| Id Trinity | FTRINITY_DN59224_c2_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_15902 |
| Sequence | AAAGCCTTCGGAGTCTAGACGTAGAGGTTGGAAGTGCTGATGGCCATGATGATGGTGGAGAAAGACAAGTTTCTGCAGAGAGGACAGCAGGTGATTTACA GGCTGCACGTACCAGAAGATCGAATATGCCTTTCGGTCATTCCTCTGCTGTAGTTGGAAGAGATGCATCTCTCCATAGTGTTACTGAAGTTTCTGAAAAT TCAAGCCGAGATGCAGATCAAGATGGTCCAGCAGCAGAGCAGCAGGGGAACAGTGATTCTGGCTCAGGAGCAATTGACCCTACTTTTCTAGATGCTCTCC CCGAGGAGCTGCGTGCTGAAGTGCTCTCAGCTCAGCAAGCTCAAGTTGCTCAACCATCAAATACCGAGTCTCAAAACACTGGGGATATTGATCCAGAGTT CCTTGCAGCACTTCCTGCAGATATCCGAGCAGAAGTTCTAGCTCAACAGCAAGCACAGAGGTTGCATCAATCTCAAGAGTTGGAAGGTCAACCTGTAGAA ATGGATACCGTCTCAATAATTGCAACATTTCCTTCAGATATACGAGAAGAGGTTCTGTTAACTTCATCTGATACTATCCTTGCCAATCTTACACCTGCTC TTGTCGCCGAGGCAAACATGTTGCGGGAGAGGTTTGCACACCGTTACAGTCGTAACAACTTATTTGGTCTGCGTCGTAGAGGTGAAGCTTCTAGACGTGG TGAAGGTATTCGTTCTGCCTTGGATGGAGCAAGGGGGGTTGTATATTCACGTAGGTCTAGTGGAGCTAAGGTTGTTGAAGCTGACGGAGCACCTCTCGTT GACACAGAAGCTTTGCATGCCATGATTCGATTGTTTCGGATAGTGCAGCCACTTTATAAAGGTCAATTGCAGAGGCTTCTTTTAAATCTCTGTGCCCATA GTGAAACAAGAACCTCTCTTGTGAAAATTCTGATGGACTTGTTGATGCTTGATGTAAGAAAGCCTGCTTATTACTCTAGTACTATTGAGCCGCCATATAG ATTATATGGTTGTCAGAGCAATGTGATGTACTCACGTCCTCAATCTTTTGACGGAGTTCCCCCATTGCTGTCCCGACGAATACTTGAAACACTCACTTAC CTTGCTCGGAATCATTCATATGTGGCAAAAATTTTGCTTCAGTCTAAGCTGCCGTATCCTGCTATAAGAGAACCAGATAATGCCGATACACGTGGCAAAG CTGTGATGGTTGTTGAGGATGAAATAAATATGGGTGAAAGCAATGAAGGCTACATATCCATTGCAGTGCTTTTAAATCTCTTGAACCAACCACTTTACCT GAGGAGCATAGCCCATCTTGAGCAGCTGCTCAATTTACTGGATGTTACCATTGATAGTGCTGGAAGCAAGTCTAGTTCATCTGACAAATCCCTGATATCC ACTCCTAATCCATCATCAGGTCCTCAAGTTTCAGCTGTGGAGGCAAATGTGAATATAGGTTCGGGTGTTATGCCTTCTGGGGTTGATACATCTAATAAAG TTGATGATGACTCCTCCAAACCCACTTCCTCTGGTGATAATGTGGAATCTGAATCTCAGAGAGTATTGAGTAATCTGCCACAAGCAGAACTTCGACTCTT GTGCTCGTTGCTTGCTCTAGAAGGTTTGTCAGATAAAGCATATGGTATTGTCGCGGAGGTTATGAAGAAGTTGGTAGCCATTGCTCCAACTCATCGTCAG CTTTTTGTCACTGAGCTGGCAGCAGCAGTTCAAAAACTGACTTCATCTGCAAAGGATGAATTACGAGTTTTCAGTGAAACAATTGAATCTCTTCTTAGTA CAACATCTTCTGATGGAGCTGCAATTTTGAGAGTTTTGCAAGCCTTGAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_83993; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_15902
| Blastp | E3 ubiquitin-protein ligase UPL2 from Arabidopsis with 44.37% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase UPL2 from Arabidopsis with 43.39% of identity |
| Eggnog | ubiquitin protein ligase(COG5021) |
| Kegg | Link to kegg annotations (AT1G70320) |
| CantataDB | Link to cantataDB annotations (CNT0001834) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455650.1) |
| Pfam | Domain of unknown function (DUF4414) (PF14377.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |