Id Trinity | FTRINITY_DN59230_c2_g2_i6 |
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Name Transcript | Ll_transcript_13503 |
Sequence | TTGTTGCAAGCTACGGTAACAACATAAACGAGCCCTAAAAGAATTTACTTGACATCACACTAAATCCTTTTTAACATAGACCTGCATGTGGTAATTCAAC TTTTGTTTTGGTTTGACTCACCAGGGATTTAAACATGGAATTTAAATGTGTCAAGAAACATTTCTGTTATTGTTATTCTGACCTTGCAATTTGATTCAGG CCTTGTGTGTGATCGAGGACTCACTCTCTGTGACTTAATCGGAGTATTGCATGATTTCTTCTCACGCATGGGCATGACCAAGTTGAAGTTCAAACCAGCA TATAACCCTTACACTGAACCTAGCATGGAGATTTTCAGTTATCATGAAGGCTTTAAAAAATGGGTAGAGGTTGGAAACTCTGGCATGTTCAGACCTGAAA TGTTGCAGCCAATGGGTCTTCCTGAAGATGTTCAAGTTATTGCATGGGGTCTTTCCCTTGAAAGACCAACTATGATACTATATGGGATAGATAACATCAG AGATCTCTTTGGACACAAGGTGGATTTAGGACTTATGAAGAAAAATCCAATTTGTCGTCTTGGAATTGAATAAAGAATAATCTATTGGCTTTCTTTTGTT TTAAAAATTACTATATCATTATTTTTTTGGAATTCTGGAAGGTCAAATAATACTGTAGATTATTTCAATTCTGTATGAAGAATTTTGATATGGAAGTTAC CTTTTTATTGGAAGGATTATAAACCTGGAATAGTATTTTTCTTGTTTTGGAAAACAGTCATGATTAAGAAAGTTGCCCCATTCCATTGCCCAAGAGTGTC ATAAGTTGTGATTTTGTGACAATTCCTTCACACACAAAAATGTAGCTAAAGATGCTTGTTAGACAATGGCATTTTCATGAAACACTCG BLAST |
Tissue | flowers |
Gene name | LI_gene_84068; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_13503
Blastp | Phenylalanine--tRNA ligase alpha subunit, cytoplasmic from Arabidopsis with 88% of identity |
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Blastx | Phenylalanine--tRNA ligase alpha subunit, cytoplasmic from Arabidopsis with 79.58% of identity |
Eggnog | phenylalanyL-tRNA synthetase, alpha subunit(COG0016) |
Kegg | Link to kegg annotations (AT4G39280) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413281.1) |
Pfam | tRNA synthetases class II core domain (F) (PF01409.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |