Ll_transcript_16149

• Id Trinity: FTRINITY_DN59240_c1_g1_i4
• Name Transcript: Ll_transcript_16149
• Sequence: ACTCCTCTTCAGAACAACCTGGATGAACTTTTTATGCTTATGCACTTCCTTGATGCTGGGAAGTTTGGAAGTTTAGAGGAGTTCCAGGAAGAGTTTAAAG ATATTAATCAAGAGGAACAGGTCCTGAGGCTTCATAAAATGTTGGCCCCACATCTTCTGCGAAGAGTGAAGAAAGATGTCATGACAGAACTACCTCCTAA AAAGGAACTTATTTTACGTGTTGAGTTAAGCAGCAAGCAGAAAGAATATTATAAGGCAATTTTGACTCGTAATTATGAGATATTAACTCGCCGTGGTGGT GCACAAATTTCTCTTATTAATGTTGTTATGGAACTGCGTAAGCTCTGCTGTCATCCCTACATGTTTGAAGGAGCTCAACCACATCTTGACGATACAGATG AAGCATTCAAACAGCTGCTGGAGACTTCGGGTAAGTTGCAATTGTTGGACAAGATGATGGTGAAGCTTAAAGAGCAAGGACATAGAGTCCTCGTATATAC CCAATTTCAGCACATGCTGGACTTGCTTGAAGATTATTGTTCTTACAAGAATTGGTATTATGAAAGAATAGATGGCAAGGTTGGTGGAGCTGAAAGACAA ATACGGATCGATAGATTTAATGCCAAAAATTCTACAAGATTTTGTTTTCTTCTTTCTACTAGAGCTGGTGGTATTGGGATAAACCTTGCAACAGCTGACA CAGTTATTATATATGACAGTGACTGGAATCCACATGCTGATCTGCAAGCTATGGCTAGAGCTCATCGACTTGGGCAGACTAACAAGGTGATGATTTTTAG GCTAATAACAAGAGGAACAATTGAAGAAAGGATGATGCAGTTGACAAAGAAGAAAATGGTGTTAGAACACCTAGTAGTAGGAAAGCTAAAGGCTCAAAAT ATTAACCAGGAAGAGTTGAACGATATCATAAGCTATGGTTCAAAGGAGTTATTTGCTGATGAGAATGATGAAGCAGGCAAATCTCGCCAAATTCATTATG ATGATGCTGCCATAGACAGATTGCTGGATCGTGATCAAGTTGGACAAGAAGAGGCTAATTTGGACAATGAAGACGAAAATGGATTTCTGAAGGCCTTTAA GGTGGCGAATTTCGAGTACATTGATGAAGTTGAGGCTGCAAAAGAGGAGGCCCGGAAA
• Tissue: flowers
• Gene name: LI_gene_84187;
• Additional information: details;

Expression of Ll_transcript_16149

FPKM

• FPAB: 16.1
• FPNAB: 21.8
• LF1: 19.1
• LF2: 18.2
• LF3: 19.4
• LF4: 12.2
• UF1: 13
• UF2: 15.7
• UF3: 17.8
• UF4: 7.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_16149

• Blastp: CHD3-type chromatin-remodeling factor PICKLE from Arabidopsis with 85.23% of identity
• Blastx: CHD3-type chromatin-remodeling factor PICKLE from Arabidopsis with 85.23% of identity
• Eggnog: helicase activity(ENOG410XNUT)
• Kegg: Link to kegg annotations (AT2G25170)
• CantataDB: Link to cantataDB annotations (CNT0000497)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447576.1)
• Pfam: SNF2 family N-terminal domain (PF00176.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;