Id Trinity | FTRINITY_DN59237_c1_g3_i2 |
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Name Transcript | Ll_transcript_16284 |
Sequence | AATTTATTGAATTTTTTGATGTTAGAGCAGCAGATGCTGCTCTTAAAGCATTAAATCGAATTGACATTGCAGGGAAGCGCATCAAACTTGAACCCAGTCG CCCTGGTGGAGCACGACGAAACTTGATGCAACAAATGACTGAGCTGGAGCAAGATGAAACTCGAACTTTTAGGCATCAAGTGGGTTCACCTATTGCCAAT TCTCCTCCTGGAAATTGGGCACACTTTGGGAGTCCAGTCGAACATAATCCATTGGGTTCTTTTAGCAAATCTCTCGGTTTGAGTTATGGCAGCCCTTTGA ATACCAGCCATTTGCCTGGATTAGGAGCAATTCTTTCTCCACACGCGTCAACCTCTCCAAAGATTGCACCAATTGGTAAGGACCTTGGAAGGGCTAATAA TGGAAATCAAATTTTTGCAAGCTCAGGATCTTCACAAGGAGCGGCTTTTCAGCCTTCTATGTCCTTTCCCGAGCATAAATTAAATTCTAGCCCTAGGCCT ATATCTACTTTTGGTGAATCAAAGTCAAGTTCTTCAAGTGTTGGAACACTGTCTGGTCCTCAATTTCTGTGGGGAAGTCCTACTCCTTACTCAGAGCATT CAAACACATCTGCCTGGTCTTCAACTTCCCGGGGGCTTCCATTTACTTCTAGTGGACAAAGGCAGGGTTTCCAATATACTAGTCGGCACAATTCGTTTCT TGATTCTCACCCACATCATCATGTGGGATCCGCTCCATCTGGCCTTCCTTTGGATAGGCATTTTAACTACTTTCCAGAGTCACTTGAAACTTCTGTCAAG AGTTCAGTTGCATATGGAAGTTTGAATCATAGCAATGATAATTTTTTTATGAATATGGGTGCTCGTGCATCTGGAGGAGTTGTTGCTGGCTTTCCAGGAA ATAGGACTGAAATTAGTTCACCTAATTTCAGAATGATGTCACTGCCTAGGCATGGATCCTTGTTCCTTGGAAATGGTTTGTATTCTGGACCAGGAGCAAC AAACACTGAGGGATTAACTGAACGTGGTCGAAGTAAGCAACCTGACAATAGTGGGAACCAAATTGATAGCAAGAAGCAGTACCAGCTTGATCTAGACAAA ATTATGAGGGGAGAAGACACAAGGACAACATTAATGATTAAAAACATTCCTAACAAGTACACTTCAAGTTTGCTGCTTGCTGCTATTGATGAGAATCACA AGGGTAGTTATGACTTCCTCTATTTGCCAATTGACTTTAAGAACAACTGCAACGTGGGCTATGCTTTCATCAACATGGTGTCTCCTTCACACATCATCCC CTTCTACAAGGCATTTAATGGGCAGAAGTGGGAGAAGTTTAAT BLAST |
Tissue | flowers |
Gene name | LI_gene_84152; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_16284
Blastp | Protein MEI2-like 2 from Oryza sativa with 52.07% of identity |
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Blastx | Protein MEI2-like 2 from Oryza sativa with 51.52% of identity |
Eggnog | Rna-binding protein(ENOG4111R9F) |
Kegg | Link to kegg annotations (4330544) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019435216.1) |
Pfam | RNA recognition motif 2 (PF04059.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |