| Id Trinity | FTRINITY_DN59225_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_15830 |
| Sequence | GAACGTATCAAACTGGTCCGACTTACCGAATACTTTGTGAAGGCGTTAGGTGCAACAAAACCCAAGGCATAAGGTGTTGATCTTTCTTTGAATGCCACCA AAGAAGAACTCAGGAAAAGTTGTTGACATGGAAGGAAGGATGGCGAGTTTCGAAAATGAACTCAACAACCTCAAAATCACAGTGGCAGAATCACAGATGA AAATGGAGGCAAGCTTGGAGAAGATTATGGCAGCTCTGAACCGCGATGATCACATTAAGTCGGTGATGGATGAGGAGAGAACCGAAGAGGGTGGAAGCAT TCATAACACCACACGTGAACATCGTAAGGTGATTGTTTCTGGAACCTCTGGATCCCTAAAGAAGTTGCAGGGAGAAGCCCTTGAGGAGTTCCGACAATCG GTGAAGAAAGTAGAGTTGCCGATATTTCATGGCGATGATCCTGCTGGTTGGATCTCACGTGCAGAGGTGTATTTCAGAATTCTGGACACTAATCCTGAGG TAAGAATTAGCTTGGCCCAACTCTGTATAGAGGGATTCGTCATTTATCCTACAATGAAATTGCTGATCGTAGACAAAGAGGGCTCTGTTTCAAGTGTGGG AATAAATTTCATCCTATGCACCAATGTCCTAATAAGCAGTTGAGAGTCATGGTATTAGAGGAAAACGAAGAAAAAAATGGTGATGAGAACTTTGAAACAG TGGAGCAAGAGGAAGAGGAAGTAGTAGATGGAGAATGCAGTGTTATCAACCTTGGAAGCCTAGAAAGCAGGGAGGGTCGGCAGTTTCAAACGATGAAATT AAAAGGGGAAATCGAAGGGGTACCGATACTGGTGTTGATTGACAGTGGGGCGACACATAACTTTATTTCCAAAAGGTTGATTGAAGCTATGGGAAAACCT TTTGTGGATACAAAAGAGATGACTATGAAGCTTGGCAATGGACATTGCACAACAACTAGGGGGAAGTGTGAGAATATAGAAGTGGAAATTGGCAGAATAA AAATTATAGTTAATGCTCAATTGTTTGAGTTGGGAGACATAGACCTTAGGGGAAATGGTTATTGATTGGGGGAAGAAAATAATGAAGGTGATGATAGAGG GGAGGTCAGTGGAGTTAAAAGGTGAAAGGCATGATTCACATACTGCCTTCCAAAGTTTATTTGCTGAAACTCAAGTATGGGTAGAAGGAATGTACATGTC AACAAGCCTTCAAATATCAGAAACAGTACATGAGGCAGGGGAAGTTAAAAATTTAAATTTAGAGCAACAAACAGAGTTGAAGACTATGTTATCTAGGTTT GTTGAAGTGTTCCAAGAACCTAAAGGGTTACCTCCCAAGAGAAACAGGGAACATGCAATAGTGTTGCTAGAAGGACAAGGTCCAGTGAATGTTGGACCAT ATAGATATCCTCATCATCATAAAGATGAGATTGAAAAACAGGTGAAAGAGATGTTGCAAACAGGAATCGTGAGACCTAGTCAGAGTGCCTTCTCCAGCCC AGTCATATTAGTCAAAAAGAAGGATGCGACATGGCGTATGTGCGTAGATTATCGAGCTTTGAACAGAGCCACTGTCCCCGATAAATTTCCAATCCCGGTT ATTGATGAATTGCTAGATGAAGTACATGGAGCAAAATTTTTCTCCAAATTCGATCTCAAGTCGGGGTACCACCAAATAAGGATGAAGGCAGAGGATGTTC ATAAGACTGCTTTTAGAACCCATGAAGGACACTATGAGTACTTAGTCATGCCATACGGATTGATGAATGCTCCATCTACATTTCAAGCTTTGATGAATGA TGTATTTAGAGAAATGTTGAGGAAGTGGGTTTTAGTGTTCTTTGATGACATCCTAGTGTATAGTTCAAGTTGGGAAGAGCATTTGCAACATTTAACTATG GTATTTGAAAAATTACAGCAACATCAACTAGTAGCAAACAAGAAAAAATGTCAGTTTGCTCAATTTGCGATTGAGTACTTGGGACACATAGTTTCAAAGG AAGGGGTAGCAATGGATCTGCCTAAAGTGGAGAGTGTGTTGAATTGGCCAATTCCAAAGTCAGTAAAAGGGGTAAGAGGATTCTTGGGCCTTACAGGGTA TTATAGGAAATTCATCAAAGACTATGGCAAGATTGCTAGGCCATTAACTGAGCTGACAAAGAAGGAAGGTTACCATTGGAATGCCAAGGCCCAAGAAGCT TTTGAGGGACTCAAGAAGGCTATGGTTGAAGCTCCTGTGTTGACACTTCCAGACTTCAACAAGGAATTCTTGATTGAGAGTGATGCTTCAGGAGGAGGAG TAGGAGCAATACTAATCCAACAAGGGAAACCTATAGCTTACTTCAGCAAGGCATTTGGGGTAAGCAATCTCTCCAAATCTGCTTACGAAAAAGAATTAAT GGCAGTGGTACTAGCAATTCAACATTGGAGGCCATATTTGGTTGGGAGAAAATTTACGGTGTGTACAGACCAAAAGAGTTTGAGACAATTATTGCAACAA AGAATCACAACAATGAGCCAACAAAATTGGATGTCTAAGCTTTTAGGCTACCAATTTGAAATTATTTACAAACAAGGAGTTGAAAATAGAGGAGCAGATG CCTTATCCCGATTGCATGAGGAGGGTGGTTCTTTTTGCTATATTAGAATGTTCCGACTTGGAGAGACATCAATGCTATAATGGCTGAAGTACATGAAGAT GAGAATTTGAGATCAATTGTGGAAGAATTGGAGGCAGGAAAAGAGACGAAACCCGACTTTGTTTATACTAATGGAGTTCTTATGTTTAAGGGAAGATTGG TCATTTCTGCAACATCTAAATGGATCCCTCAATTGCTACAAGAGTACCATTCTACTCTTCAAGGTGGACATTCTGGATTTTATAGAACATACCGTTGCGT GGCTACCAATCTTTTCTGGTTTGGAATGAAGAAAATGGTCCAAGATTTTGTGCAGCGATGTGATGTGTGTCAAAGGCAAAAATACTTAGCTACCACTCCT GGGGGTTTATTGCAACCACTACCGATTCCAGATCAGATATGGGAGGAAGTCTCTATGGATTTTATAACAGGACTTCCGGAGTCCAAAGGATTTGAGGCAA TCTTAGTTGTGGTGGACAGATTGTCAAAGTATAGTCACTTTGTGCTGCTGAAACATCCTTACCCAGCAAAGGCAATTGCTGAAATTTTTGCCAAGGAGGT GGTTAGACTACATGGGATCCCGAAAGCCATTGTTAGTGACAGGGATCCCATATTTGTTAGTAACTTTTGGAAAGAACTTTTTAAAATGCAGGGGACCCAA TTAAAAATGAGCACTGCCTATCATCCGCAAACTGATGTTCAAACCGAAGTTGTGAACAGATGTTTAGAGACATTTTTAAGATGTTTTATTGCTGACCAAC CTAAGACATGGATCTACTGGTTGCATTGGGCAGAGTATTGGTATAACACTACTTTTCAACAATCAATTGGAATGACACCATTTGAAGTGGTATATGGGCG GAAGCCTTCTCTTCTAAATCGTTTTGTGCAGGGTGAAACTCTAGTTGAAGCTGTCCAAAGAGAGCTCATGGATCGCGATGAAGCACTGCGACAATTGAAA CAACACTTGGTCAGAGCACAGGGCAGAATGAAGAACCAAGCAGATTCGAAGAGGCAAGAAAGGAGTTTTGAAGTGGGAGAATTGGTCTTTCTGAAACTCC GTCCCCACAGGCAAGGTTCTGTGGTGACTCGAATCAACCCAAAGTTGGCTGCCAGGTTCTATGGACCTTTCCAAGTCATTGAGCGTGTAGGAACAGTGGC TTATAAATTGAAGTTACCAGAAACATCACGAATTCACCCTGTGTTTCATGTATCGTTACTTAAGAAAGCTGTGGGGGACTACAAGATTGAAACCGAGTTG CCGGTGGGTATGGATGGAGAACAAGGAGAAGAATTAGAACCTGCAATAGTTCTTGCATCTAGACAGGTTAATAAGAGTGGAGAAAGTTTGCAGCAAGTCT TAGTGCAATGGAAAGGGCAGTCCTCAGAGAATGCAACATGGGAGGATATTTATTCTATGAAAAGTCAGTTTCCTCAATTCAGTCTTGAGGACAAGACTGT CCTATAGGAGTGATAGAATCTTAGATGTGGAGAGAGGTCAACTCATTGACCAGTTGAGCCATGGGCCAAAGATTTGGAAAGTGTATTCTAGAAGGGGCAG AAAAGAGATATGATATCTATGATGATGTGGAAGTGAGAGAAGATACATTTGCACAAAGGGAGTTACAATATTGAAAGTGACTTTACTGTTATATATGAGT GAGTGGGAGAGGAAATGGCATCTTTTGTAATGATGGGAAACTGATAGGACAGAGAACGTTTCATTCTCTGTAGGAGCTGAGCTCTGTGGGTAGTAGAAGA AATTCTACTGCATCTTTATTTTCTTCTGCTTTCAATAATCAGTTTGCTTTTCTCTTTTTTCCCTCTTTTTGTGTTTCTCTTTGTGACTTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_84002; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_15830
| Blastp | Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 41.56% of identity |
|---|---|
| Blastx | Transposon Tf2-9 polyprotein from Schizosaccharomyces with 32.78% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020207083.1) |
| Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF00078.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |