| Id Trinity | FTRINITY_DN59240_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_16141 |
| Sequence | AAGTTTGATGTCCTTTTGACATCATATGAGATGATCAACTTGGACACAACTTCATTGAAACCTATAATATGGAATTGCATGGTAGCATTCTACTTTCCAT TGCAGTACCAGAACAAAAAAAAAATGAATTTACCAGTTGCCTCTATTACTTCTATTCTCGTTCGTGCTTAATGCTGACAGCCTGTCATATGTATTCAGAT AGTTGATGAAGGTCACCGTCTCAAAAACAAGGATTCAAAATTATTTTCTTCATTGAAGCAGTACTCTACTAAACATCGTGTGCTCTTGACTGGGACTCCT CTTCAGAACAACCTGGACGAACTTTTCATGCTTATGCACTTCCTTGATGCTGGGAAGTTTGGAAGTTTAGAGGAGTTCCAGGAAGAGTTTAAGGATATCA ATCAAGAGGAACAAATTTCAAGGCTTCATAAAATGTTGGCCCCACATCTGTTGCGAAGTATACATCTTAATCTTGAAGAAGTGGCACAATTTGATGTCAT TTTATTGCTTGGATTACTATTAACTCAACATTTGTGTTATAGCACTGAGCCTATTGATTTATGCTATTTCTTGTGCAAGTTTTGTGTTGTCAATCTATGT TTCTTGCTTGAACTATGGTGAACTTGTTTCTTGCTGATGGCAATAGTCAGATTTTATGATACTGCATTGCAATTTGTCAAATTTACAAGATCATTGAGTA CTGAGAAACAAGTCTTTCTCAAAATATCATATCGGAGACACCTTTTTTTTAATATTCAATTCAAGAGCATATATCTTATAAAGCTTCTAAATCTATAAGC TGCTCATTTTTTCAAGATTTAGGTGACATTTATTTTGATCCTCGCTCAATCTGTCTAAATGTTGTTCTTGTAGAAGTTTTAGTCTCTGCAATCACTTTGG GGGAAGTGGTAGGATCCTAGAAGAAGTTGTGGGTCTTGGTATGTATATAGGAGTACGTCCTGATCTCAACCAGATAAAGAGTGATTAGCATTTATTAGAA CATTGAATGGTCCACATATTGGAATTGGATCATGTAAATTTCTTATTCTCTTGCTTTTCTTGTAGAGAGAAAATGTTGTTTGATTGCTGAAGAACCGTAT ATTGTTCGGCTCCTTTATATTGAAGTGTACGCGATACTATATATTCTGATGATTTAACTTGGTAGTTTTGGTTTCAGCATTTACGGAATTTTCAACTGGG CCCTCAGAGGCATACTATATCTGATAATTCTGTGGTTCTTATAGTAGTTGGTAATTTGTATATAAAAAAGTGTACTGCAGAGTCGTGGATTAAATTTTTT AATGCACTTGCAGGGGTGAAGAAAGATGTCATGAAGGAACTACCTCCTAAAAAAGAACTTATTTTACGTGTTGAATTGAGCAGCAAACAGAAAGAATATT ACAAGGCAATTTTGACCCGCAATTATCAGATATTAACTCGCCGTGGCGGTGCACAGATTTCTCTTATCAATGTTGTTATGGAACTGCGTAAGCTCTGTTG TCATCCTTACATGCTAGAAGGAGTTGAACCAGATATTGGAGATGCGAATGAATCATTCAATCAGTTGCTAGAAACATCAGGGAAGTTGCAATTGCTGGAC AAGATGATGGTGAAGCTTAAAGAGCAAGGACATAGAGTCCTGATATATTCCCAATTTCAGCACATGCTTGACTTGCTTGAAGATTACTGTTCTTATAAGT GATTGGAATCCACATGCTGATCTACAAGCTATGGCTAGAGCTCATCGACTCGGACAAACTAACAAGGTGATGATTTTTAGGCTTATAACGCGAGGCACGA TTGAAGAAAGGATGATGCAGTTGACAAAGAAGAAAATGGTGTTAGAACATGTAGTAGTAGGGAGGCTAAAGGCTCAAAATATTAACCAGGAAGAGTTGAA TGATATTATAAGTTATGGTTCAAAGGAGTTATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_84187; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_16141
| Blastp | CHD3-type chromatin-remodeling factor PICKLE from Arabidopsis with 82.93% of identity |
|---|---|
| Blastx | CHD3-type chromatin-remodeling factor PICKLE from Arabidopsis with 82.44% of identity |
| Eggnog | helicase activity(ENOG410XNUT) |
| Kegg | Link to kegg annotations (AT2G25170) |
| CantataDB | - |
| Mirbase | aly-MIR862 (MI0014628) |
| Ncbi protein | Link to NCBI protein (XP_019437788.1) |
| Pfam | SNF2 family N-terminal domain (PF00176.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |