| Id Trinity | FTRINITY_DN59212_c2_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_14932 |
| Sequence | TTATGATTTATCCATTGACATGTCCTCGTTTCAAAAATGGTAATTTTATTATTCGACGGCCAAATATATTGAAAGGCTCGGACGTACGAAGCTACGAACA TAGCACCGACCGCGTTATACCACTCTCACATCAGAAGAACGAACCTCTAAGGTTTTCTTTGCTTCTTCTCTCTGCAACTCTGCATCATAATGAGTCGCCG AGGAATGGACGACGACGAATTCGACGACGAGGAGGAAGAGCATGTTGCTGATTTCGACGACGAGGAGGAAGAGGAGAGAGGCGACGGAATGAAGAGGAGG AGATCTGGCTTCATTGATGATGATGCAGATGAGGTCGATGAGGATGAAGAAGAGGAGGATGATGATGATGATGAGGATTTCGATGGCGGAGGTGGTGGCC GGAAGCGCCAGCGCAAGAGGAAGTCCGCTGCTTCCTACTTCGATGAAGAGGCGGCTGTTGATTCTGATGAGGAGGAGGAAGAGGAGGAAGGAGAGGATGA CTTCATTGTTGACGGTGGATCTGATCTTCCGGAGGAACATGATGGTAGAAGTCTGCGTCGTGCCCGTATGCTGCCACATGACGACGAAGACCATGAAGAT CTTGAAGCTGTGGCACAAAGCATTCAACAAAGGTACGCAAGGCGTCAGGCAGATTATGATGAAGAAACTACTGATGTAGAACAACAAGCTCTTTTGCCAT CTGTTAGAGATCCAAAGCTCTGGATGGTGAAATGTGCAATTGGTCGTGAGCGGGAAACTGCTGTCTGCCTTATGCAAAAGTACATAGATAAGGGGTCTGA ATTGCAAATCAGGTCAGTTATTGCTCTAGATCATCTCAAAAACTACATATATGTGGAAGCAGATAAAGAGTCCCATGTAAGAGAGGCTTGCAAAGGTCTA CGTAACATATTTGGTCAAAAAATAACGCTCGTTCCAATTAGAGAAATGACTGATGTTCTATCAGTTGAAAGTAAAGCTATTGACCTTGCCAGAGATACTT GGGTCAGAATGAAGATTGGGACATATAAAGGGGACCTTGCTAAAGTAGTAGATGTCGACAATGTGCGGCAGAGGGTTACAGTGAAACTAATTCCAAGGAT AGACTTACAGGCCCTTGCAAACAAATTGGAAGGTAGAGAAGTTGTAAAGAAGAAGGCATTTGTTCCTCCTCCTCGTTTTCTTAATGTTGAAGAAGCTAGG GAACTGCACATCCGTGTGGAGCATAGACGTGATGCCTACGGGGAACGATTTGATGCAATTGGAGGGATGATGTTCAAGGATGGATTCTTATACAAAACAG TATCAATAAAATCCATTAGTGCTCAGAACATCAAACCTACATTTGATGAGCTTGAAAAATTTCGTAAACCGGGTGAGAATGGAGATGATGATGTAGCTAG CCTGTCATCTTTATTTGCAAACAGAAAGAAAGGGCATTTTTTGAAAGGTGATGCTGTCATCGTGATCAAGGGTGATTTAAAGAATTTGAAGGGCTGGGTG GAAAAAGTTGATGAAGATAATGTTCATATAAGACCAGAAATTAAGGGTCTTCCAAAAACGCTTGCTGTAAATGAAAAAGAACTCTGTAAATATTTTGAAC CCGGAAACCATGTTAAGGTTGTTTCTGGTGCTCGAGAGGGTGCGACTGGCATGGTTGTGAAGGTGGAGCAGCATGTCCTGATCTTAGTATCTGATACAAC AAAGGAACATATCCGTGTGTTTGCTGATGATGTTGTGGAGAGTTCTGAAGTGACCACTGGAGTTACTAAAATTGGAGACTACGAACTTCGTGATCTTGTA CTGCTAGATAATTTGAGCTTTGGTGTGATAATACGTGTAGAAAGTGAGGCATTTCAGGTTCTTAAGGGTGTTCCTGACCGAGCTGAAGTGGTGCTTGTTA AATTGAGAGAGATCAAATGTAAGTTAGATAAGAAAATCAGCGTGCAAGACAGATTCAAAAACACAGTATCAGCAAAGGATGCTGTGCGGATTGTTGAGGG TCCCTGCAAAGGCAAACAAGGTCCTGTGGAGCACATATATAGAGGAATCTTGTTCATCTGTGATCGCCATCATCTTGAACATGCAGGCTTTATATGTGTT AAGGCTCAATCATGTGTGGTTGTAGGAGGTTCACGTTCCAATGGGGACATAAATGGTAATGCCTACTCTAGATTTGGCAGCCTCAGAACCCCCTCTCGTA TTCCACAGTCTCCCAGTAGGTTTTCTAGGGGAGGGCCTCCAATTCATTCTGGAGGAAGAGGCCGAGGTGGAAGGGGGCACGATGGTCTGACAGGTTCAAC AGTTAAAGTACGCCAGGGTCCCTACAAAGGTTATCGTGGGCGTGTTATTGAAGTTAAAGGCACATCAGTTCGTGTTGAATTGGAGTCCCAAATGAAGGTT GTGACAGTGGACCGCAACCATATATCGGACAATGTGGCTGTAACCCCATATCGTGAATCTCGATACGGGATGGGAAGTGAAACCCCTATGCATCCTTCTC GAACTCCCTTACATCCATATATGACTCCTATGAGAGATCCTGGAGCGACCCCTATTCACGATGGAATGAGGACACCTATGCGTGACCGAGCATGGAATCC TTATACACCAATGAGTCCTCCAAGGGATAACTGGGAGGATGGAAATCCAGGCTCTTGGGGAGCAAGTCCACAGTACCAGCCAGGAAGCCCTGTTTCACGG CCATATGAAGCTCCAACTCCTGGTGCTGGTTGGGCCAGCACTCCTGGTGGCAATTATAATGAAGCTGGGACTCCCCGGGACAGTTCTGCCTTTGCCAATG CTCCAAGTCCATATTTACCATCAACACCTGGTGGGCAGCCTCTGACACCAAGTTCAGTGTCTTATCTGCCTGGCACCCCTGGAGGACAACCTATGACTCC AGGAACTGGTGGTCTGGACATGATGTCCCCAGTTTTAGGTGGAAACAGCGAAGGGCCTTGGTTTTTGCCAGACATATTAGTTAATGTACACAAGCCCGGA GAGGAATCAGTTGGGGTTATAAGAGAGGTTCTTACGGTATGTTCCCATAGAAACTTGCTTGTGTATGCATGCTTGGTGCTGTTAGGTCTGTGAACCAGGG AACTTCAAGTTGAGACAAATTATGCAGAAAAAATCATTTGGGAATTGTTGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_83879; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_14932
| Blastp | Putative transcription elongation factor SPT5 homolog 1 from Arabidopsis with 75.59% of identity |
|---|---|
| Blastx | Putative transcription elongation factor SPT5 homolog 1 from Arabidopsis with 75.06% of identity |
| Eggnog | Transcription elongation factor(COG5164) |
| Kegg | Link to kegg annotations (AT4G08350) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415219.1) |
| Pfam | Spt5 transcription elongation factor, acidic N-terminal (PF11942.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |