Ll_transcript_14941

Id TrinityFTRINITY_DN59212_c2_g1_i5
Name TranscriptLl_transcript_14941
SequenceTTATGATTTATCCATTGACATGTCCTCGTTTCAAAAATGGTAATTTTATTATTCGACGGCCAAATATATTGAAAGGCTCGGACGTACGAAGCTACGAACA TAGCACCGACCGCGTTATACCACTCTCACATCAGAAGAACGAACCTCTAAGGTTTTCTTTGCTTCTTCTCTCTGCAACTCTGCATCATAATGAGTCGCCG AGGAATGGACGACGACGAATTCGACGACGAGGAGGAAGAGCATGTTGCTGATTTCGACGACGAGGAGGAAGAGGAGAGAGGCGACGGAATGAAGAGGAGG AGATCTGGCTTCATTGATGATGATGCAGATGAGGTCGATGAGGATGAAGAAGAGGAGGATGATGATGATGATGAGGATTTCGATGGCGGAGGTGGTGGCC GGAAGCGCCAGCGCAAGAGGAAGTCCGCTGCTTCCTACTTCGATGAAGAGGCGGCTGTTGATTCTGATGAGGAGGAGGAAGAGGAGGAAGGAGAGGATGA CTTCATTGTTGACGGTGGATCTGATCTTCCGGAGGAACATGATGGTAGAAGTCTGCGTCGTGCCCGTATGCTGCCACATGACGACGAAGACCATGAAGAT CTTGAAGCTGTGGCACAAAGCATTCAACAAAGGTACGCAAGGCGTCAGGCAGATTATGATGAAGAAACTACTGATGTAGAACAACAAGCTCTTTTGCCAT CTGTTAGAGATCCAAAGCTCTGGATGGTGAAATGTGCAATTGGTCGTGAGCGGGAAACTGCTGTCTGCCTTATGCAAAAGTACATAGATAAGGGGTCTGA ATTGCAAATCAGGTCAGTTATTGCTCTAGATCATCTCAAAAACTACATATATGTGGAAGCAGATAAAGAGTCCCATGTAAGAGAGGCTTGCAAAGGTCTA CGTAACATATTTGGTCAAAAAATAACGCTCGTTCCAATTAGAGAAATGACTGATGTTCTATCAGTTGAAAGTAAAGCTATTGACCTTGCCAGAGATACTT GGGTCAGAATGAAGATTGGGACATATAAAGGGGACCTTGCTAAAGTAGTAGATGTCGACAATGTGCGGCAGAGGGTTACAGTGAAACTAATTCCAAGGAT AGACTTACAGGCCCTTGCAAACAAATTGGAAGGTAGAGAAGTTGTAAAGAAGAAGGCATTTGTTCCTCCTCCTCGTTTTCTTAATGTTGAAGAAGCTAGG GAACTGCACATCCGTGTGGAGCATAGACGTGATACCTATGGGGAACGATTTGATGCAATTGGAGGCATGATGTTCAAGGATGGATTCTTATACAAAACAG TATCAATAAAATCCATTAGTGCTCAGAACATCAAACCTACATTTGATGAACTTGAAAAATTCCGTAAACCGGGCGAGAATGGAGATGGTGATGTAGCTAG TCTGTCAACCTTATTTGCAAACAGAAAGAAAGGGCATTTTTTGAAAGGTGATGCTGTCATTGTGATCAAGGGTGACTTAAAGAATTTGAAGGGGTGGGTG GAGAAAGTTGATGAAGATAATGTTCATATAAGGCCGGAAATTAAGGGTCTACCGAAAACTCTTGCTGTGAACGAAAAGGAACTGTGTAAATATTTTGAAC CTGGAAACCATGTTAAGGTTGTTTCTGGTGCTCAAGCGGGTGCCACTGGCATGGTGGTCAAGGTGGAGCAGCATGTCCTGATTTTAATATCTGACACAAC AAAGGAACATATCCGTGTGTTTGCTGATGATGTCGTGGAAAGTTCTGAAGTGACCACTGGAGTTACAAGCATTGGGGACTATGAACTTCGTGATCTTGTA TTGCTAGATAATTTGAGCTTTGGTGTGATAATACGTGTAGAAAGTGAGGCATTTCAGGTTCTTAAAGGTGTCCCTGACCGAGCTGAAGTTGTGCTTGTTA AATTAAGAGAGGTCAAATCTAAATTAGATAAGAAGATAAGCGTGCAAGACAGATTCAAAAATACAGTTTCAGCGAAGGATGTTGTACGAATTGTTGAGGG TCCCTGCAAAGGCAAACAAGGTCCTGTGGAGCACATATATAGAGGAATCTTGTTCATCTGTGATCGCCATCATCTTGAACATGCAGGCTTTATATGTGTT AAGGCTCAATCATGTGTGGTTGTAGGAGGTTCACGTTCCAATGGGGACATAAATGGTAATGCCTACTCTAGATTTGGCAGCCTCAGAACCCCCTCTCGTA TTCCACAGTCTCCCAGTAGGTTTTCTAGGGGAGGGCCTCCAATTCATTCTGGAGGAAGAGGCCGAGGTGGAAGGGGGCACGATGGTCTGACAGGTTCAAC AGTTAAAGTACGCCAGGGTCCCTACAAAGGTTATCGTGGGCGTGTTATTGAAGTTAAAGGCACATCAGTTCGTGTTGAATTGGAGTCCCAAATGAAGGTT GTGACAGTGGACCGCAACCATATATCGGACAATGTGGCTGTAACCCCATATCGTGAATCTCGATACGGGATGGGAAGTGAAACCCCTATGCATCCTTCTC GAACTCCCTTACATCCATATATGACTCCTATGAGAGATCCTGGAGCGACCCCTATTCACGATGGAATGAGAACACCTATGCGTGACCGGGCATGGAATCC TTATACACCAATGAGTCCTCCAAGGGATAACTGGGAAGATGGAAATCCAGGCTCTTGGGGAGCAAGTCCACAGTACCAACCAGGAAGCCCTGCTTCACGG CCATATGATGCTCCAACTCCTGGTGCTGGTTGGGCCAGCACTCCTGGTGGCAATTATAGCGAGGCTGGGACTCCCCGGGACACTTCTGCCTATGCCAATG CTCCAAGTCCATATTTACCATCAACACCTGGCGGGCAGCCTATGACACCAAATTCAGCGTCTTATCTTCCTGGAACCCCTGGAGGACAGCCTATGACTCC AGGAACTGGTGGTCTGGACATGATGTCCCCAGTTTTAGGTGGGGACAACGAAGGCCCTTGGTTTATGCCAGAGATATTAGT BLAST
Tissueflowers
Gene nameLI_gene_83879; 
Additional informationdetails; 

Expression of Ll_transcript_14941

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_14941
BlastpPutative transcription elongation factor SPT5 homolog 1 from Arabidopsis with 76% of identity
BlastxPutative transcription elongation factor SPT5 homolog 1 from Arabidopsis with 75.48% of identity
EggnogTranscription elongation factor(COG5164)
KeggLink to kegg annotations (AT4G08350)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019416440.1)
PfamSpt5 transcription elongation factor, acidic N-terminal (PF11942.7)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;