Id Trinity | FTRINITY_DN59238_c3_g1_i1 |
---|---|
Name Transcript | Ll_transcript_15547 |
Sequence | ATCTCTATCTACAAGCACTAACTCCAACGTCTCTTGTTTTTCTCCCTTTCTCTTTCCTCTTTCTCCCTCGCGCCCATTTCGCTTTCTCTCTCTAACTCCG CTTCTCTCTCTACTTTCTCTCTCTAACTCCGATTCTCTCTCTACTTTCTCTCTCTACAATCTCTCTCCCGTTTCTCTCTCATTTCCAACGGATCAACGAT CCGAACTCAACGATTCAATCTGAACGGTTCACGAAGCTGGAATCTTCTACAAGCATTCGTTAACTCATTTTATATTGGTGTGTGGATTGAGTTTTCATAA TTTGAATGAATACCTGTTAGTCTCTTCATAAATAACATAATGGAAGATGAGGAAGAATCAAAAGAGCTGAAAATATCTGGTAATGATATAGATACTCCTG AAGTAGTAGATAGTGGTGAAAAACAATTTGTTGAGAGTCCTCATCAGGAAAATGTAAATGGCACAAGCAATATTGGCGCTGAACCTATAGATGAAAGGGT ACATTTGCAAGGACTCAGTATTGACTCTGCAACGACATCTATGCATGAGGACCAGTTTGAGCATGTGTCCTTGATAGATCAAGACAAGAATAATATTAAT GAGTATGTAGATTTAAACCGTTCATCAGGTTCTGCTAATATACAACACTCATTTAGTGGAAATGCAGAGGATTCTCAAGGTTCACCTGGATCATACTTGA TAGAACATGATTCTTCACAAGGTTCTGACATGCAACATGATCATCTTTCTTATAGCCCTGGGTCAGAAGGGAGTTTAGGTCACACAAGGAAGCAGTCTGC CTCATCATTTAGTTTTGATTCTGCTGGATACTCTACTGCTGATTCTCTACCAAAGCCTAGGCAAAAGCATGCTAAGCCAAACGTGTCTCCAGAATTACTG CATTTAGTTGATTCAGCTATTATGGGAAAAGTTGAAGGTATGGATAAGCTGAAGAATATTGCAAGTGGGGCAGAAATTTTTCAGAGTGATGAAGAAATGG ATAGTGTGCCTTTTGTAATAGTAGATTCCCTTCTTGCAACAATGGGTGGTGTTGAAAGTTTTGAAGAGGATGAAGATGATAATCCTCCTAGTGTAATGCT GAACTCCCGAGCTGCTATTGTGGCAGGTGAACTTATTCCTTGGCTTCCTTATGTAGGTGATACTGACAATGTCATGTCACCAAGGACACAGATGGTTCGT GGACTACTTGCTATATTACGGGCTTGCACTAGAAACAGAGCAATGTGCTCAACGGCTGGTCTGTTAGATATATTGTTGAGAACAGCAGAGAAGATTTTTA CAATGGATGTTGACTTAAATGGGCAAATGAGGTGGGATGGAACTCCTTTGTGCCACTGCATACAATACTTAGCTGGCCATTCTCTTAGTGTTAGTGATCT TCATACATGGTTTCAAGTCATTACAAAAACCCTCACCACAATTTGGTCTCAGCGGTTAATGCTAGCATTGGAGCAAGCAATAAGTGGAAAGGAGTCAAGA GGACCAGCTTGCACCTTTGAGTTTGATGGTGAAAGCTCTGGTTTGCTTGGTCCAGGTGAAAGCCGTTGGCCATTTATCAATGGGTATGCTTTTGCAACAT GGATCTACATTGAGTCATTCGCAGACACATTGAATACAGCTACAGTTGCTGCTGCAATTGCTGCAGCTGCAGCGGCTAGGTCTGGTAAATCATCAGCTAT GTCAGCTGCCGCTGCTGCTAGTGCACTTGCTGGTGAAGGTACAGCCCACATGCCACGACTATTTAGTTTTTTATCTGGTGATAATCAGGGTATAGAGGCT TATTTTCATGCTCAATTTTTGGTTCTTGAAACTTCTAGTGGAAAGGGAAAGAAGTCTTCTTTGCATTTTACCTACCCTTTCAAACCACAATGTTGGTACT TCATTGCCCTTGAACATATTAGCAAGCATGGAATTCTTGGGAAATCAGAAAGTGAAGTTAGGTTATATGTAGATGGATCTTTATATGAAAGTCGTCCCTT TGACTTCCCTAGAATTTCGAAATCCCTTGCATTTTGCTGCATAGGAACTAACCCTCCTCCTACTATGGCGGGTTTGCAACGCCGACGTCGTCAGTGCCCT TTGTTTGCTGAGATGGGCCCTGTTTACATCTTCAAGGAACCAATTGGCCCAGAAAGAATGACACGCTTGGCTTTTAGAGGAGGGGATGTAGTTCCTTCTT TTGGTACTGCAGCGGGGCAACCATGGCGATCTACAAATTCTCATGTACAGAGCATGGCAGAGGAAAGTGTTCTTTTGGATGCAGAAATTGGAGGTTGCAT TCATCTGCTGTATCATCCTAGTTTGCTCAGTGGGCGTTTTTGCCCAGATGCTTCACCTTCTGGTGCTGCAGGAATGCTTCGACGCCCGGCTGAGGTTCTT GGGCAAGTCCATGTTGCTACACGAATGCGACCTGTGGATGCTTTGTGGGCATTGGCCTATGGTGGTCCCTTGTCTTTGCTTCCCTTGACAGTAAGCAATG TACTCGAGGATACTTTGGAACCAATTCAAGGGGATTTGCTTCTGTCTTCAGCCACTACATCTCTTGCTGCCCCAATAATTCGAATTATATCCATGGCTAT TCAAAATCCAAAGAACAATGAAGAGTTGTCTCGTGGTAGAGGGCCTGAGGTTCTGTCAAAAATTTTGAATTATCTTCTCCAAACCTTATCAGGCTTATCT TTGCATGATGTTAGAAAGCATGATGGTGGAAGAGACGAGGAACTCATTGCTGCTGTTGTCTCCCTTTGTCAATCTCAGAAGATGAACCATACACTTAATG CACAACTCTTCACCACACTGCTGTTAGATTTAAAAATTTGGAGTTTGTGTAGTTATGGCATACAAAAGAAGCTCATATCATCACTTGCAGACATGGTTTT CACAGCGTCAAGAGTAATGCGAGATGCTAATGCCATTCAGATGCTTCTTGATGGCTGCAGAAGATGTTATTGGACTGTTCCTGAAATTGACTCGTTGAAT ACTTTTTCTCAAACAAGGGAAGCACGTCCTGTAGGTGAAATCAATGCTTTGGTTGATGAGCTCTTAGTGGTAATTGAACTTCTAATAGT BLAST |
Tissue | flowers |
Gene name | LI_gene_84170; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_15547
Blastp | BEACH domain-containing protein C2 from Arabidopsis with 68.33% of identity |
---|---|
Blastx | BEACH domain-containing protein C2 from Arabidopsis with 68.2% of identity |
Eggnog | beige BEACH domain containing protein(ENOG410XNQC) |
Kegg | Link to kegg annotations (AT2G45540) |
CantataDB | Link to cantataDB annotations (CNT0001256) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019412872.1) |
Pfam | Domain of unknown function (DUF4704) (PF15787.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |