| Id Trinity | FTRINITY_DN59221_c1_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_13602 |
| Sequence | CTTCAATTCAATTGGCAATGAAAGAAGTAAGAGGTTGTTCCAGCAACCTCCTTCAAGTTTTTTTGAGTCTTCTCCTTCTCCAGCTCTAGATCACAACCAA CTCTCACTTCTTCAACAACTTCTCCTTAATCGATTATTTCGATCTGATTAAAGCAGCTTCTGATCTATGGCACTTTCTGGTATGAGAGGCCTCTCCGTTT TCATCAGTGACATTCGTAATTGTCAGAACAAAGAACTTGAGAGGATTCGTGTTGATAAAGAGCTTGGTAATATTCGAACTCGCTTCAAGAATGAAAAGGC TTTGAGTCCATATGAGAAAAAGAAATATGTTTGGAAGATGCTATACATATATATGCTTGGCTACGATGTGGATTTTGGTCACATGGAGGCTGTTTCTCTT ATATCTGCTCCAAAGTATCCAGAAAAGCAGGTTGGGTACATTGTAACATCGAGTTTGCTTAATGAAAATCACGACTTTCTCAGGTTGGCGATAAATACTG TACGCAATGATATTATTGGTCGCAATGAAACCTTCCAGTGCCTAGCATTGACAATGGTTGGAAATATAGGGGGGAGAGAATTTGCTGAGTCTTTAGCACC TGATGTACAGAAATTGCTGTTATCTAGTAGCTGCAGACCACTGGTGAGAAAAAAAGCTGCATTGTGCTTGCTGCGCTTGTATAGGAAAAATCCTGATGTT GTCAATGTGGATGGATGGGCGGATCGGATGGCACAACTTCTGGATGAGCGCGACCTTGGTGTTTTGACATCTTCTATGAGCCTGCTTGTTGCATTAGTAT CAAACCACCACGAGGCATATTGGAGTTGTCTTCCTAAGTGCGTCAAAATTTTGGAGCGCCTTGCTAGGAACCAAGATATCCCTCAAGAATACACTTACTA TGGTATCCCATCTCCCTGGCTTCAGGTAAAAACAATGAGGGCTCTTCAATACTTCCCTACCGTTGAGGATCCAAATACCAGAAGATCGTTATTCGAGGTC TTACAAAGGATACTGATGGGCACTGATGTCGTGAAAAATGTGAACAAAAATAATGCATCCCATGCTGTTCTTTTTGAAGCCCTAGCTCTGGTGATGCATC TTGATGCTGATAAAGAGATGATGTCTCAATGTGTGGCTCTTCTTGGGAAATTCATTGCTGTCCGCGAACCAAACATTCGATATCTTGGCTTGGAAAATAT GACTAGAATGTTAATGGTTACAGATGTGCAAGATATCATAAAACGACATCAAGCTCAGATTATTACCTCATTGAAGGATCCTGACATCAGTATTCGGAGG CGTGCTCTAGATTTACTTTATGGTATGTGTGACATTTCAAATGCAAAGGATATAGTTGAAGAACTACTGCAGGTATGTAACTAGATCCAGACTAATTTAT GCAATCTGGAAATCTCATTGTAAACCCTTTCCCCCCTCCTCTGTCACATAAATAAAAACAGATGAAAGAAAGTGGACCAGCTATCACATGCTGTTAGATA TATATACCATTAATTTTCCTGCACCCAATAATGTAAGCTTTTGGGAAAGTTGACTCTTGACATGGTATCAGTGCCTCTACGACCAAGTGGTTAGGAGTTC GTTCTCTGCCATCATTCTTCTAAATACATAAATAGAAGTGGAATTTCAGCACTAGGTACTGTGGGCCTGTGCACAGTCCACGCTTCAAGCCGAAAGGGTA TTGCATGAGGGGGGGTGTTAGATATAGAAAACCATTCATTTGCCTTCACCGAACAACTTAAGCGTTTGGGAAAGTTGGCTTTTGACACATGTAAACAAAA AATGATTAGTTTGCAATTGCAACTGTTTTGTAGTATCTCAGCACAGCAGAGTTTGCAATGCGCGAGGAATTGTCACTTAAAGCAGCTATTCTTGCTGAGA AGTTTGCACCAGATCTTTCATGGTATGTTGATGTGATTCTTCAATTAATTGACAAGGCAGGAGATTTTGTTAGCGATGACATCTGGTTTCGTGTGGTGCA ATTTGTTACAAACAATGAAGATCTACAGCCTTATGCCGCAGCAAAAGCACGAGATTATCTTGACAAACCTGCCATACATGAGACAATGGTCAAGGTCAGC GCATATATACTTGGAGAGTTTGGACACCTTCTAGCAAGACGACCGGGATGCAGCCCAAAGGAAATATTTAACATTATACACGAGAAGCTTCCTACTGTAT CGACTTCTACTATCTCTATTCTTCTTTCAACATATGCTAAAATTCTGATGCACACTCAACCGCCAGACCCTGAACTACAAAATCAGATATGGGCAATATT TAAAAAATATGAAAGTTCAATTGAGGTTGAAATACAACAACGAGCAGTTGAATACTTTACATTGAGTAGAAAAGGTGAAGACCTAATGGATATATTGGCT GAAATGCCAAAATTTCCTGAACGGCAGTCTGCATTGGTAAGGAAGGCTGAAGATACTGAGGTTGATACCGCGGAAAAAAGTGCCATAAAGTTGCGAGCCC AACAACAGTCTCAAACATCAAATGCTATGGTTGTAACAGACCAATCTTATGCAAATAGAACTCCGCCATCCAGCCAACTTAGTCTTGTGAAGATTCCCAG TAAGAGCTGTAAGATGGATGATAGTTCAGCAGATCAAAGATTATCTCAGGAAAATGGGACATCGAATAGAGAAGATTCTGCACCTCCCTCTGCAGATCTC CTTAGTGATCTCTTGGGTCCATTGGCTATTGAAGGACCTCCCAGTACCAGTGTCCACCCTCAGCCTAGCACAACTTCTGGATTGGAAGATACTCTAGTTG ATGCCACAGCCATAGTACCTGCAGGAGAGCAGGCCAATGCTGTGCAGCCAATTGGAAATATTGCTGAAAGATTTAATGCTTTGTGTGTAAAGGATAGTGG CGTACTATATGAGGATCCTTATATTCAGATTGGCATAAAAGCAGAGTGGAGAGCCCATCATGGACATCTTATTCTTTTCTTGGGGAACAAGAATACTTCA CCTCTTGTCTCTGTTCAAGCTATAATATTGCCTCCAACCCATTTGAAGATGGAGCTCTCACTAGTACCAGAAACTATACCTCCACGGGCACAGGTGCAAT GCCCACTTGAAGTCATTAACCTCCGCCCAAGCAGAGATGTTGCTGTTGTTGACTTCTCCTACAAGTTTGGTAACAACATGGTCAATGCCAAACTTCGACT CCCCGCTGTCCTAAATAAATTTCTTCAGCCTATACCTGTTTCTGCCGAGGAGTTTTTCCCTCAATGGAGATCACTTACTGGACCACCTTTGAAGCTTCAA GAAGTGGTTAGAGGTGTTAGACCACTTCCGGTGCTTGAAATGGCAAACTTATTCAATAGTTTCCATTTGACGGTTTCTCCTGGGCTTGATCCTAATCCAA ACAATCTTGTTGCGAGCACAACATTCTTTTCAGAAAGTACAAGGGCAATGCTCTGTTTAATGAGAATTGAAACAGATCCAGCAGACAGAACCCAGCTGCG ATTGACAGTTGCTTCAGGGGACCCAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_83976; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_13602
| Blastp | AP-2 complex subunit alpha-1 from Arabidopsis with 74.19% of identity |
|---|---|
| Blastx | AP-2 complex subunit alpha-1 from Arabidopsis with 73.78% of identity |
| Eggnog | Adaptor-related protein complex 2, alpha(ENOG410XNQE) |
| Kegg | Link to kegg annotations (AT5G22770) |
| CantataDB | Link to cantataDB annotations (CNT0002768) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457939.1) |
| Pfam | Adaptin N terminal region (PF01602.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |