAAAGCTAAAGATTATCACCGGCGTCATAAAGTGTGTGA ACTTCACTCCAAGGCTACTAACGCAC BLAST |
Tissue | flowers |
Gene name | LI_gene_83815; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_15944
Blastp | Squamosa promoter-binding-like protein 12 from Arabidopsis with 41.67% of identity |
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Blastx | Squamosa promoter-binding-like protein 1 from Arabidopsis with 39.66% of identity |
Eggnog | Squamosa promoter-binding-like protein(ENOG4110DQF) |
Kegg | Link to kegg annotations (AT3G60030) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019441265.1) |
Pfam | SBP domain (PF03110.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |