| Id Trinity | FTRINITY_DN59237_c1_g3_i8 |
|---|---|
| Name Transcript | Ll_transcript_16293 |
| Sequence | AATTTATTGAATTTTTTGATGTTAGAGCAGCAGATGCTGCTCTTAAAGCATTAAATCGAATTGACATTGCAGGGAAGCGCATCAAACTTGAACCCAGTCG CCCTGGTGGAGCACGACGAAACTTGATGCAACAAATGACTGAGCTGGAGCAAGATGAAACTCGAACTTTTAGACATCAAGTGGGTTCACCTATTGCCAAT TCTCCGCCTGGTAACTGGGCACACTTTGGGAGTCCAGTTGAACATAATCCATTAGGTTCTTTAAGCAAATCTCCCAGTTTGAGTTATGGCAGCCCTATCA ATACCAGCCATTTGCCTGGATTAGGAGCAATTCTTTCTCCACATGTGTCAACATCTCCAAAGATTGCACCAATTGGCAAGGACCCTGGAAGGGCTAATAA TGCAAATCAGATATTTGCAAGCTCTCGATCTTCACAAGGAGCGGCTTTTCAGCATTCTATGCCCTTTCCAGAGCATAAAGTGAATTCTAGCCCTAGGCCT ATATCTACTTTTGGTGAATCAAAATCAAGTTCTTCAAGTGTTGGAACACTGTCTGGTCCTCAATTTCTGTGGGGAAGTCCAACTCCTTACTCGGGGCATT CGAACACATCTGCCTGGTCTTCAGCTTCTGGGGGGCTTCCATTTTCTTCTAGTGGACAAAGGCAGGGTTTCCCATATACTACTCGGCACAACTCATTTCT TAACTCTCATCATCACGTGGGATCTGCTCCATCCGGCCTTCCTTCTGAGAGGCATTTTGGCTACTTTCAAGAGTCACCTGAAACATCTGTCAAGAGTTCA GTTGCATATGGAAGTTTGAATCACAGCGATGGGAATTTTTTTATGAACATGGGTGCCCGTGGATCCGTAGGAGCTGGTGTTGGCCTTCCAGGAAATATGA CTGAAATTAGTTCACCTAATTTCAGAATGATGTCACTGCCTTTGCATGGTTCCTTGTTCCTTGGAAATGGTATGTATTCTGGACCAGGAACAACAAACAC AGAGGTATTGGCTGAACGAGGTCGAAGTAAGCGACCTGACAATAGTGGTAACCAGATTGATAGCAAGAAGCAGTACCAGCTTGATCTGGACAAAATTATG ACGGGAGAAGACACAAGGACAACTTTAATGATTAAAAACATTCCTAACAAGTACACTTCAAGTCTGCTGCTTGCTGCTATTGATGAGAATCACAAGGGCA GTTATGACTTCCTCTATTTGCCAATTGACTTTAAGGTATACTCATACTTTACATCTACCTGGTGACCTTTGATTCTCCGGTATGACATTTCTTAAGGTTT TTTTTGTTTGCAGAACAAGTGCAACGTGGGTTATGCTTTCATCAACATGGTGTCTCCTTCATACATCATCCCCTTCTATAAGGCATTTAATGGGAAGAAG TGGGAGAAGTTTAACAGCGAAAAAGTTGCTTCACTGGCATATGCCCGTATCCAGGGGAAGAGTGCCCTTGTGACACATTTTCAGAACTCAAGCCTAATGA ACGAGGATAAGCGGTGCCGGCCAATTCTCTTCCATTCAGAGGGCCAAGAGATTGGTGACCAGGAACATTTCCTGTCAAGCAATCTGAATATATGCATTCG CCAACCGGATGGTTCTTACTCAGATGATTTGTTGGAGAGCCCGAAGGGCAATTCGACCGAAAAGCTATGTTAGATATCTTGTTCCTAGCCGCAATGGCTT GTAGGAGAAGTAAGCCAACTAGTACATAGCTAATCTTAATGTGTACAAAGGCATGAGTCTCAATATGTTAATAGTTCATAATGATGGTAAAAGGCAATGT GTAGAGAAGCAATTGTAATTTAACCAGCGGAAAAGAATAAGGTGGGGTGAGTGTATTTGTGGATTGTGAGTTTCATGTGAAATTGATTCTGAGTGAGGTT TGTTGTGGCTGTAATGGCCCATTGCAGATATGAATAATGTTTATGAAAGTTGTATATAAGGGAAACAAGGATCTGATGTGTCTATGATGATGTATATCCT AGTTATTTATGTCTATCATAATATTATTAATGTACATTTCCTGATACAGATTAAATAATCAACATTACTACAACTAGAATTGTCACTATCATTCCAATTA TGAATGTTTTTATCCATATCCGTTAAAATTTGGTCTTCACTTACACCGGTATTTTCAATAGGACCAAAACGATTCGTTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_84152; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_16293
| Blastp | Protein MEI2-like 2 from Oryza sativa with 50.59% of identity |
|---|---|
| Blastx | Protein MEI2-like 2 from Oryza sativa with 51.99% of identity |
| Eggnog | Rna-binding protein(ENOG4111R9F) |
| Kegg | Link to kegg annotations (4330544) |
| CantataDB | Link to cantataDB annotations (CNT0002248) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456371.1) |
| Pfam | RNA recognition motif 2 (PF04059.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |