Ll_transcript_15696

• Id Trinity: FTRINITY_DN59222_c1_g1_i26
• Name Transcript: Ll_transcript_15696
• Sequence: AAATAAACCGCAACACCCATTTGTAACATAACAGTTGATATGCCACTTTCCTTCTCCACCTTGTTCTGCATTCATTTGTATCGGCACTTTGCGAGAGATA TCTCAATTATTCACCCACTCCGGCGATGGCTCAGCCACTCGTGAAGAAAGACGATGACCGTGACGATGAAGATGAGTATTCCCCATTTTTGGGAATTGAA AAGGGGGCTGTTCTTCAAGAGGCCAGGGTTTTTAATGACCCACAACTTGATGCCAGGAGATGTTCACAGGTTATCACAAAACTTTTATACCTGCTTAATC AGGGAGAGTCATTTACAAAGGTCGAAGCCACAGAAGTGTTCTTTTCGGTGACTAAACTTTTCCAGTCTCGCGATCTTGGGTTAAGAAGAATGGTCTACTT GATTATTAAGGAACTCTCCCCCTCAGCCGATGAGGTTATTATCGTTACAAGCTCTCTCATGAAGGACATGAATAGTAAGACTGATATGTATAGGGCAAAT GCCATTCGTGTGCTCTGTCGTATCACGGATGGAACCCTCCTTACCCAAATTGAACGGTATTTGAAACAAGCAATTGTAGATAAGAATCCAGTTGTTGCAA GTGCAGCCCTAGTTAGCGGCATTCATATTCTCCAGACAAATCCTGAGATTGTAAAAAGGTGGAGCAATGAGGTTCAGGAAGCTGTTCAATCAAGAGCAGC TCTTGTACAATTTCATGCCCTGGCTTTGCTACATCAGATACGGCAAAATGATCGATTAGCTGTTAGCAAGCTGGTTACCAGCTTGACAAGGGGAACCGTT CGCTCACCTTTGGCCCAATGCCTTCTGATCCGTTATACAAGTCAGGTGTGTTTCCATTTCATTTATTGCTATGGTTGTGATTATATTTATTCACATAATC TTTATGTACCTACTCTCTAGGTCATTCGTGAGTCAGGGAATAATAACACACAATCCGGGGACCGTCTCTTCTATGATTATCTTGAGAGTTGCCTTCGGCA CAAGTCAGAGATGGTGATTTTTGAAGCTGCCAAGGCAATTACAGAGCTCAATGGCGTAACAAGCCGGGAATTAACTCCAGCTATTACTGTTCTTCAGCTT TTTTTAAGTTCTTCTAAGCCAGTCTTGAGATTTGCTGCTGTCCGCACCTTGAACAAGGTGGCAATGACACACCCAATGGCAGTCACTAACTGCAACATTG ATATGGAAAGTTTAATCTCTGACCAAAACAGAAGCATTGCTACACTTGCTATTACTACTCTCTTGAAGACAGGAAATGAATCAAGTGTGGACCGTCTTAT GAAGCAGATCACAAATTTCATGTCTGATATTGCTGATGAGTTCAAAATTGTTGTTGTTGAAGCAATAAGATCATTATGTTTGAAGTTCCCATTAAAATAT AGATCTCTGATGAATTTCCTGAGTAGCATTCTCAGGGAAGAAGGTGGGTTTGATTACAAGAAAGCAATTGTAGATTCAATTGTTATTCTTATTAGAGACA TTCCTGATGCAAAGGAAAGCGGGTTGCTTCATTTGTGTGAATTCATTGAAGATTGTGAATTCACTTATTTGTCCACGCAGATACTGCACTTCCTGGGAGT TGAAGGGCCAAAAACATTAGACCCCAGCAAATATATTCGTTATATCTATAACAGAGTGCATCTTGAGAATGCAACTGTCAGGGCCAGTGCTGTGAGCACA CTGGCTAAGTTTGGTGCTGCAGTTGATGGATTGAAGCCTCACATATTTGTCCTCCTAAGGCGATGTCTTTTTGACAATGACGATGAGGTTCGTGATAGGG CAACACTTTATCTGAACACACTTGGAGGTGATGGTTCAGTTGTTGAGACTGATAAAGATGTGAAGGACTTTCTCTTTGGGTCATTTGATATCCCACTTGT CAATCTAGAGACTAGTTTGAAAAATTATGAGCCTTCTGAAGAGGCTTTTGACATTAACTCGGTGCCCAAGGTGGTCAAGTCTCAGCCTCTTGCAGAGAAG AAAGCCACAGGTAAAAAACCAACGGGTTTGGGTGCTCCTCTCAGTGCTCCCCCATCTACTGCAGATGCATATGAAAGGCTGCTGTTGTCCATTCCTGAGT TTGCAAATTTTGGGAAGCATTTTAAGTCCTCACCGCCTGTGGAGCTTACTGAAGCAGAGACAGAATATGCAGTTAATGTTGTTAAACACATTTTTGATAG GCATGTTGTGTTTCAGTACAACTGCACAAACACAATACCGGAACAGTTATTGGAAGATGTTATTGTAATTGTGGATGCATCAGAAGCAGAGGAGTTTTCT GAGGTTTTTGCCAAGCCTCTCAGATCTCTTCCTTATGATTCACCTGGGCAGACTTTTGTGGCATTCGAGAAACCCGAGGGACTGCCAACAGCTGGAAAAT TTTCTAACATTCTGAAATTTATTGTCAAAGAGGTTGACCCAACCACTGGCGAGGCAGATGATGATGGAGTTGAAGATGAATACCAGCTTGAAGATCTGGA GGTTGTTGCAGCAGATTACATATTGAAAGTGGGGGTGTCTAATTTCAGGAATGCATGGGAAAGTATGGGCCCTGATTCTGAGCGAGTGGATGAATATGGT CTTGGCCCAAGGGAGAGCTTGGCTGAAGCTGTAAATACAGTCATCAACCTTCTTGGAATGCAGCCTTGTGAGGGCACAGAAGTTGTTCCACCCAATTCAA GGTCACACACATGCTTAATGTCAGGTGTATTCATAGGGAATGTGAAGGTGCTCGTGCGGCTGTCTTTTGGACTTGACGGTCCGAAGGATGTTGCAATGAA ACTGGCTGTCAGATCCGATGATGAAGCTGTCAGCGATGCTATTCATGAGATTGTGGCTAGTGGCTAATTCTGTAAGTCATGAAATGTTATGACTCAATTC AATATTTCTTTCTAATGGAGTTAAAATAGGCACATAGATAGATGTGTGTAAAATTGCTAAACTGAATGCTTGAGCTTAGTTTACTGCGATTTATTTGGCC CTCAATCACTTCGGGGTTATTGGAGCAAACTTCAATGCTCGTGATAATACTTTGTTTTTTTGGTAGCAAATGTAATATGAATTTTGAAGATTTTGCCATA ATATTTGTTTCATTAATGAACTGGATATTTGTTTAACAAAAAA
• Tissue: flowers
• Gene name: LI_gene_83979;
• Additional information: details;

Expression of Ll_transcript_15696

FPKM

• FPAB: 0
• FPNAB: 0.4
• LF1: 0.2
• LF2: 0.4
• LF3: 0.2
• LF4: 0.4
• UF1: 0
• UF2: 0.2
• UF3: 0.2
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_15696

• Blastp: Coatomer subunit gamma-2 from Oryza sativa with 85.95% of identity
• Blastx: Coatomer subunit gamma-2 from Oryza sativa with 84.37% of identity
• Eggnog: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity)(COG5240)
• Kegg: Link to kegg annotations (4342665)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448506.1)
• Pfam: Adaptin N terminal region (PF01602.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;