Id Trinity | FTRINITY_DN59212_c2_g1_i1 |
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Name Transcript | Ll_transcript_14931 |
Sequence | AAATGTGCGATTGGCCGTGAGCGGGAAACTGCTGTTTGCCTTATGCAAAAGTACATAGATAAGGGGTCTGAATTGCAAATCAGGTCAGTTGTTGCTCTCG ATCATCTCAAAAACTACATATATGTGGAAGCAGATAAAGAGGCCCATGTGAGAGAGGCTTGCAAAGGTCTACGCAACATATTTGGCCAAAAAATAACGCT TGTTCCGATCAGAGAAATGACTGATGTCCTGTCAGTTGAAAGCAAAGCTATTGACCTTGCCAGAGATACTTGGGTCAGAATGAAGATTGGGACATATAAA GGGGACCTTGCTAAAGTAGTAGATGTCGACAATGTGCGGCAGAGGGTTACAGTGAAACTAATTCCAAGGATAGACTTACAGGCCCTTGCAAACAAATTGG AAGGTAGAGAAGTTGTAAAGAAGAA BLAST |
Tissue | flowers |
Gene name | LI_gene_83879; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_14931
Blastp | Putative transcription elongation factor SPT5 homolog 1 from Arabidopsis with 88.03% of identity |
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Blastx | Putative transcription elongation factor SPT5 homolog 1 from Arabidopsis with 88.03% of identity |
Eggnog | Transcription elongation factor(COG5164) |
Kegg | Link to kegg annotations (AT4G08350) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_004502577.1) |
Pfam | Early transcription elongation factor of RNA pol II, NGN section (PF03439.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |